RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 KIF6Q6ZMV9 814 aa22.94■■□□□ 1.26
TRAPPC4-203ENST00000447216 ANKRD36CQ5JPF3 1778 aa22.94■■□□□ 1.26
TRAPPC4-203ENST00000447216 ADCY9O60503 1353 aa22.93■■□□□ 1.26
TRAPPC4-203ENST00000447216 F6X3S4 739 aa22.93■■□□□ 1.26
TRAPPC4-203ENST00000447216 ADRA2BP18089 450 aa22.93■■□□□ 1.26
TRAPPC4-203ENST00000447216 COL23A1Q86Y22 540 aaPredicted RBP22.93■■□□□ 1.26
TRAPPC4-203ENST00000447216 SUPT16HQ9Y5B9 1047 aaKnown RBP22.93■■□□□ 1.26
TRAPPC4-203ENST00000447216 AFDNP55196 1824 aaKnown RBP22.93■■□□□ 1.26
TRAPPC4-203ENST00000447216 PTPRCP08575 1304 aa22.92■■□□□ 1.26
TRAPPC4-203ENST00000447216 MAP3K15Q6ZN16 1313 aa22.92■■□□□ 1.26
TRAPPC4-203ENST00000447216 PI4KAP2A4QPH2 592 aa22.92■■□□□ 1.26
TRAPPC4-203ENST00000447216 MSH5O43196 834 aa22.92■■□□□ 1.26
TRAPPC4-203ENST00000447216 CAMTA2O94983 1202 aa22.92■■□□□ 1.26
TRAPPC4-203ENST00000447216 RFC4P35249 363 aa22.92■■□□□ 1.26
TRAPPC4-203ENST00000447216 ANKRD13DQ6ZTN6 518 aa22.92■■□□□ 1.26
TRAPPC4-203ENST00000447216 PI4KAP1Q8N8J0 262 aa22.92■■□□□ 1.26
TRAPPC4-203ENST00000447216 DDX58O95786 925 aaKnown RBP22.91■■□□□ 1.26
TRAPPC4-203ENST00000447216 HLFQ16534 295 aa22.91■■□□□ 1.26
TRAPPC4-203ENST00000447216 ZKSCAN2Q63HK3 967 aa22.91■■□□□ 1.26
TRAPPC4-203ENST00000447216 KSR2Q6VAB6 950 aa22.91■■□□□ 1.26
TRAPPC4-203ENST00000447216 RIC3Q7Z5B4 369 aa22.91■■□□□ 1.26
TRAPPC4-203ENST00000447216 PLBD2Q8NHP8 589 aa22.91■■□□□ 1.26
TRAPPC4-203ENST00000447216 MAP3K2Q9Y2U5 619 aa22.91■■□□□ 1.26
TRAPPC4-203ENST00000447216 SOCS7O14512 581 aa22.9■■□□□ 1.26
TRAPPC4-203ENST00000447216 IPO8O15397 1037 aaKnown RBP22.9■■□□□ 1.26
TRAPPC4-203ENST00000447216 RRP1P56182 461 aaKnown RBP22.9■■□□□ 1.26
TRAPPC4-203ENST00000447216 USPL1Q5W0Q7 1092 aa22.9■■□□□ 1.26
TRAPPC4-203ENST00000447216 NARFQ9UHQ1 456 aa22.9■■□□□ 1.26
TRAPPC4-203ENST00000447216 N4BP2Q86UW6 1770 aaPredicted RBP22.89■■□□□ 1.26
TRAPPC4-203ENST00000447216 USP42Q9H9J4 1324 aaKnown RBP22.89■■□□□ 1.26
TRAPPC4-203ENST00000447216 ZPR1O75312 459 aa22.89■■□□□ 1.25
TRAPPC4-203ENST00000447216 TRIM27P14373 513 aa22.89■■□□□ 1.25
TRAPPC4-203ENST00000447216 ATF7IPQ6VMQ6 1270 aa22.89■■□□□ 1.25
TRAPPC4-203ENST00000447216 FLAD1Q8NFF5 587 aa22.89■■□□□ 1.25
TRAPPC4-203ENST00000447216 CLUAP1Q96AJ1 413 aa22.89■■□□□ 1.25
TRAPPC4-203ENST00000447216 API5Q9BZZ5 524 aaKnown RBP22.89■■□□□ 1.25
TRAPPC4-203ENST00000447216 R3HDM1Q15032 1099 aaKnown RBP22.88■■□□□ 1.25
TRAPPC4-203ENST00000447216 DNAAF4Q8WXU2 420 aa22.88■■□□□ 1.25
TRAPPC4-203ENST00000447216 ARHGAP45Q92619 1136 aa22.88■■□□□ 1.25
TRAPPC4-203ENST00000447216 PDGFDQ9GZP0 370 aaPredicted RBP22.88■■□□□ 1.25
TRAPPC4-203ENST00000447216 BCL2L12Q9HB09 334 aa22.88■■□□□ 1.25
TRAPPC4-203ENST00000447216 CASZ1Q86V15 1759 aa22.87■■□□□ 1.25
TRAPPC4-203ENST00000447216 ERVV-1B6SEH8 477 aa22.87■■□□□ 1.25
TRAPPC4-203ENST00000447216 SLC4A10Q6U841 1118 aa22.87■■□□□ 1.25
TRAPPC4-203ENST00000447216 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.87■■□□□ 1.25
TRAPPC4-203ENST00000447216 PSDA5PKW4 1024 aaPredicted RBP22.86■■□□□ 1.25
TRAPPC4-203ENST00000447216 GIGYF2Q6Y7W6 1299 aaKnown RBP22.86■■□□□ 1.25
TRAPPC4-203ENST00000447216 MYD88Q99836 296 aa22.86■■□□□ 1.25
TRAPPC4-203ENST00000447216 RNF123Q5XPI4 1314 aa22.85■■□□□ 1.25
TRAPPC4-203ENST00000447216 RLBP1P12271 317 aa22.85■■□□□ 1.25
TRAPPC4-203ENST00000447216 C20orf194Q5TEA3 1177 aa22.85■■□□□ 1.25
TRAPPC4-203ENST00000447216 METTL22Q9BUU2 404 aaPredicted RBP22.85■■□□□ 1.25
TRAPPC4-203ENST00000447216 ATP5J2-PTCD1G3V325 749 aa22.84■■□□□ 1.25
TRAPPC4-203ENST00000447216 GYS1P13807 737 aa22.84■■□□□ 1.25
TRAPPC4-203ENST00000447216 FKBP8Q14318 412 aa22.84■■□□□ 1.25
TRAPPC4-203ENST00000447216 PANK1Q8TE04 598 aa22.84■■□□□ 1.25
TRAPPC4-203ENST00000447216 ABCC4O15439 1325 aa22.83■■□□□ 1.25
TRAPPC4-203ENST00000447216 GPTP24298 496 aa22.83■■□□□ 1.25
TRAPPC4-203ENST00000447216 TCIRG1Q13488 830 aa22.83■■□□□ 1.25
TRAPPC4-203ENST00000447216 DZIP1LQ8IYY4 767 aaKnown RBP22.83■■□□□ 1.25
TRAPPC4-203ENST00000447216 ZNF652Q9Y2D9 606 aa22.83■■□□□ 1.25
TRAPPC4-203ENST00000447216 PXDNLA1KZ92 1463 aa22.82■■□□□ 1.24
TRAPPC4-203ENST00000447216 TBC1D9BQ66K14 1250 aa22.82■■□□□ 1.24
TRAPPC4-203ENST00000447216 MSL1Q68DK7 614 aa22.82■■□□□ 1.24
TRAPPC4-203ENST00000447216 FTSJ3Q8IY81 847 aaKnown RBP22.82■■□□□ 1.24
TRAPPC4-203ENST00000447216 IGKV5-2P06315 115 aa22.81■■□□□ 1.24
TRAPPC4-203ENST00000447216 CWF19L2Q2TBE0 894 aaKnown RBP22.81■■□□□ 1.24
TRAPPC4-203ENST00000447216 BEND3Q5T5X7 828 aa22.81■■□□□ 1.24
TRAPPC4-203ENST00000447216 CLEC4GQ6UXB4 293 aa22.81■■□□□ 1.24
TRAPPC4-203ENST00000447216 BICDL1Q6ZP65 573 aa22.81■■□□□ 1.24
TRAPPC4-203ENST00000447216 TMEM57Q8N5G2 664 aa22.81■■□□□ 1.24
TRAPPC4-203ENST00000447216 NEXNQ0ZGT2 675 aa22.8■■□□□ 1.24
TRAPPC4-203ENST00000447216 HSP90AB3PQ58FF7 597 aa22.8■■□□□ 1.24
TRAPPC4-203ENST00000447216 ISCA1Q9BUE6 129 aa22.8■■□□□ 1.24
TRAPPC4-203ENST00000447216 ATP10DQ9P241 1426 aa22.8■■□□□ 1.24
TRAPPC4-203ENST00000447216 COL24A1Q17RW2 1714 aa22.79■■□□□ 1.24
TRAPPC4-203ENST00000447216 ZNF34Q8IZ26 560 aa22.79■■□□□ 1.24
TRAPPC4-203ENST00000447216 NIP7Q9Y221 180 aaKnown RBP eCLIP22.79■■□□□ 1.24
TRAPPC4-203ENST00000447216 UBN2Q6ZU65 1347 aa22.79■■□□□ 1.24
TRAPPC4-203ENST00000447216 NEURL1BA8MQ27 555 aa22.78■■□□□ 1.24
TRAPPC4-203ENST00000447216 IRX6P78412 446 aaPredicted RBP22.78■■□□□ 1.24
TRAPPC4-203ENST00000447216 LINS1Q8NG48 757 aa22.78■■□□□ 1.24
TRAPPC4-203ENST00000447216 SRCIN1Q9C0H9 1055 aa22.78■■□□□ 1.24
TRAPPC4-203ENST00000447216 FAM177BA6PVY3 158 aa22.77■■□□□ 1.24
TRAPPC4-203ENST00000447216 RGL2O15211 777 aa22.77■■□□□ 1.24
TRAPPC4-203ENST00000447216 MS4A1P11836 297 aa22.77■■□□□ 1.24
TRAPPC4-203ENST00000447216 CCT4P50991 539 aaKnown RBP22.77■■□□□ 1.24
TRAPPC4-203ENST00000447216 PDE3AQ14432 1141 aa22.77■■□□□ 1.24
TRAPPC4-203ENST00000447216 NFIXQ14938 502 aa22.77■■□□□ 1.24
TRAPPC4-203ENST00000447216 INTS3Q68E01 1043 aaKnown RBP22.77■■□□□ 1.24
TRAPPC4-203ENST00000447216 COG6Q9Y2V7 657 aa22.77■■□□□ 1.24
TRAPPC4-203ENST00000447216 ZBTB7AO95365 584 aa22.76■■□□□ 1.23
TRAPPC4-203ENST00000447216 NLRP10Q86W26 655 aa22.76■■□□□ 1.23
TRAPPC4-203ENST00000447216 ITPRIPQ8IWB1 547 aa22.76■■□□□ 1.23
TRAPPC4-203ENST00000447216 ALDH1L1O75891 902 aa22.75■■□□□ 1.23
TRAPPC4-203ENST00000447216 NLGN1Q8N2Q7 840 aa22.75■■□□□ 1.23
TRAPPC4-203ENST00000447216 TM4SF1P30408 202 aa22.74■■□□□ 1.23
TRAPPC4-203ENST00000447216 TRIM28Q13263 835 aaKnown RBP22.74■■□□□ 1.23
TRAPPC4-203ENST00000447216 SUSD4Q5VX71 490 aa22.74■■□□□ 1.23
TRAPPC4-203ENST00000447216 SLC16A10Q8TF71 515 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms