RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 KIF6Q6ZMV9 814 aa28.34■■■□□ 2.13
APOE-204ENST00000446996 TRMT2AQ8IZ69 625 aaKnown RBP28.34■■■□□ 2.13
APOE-204ENST00000446996 PARP3Q9Y6F1 533 aa28.34■■■□□ 2.13
APOE-204ENST00000446996 MAP3K15Q6ZN16 1313 aa28.34■■■□□ 2.13
APOE-204ENST00000446996 VAMP4O75379 141 aa28.33■■■□□ 2.13
APOE-204ENST00000446996 NFIXQ14938 502 aa28.32■■■□□ 2.12
APOE-204ENST00000446996 ANXA1P04083 346 aa28.31■■■□□ 2.12
APOE-204ENST00000446996 HNRNPUQ00839 825 aaKnown RBP eCLIP28.31■■■□□ 2.12
APOE-204ENST00000446996 TTLL7Q6ZT98 887 aa28.31■■■□□ 2.12
APOE-204ENST00000446996 CD2APQ9Y5K6 639 aa28.31■■■□□ 2.12
APOE-204ENST00000446996 NUP98P52948 1817 aa28.31■■■□□ 2.12
APOE-204ENST00000446996 POLRMTO00411 1230 aaKnown RBP28.3■■■□□ 2.12
APOE-204ENST00000446996 COPS6Q7L5N1 327 aa28.3■■■□□ 2.12
APOE-204ENST00000446996 DDR1Q08345 913 aa28.29■■■□□ 2.12
APOE-204ENST00000446996 TBC1D9BQ66K14 1250 aa28.29■■■□□ 2.12
APOE-204ENST00000446996 XAGE3Q8WTP9 111 aa28.29■■■□□ 2.12
APOE-204ENST00000446996 FHDC1Q9C0D6 1143 aaPredicted RBP28.29■■■□□ 2.12
APOE-204ENST00000446996 GIGYF2Q6Y7W6 1299 aaKnown RBP28.28■■■□□ 2.12
APOE-204ENST00000446996 SYT17Q9BSW7 474 aa28.28■■■□□ 2.12
APOE-204ENST00000446996 STK31Q9BXU1 1019 aa28.28■■■□□ 2.12
APOE-204ENST00000446996 NRXN2Q9P2S2 1712 aa28.28■■■□□ 2.12
APOE-204ENST00000446996 HLFQ16534 295 aa28.27■■■□□ 2.12
APOE-204ENST00000446996 CDCA7LQ96GN5 454 aa28.27■■■□□ 2.12
APOE-204ENST00000446996 SETDB2Q96T68 719 aa28.27■■■□□ 2.12
APOE-204ENST00000446996 KIF13BQ9NQT8 1826 aa28.27■■■□□ 2.12
APOE-204ENST00000446996 AFDNP55196 1824 aaKnown RBP28.26■■■□□ 2.11
APOE-204ENST00000446996 CARMIL3Q8ND23 1372 aa28.25■■■□□ 2.11
APOE-204ENST00000446996 SERPINB2P05120 415 aa28.25■■■□□ 2.11
APOE-204ENST00000446996 ZNF428Q96B54 188 aa28.25■■■□□ 2.11
APOE-204ENST00000446996 ATP10DQ9P241 1426 aa28.25■■■□□ 2.11
APOE-204ENST00000446996 ZBED9Q6R2W3 1325 aa28.24■■■□□ 2.11
APOE-204ENST00000446996 AIMP1Q12904 312 aaKnown RBP28.24■■■□□ 2.11
APOE-204ENST00000446996 HSP90AB3PQ58FF7 597 aa28.24■■■□□ 2.11
APOE-204ENST00000446996 ANKRD13DQ6ZTN6 518 aa28.24■■■□□ 2.11
APOE-204ENST00000446996 PLBD2Q8NHP8 589 aa28.24■■■□□ 2.11
APOE-204ENST00000446996 ZBTB3Q9H5J0 574 aa28.24■■■□□ 2.11
APOE-204ENST00000446996 CT47B1P0C2W7 299 aaPredicted RBP28.23■■■□□ 2.11
APOE-204ENST00000446996 BICDL1Q6ZP65 573 aa28.22■■■□□ 2.11
APOE-204ENST00000446996 C10orf71Q711Q0 1435 aa28.22■■■□□ 2.11
APOE-204ENST00000446996 NIP7Q9Y221 180 aaKnown RBP eCLIP28.22■■■□□ 2.111e-12■□□□□ 8.6
APOE-204ENST00000446996 ZNF34Q8IZ26 560 aa28.21■■■□□ 2.11
APOE-204ENST00000446996 PHAXQ9H814 394 aaKnown RBP28.21■■■□□ 2.11
APOE-204ENST00000446996 DDX58O95786 925 aaKnown RBP28.2■■■□□ 2.1
APOE-204ENST00000446996 SLC4A2P04920 1241 aa28.2■■■□□ 2.1
APOE-204ENST00000446996 TGFB2P61812 414 aa28.2■■■□□ 2.1
APOE-204ENST00000446996 ANKRD36CQ5JPF3 1778 aa28.19■■■□□ 2.1
APOE-204ENST00000446996 TCIRG1Q13488 830 aa28.18■■■□□ 2.1
APOE-204ENST00000446996 PARP10Q53GL7 1025 aa28.18■■■□□ 2.1
APOE-204ENST00000446996 KLHL34Q8N239 644 aa28.18■■■□□ 2.1
APOE-204ENST00000446996 IBTKQ9P2D0 1353 aaPredicted RBP28.17■■■□□ 2.1
APOE-204ENST00000446996 TPTE2Q6XPS3 522 aa28.17■■■□□ 2.1
APOE-204ENST00000446996 NYXQ9GZU5 481 aa28.16■■■□□ 2.1
APOE-204ENST00000446996 PRR5LQ6MZQ0 368 aa28.15■■■□□ 2.1
APOE-204ENST00000446996 RIC3Q7Z5B4 369 aa28.15■■■□□ 2.1
APOE-204ENST00000446996 NBPF5PQ86XG9 351 aaPredicted RBP28.15■■■□□ 2.1
APOE-204ENST00000446996 PDZRN3Q9UPQ7 1066 aa28.15■■■□□ 2.1
APOE-204ENST00000446996 ARFGEF2Q9Y6D5 1785 aa28.14■■■□□ 2.1
APOE-204ENST00000446996 TCERG1O14776 1098 aaKnown RBP28.14■■■□□ 2.1
APOE-204ENST00000446996 TRIM28Q13263 835 aaKnown RBP28.14■■■□□ 2.1
APOE-204ENST00000446996 KSR2Q6VAB6 950 aa28.14■■■□□ 2.1
APOE-204ENST00000446996 CNBD1Q8NA66 436 aa28.14■■■□□ 2.1
APOE-204ENST00000446996 FLIIQ13045 1269 aa28.13■■■□□ 2.09
APOE-204ENST00000446996 ALDH1L2Q3SY69 923 aa28.13■■■□□ 2.09
APOE-204ENST00000446996 PPP1R42Q7Z4L9 355 aa28.13■■■□□ 2.09
APOE-204ENST00000446996 BRIP1Q9BX63 1249 aa28.13■■■□□ 2.09
APOE-204ENST00000446996 ST5P78524 1137 aa28.12■■■□□ 2.09
APOE-204ENST00000446996 G2E3Q7L622 706 aa28.12■■■□□ 2.09
APOE-204ENST00000446996 NLGN2Q8NFZ4 835 aa28.12■■■□□ 2.09
APOE-204ENST00000446996 ISCA1Q9BUE6 129 aa28.12■■■□□ 2.09
APOE-204ENST00000446996 RNF123Q5XPI4 1314 aa28.12■■■□□ 2.09
APOE-204ENST00000446996 UBN2Q6ZU65 1347 aa28.12■■■□□ 2.09
APOE-204ENST00000446996 KIAA1551Q9HCM1 1747 aa28.12■■■□□ 2.09
APOE-204ENST00000446996 GPTP24298 496 aa28.11■■■□□ 2.09
APOE-204ENST00000446996 METTL22Q9BUU2 404 aaPredicted RBP28.1■■■□□ 2.09
APOE-204ENST00000446996 UTRNP46939 3433 aa28.1■■■□□ 2.09
APOE-204ENST00000446996 NPHP1O15259 732 aa28.09■■■□□ 2.09
APOE-204ENST00000446996 PDE6BP35913 854 aa28.09■■■□□ 2.09
APOE-204ENST00000446996 SUSD4Q5VX71 490 aa28.09■■■□□ 2.09
APOE-204ENST00000446996 NLRP10Q86W26 655 aa28.09■■■□□ 2.09
APOE-204ENST00000446996 PXDNLA1KZ92 1463 aa28.08■■■□□ 2.09
APOE-204ENST00000446996 ANKRD31Q8N7Z5 1873 aa28.08■■■□□ 2.09
APOE-204ENST00000446996 PI4KAP2A4QPH2 592 aa28.08■■■□□ 2.09
APOE-204ENST00000446996 PI4KAP1Q8N8J0 262 aa28.08■■■□□ 2.09
APOE-204ENST00000446996 NTSR2O95665 410 aa28.07■■■□□ 2.08
APOE-204ENST00000446996 GTF2E1P29083 439 aaPredicted RBP28.07■■■□□ 2.08
APOE-204ENST00000446996 MRPL50Q8N5N7 158 aaKnown RBP28.07■■■□□ 2.08
APOE-204ENST00000446996 UTP14AQ9BVJ6 771 aaKnown RBP28.07■■■□□ 2.08
APOE-204ENST00000446996 MAP3K2Q9Y2U5 619 aa28.07■■■□□ 2.08
APOE-204ENST00000446996 ADCY9O60503 1353 aa28.07■■■□□ 2.08
APOE-204ENST00000446996 RIC1Q4ADV7 1423 aa28.07■■■□□ 2.08
APOE-204ENST00000446996 N4BP2Q86UW6 1770 aaPredicted RBP28.06■■■□□ 2.08
APOE-204ENST00000446996 DCAF8L1A6NGE4 600 aa28.06■■■□□ 2.08
APOE-204ENST00000446996 BRPF1P55201 1214 aaPredicted RBP28.06■■■□□ 2.08
APOE-204ENST00000446996 FKBP5Q13451 457 aaPredicted RBP28.06■■■□□ 2.08
APOE-204ENST00000446996 SSH1Q8WYL5 1049 aa28.06■■■□□ 2.08
APOE-204ENST00000446996 KLRG2A4D1S0 409 aaPredicted RBP28.05■■■□□ 2.08
APOE-204ENST00000446996 DPEP1P16444 411 aa28.05■■■□□ 2.08
APOE-204ENST00000446996 FAM177BA6PVY3 158 aa28.04■■■□□ 2.08
APOE-204ENST00000446996 NEXNQ0ZGT2 675 aa28.04■■■□□ 2.08
APOE-204ENST00000446996 SLC10A5Q5PT55 438 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms