RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 OGFOD1Q8N543 542 aa8.47□□□□□ -1.05
LINC00440-201ENST00000446579 ZBTB7BO15156 539 aaPredicted RBP8.46□□□□□ -1.06
LINC00440-201ENST00000446579 CLDN10P78369 228 aa8.46□□□□□ -1.06
LINC00440-201ENST00000446579 MTFR1Q15390 333 aa8.46□□□□□ -1.06
LINC00440-201ENST00000446579 CCDC102BQ68D86 513 aa8.46□□□□□ -1.06
LINC00440-201ENST00000446579 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.46□□□□□ -1.06
LINC00440-201ENST00000446579 ZIC5Q96T25 663 aa8.46□□□□□ -1.06
LINC00440-201ENST00000446579 ZNF358Q9NW07 568 aa8.46□□□□□ -1.06
LINC00440-201ENST00000446579 ZDHHC3Q9NYG2 299 aa8.46□□□□□ -1.06
LINC00440-201ENST00000446579 NOP53Q9NZM5 478 aaKnown RBP8.46□□□□□ -1.06
LINC00440-201ENST00000446579 FURINP09958 794 aa8.45□□□□□ -1.06
LINC00440-201ENST00000446579 HOXB4P17483 251 aaPredicted RBP8.45□□□□□ -1.06
LINC00440-201ENST00000446579 PCBP4P57723 403 aaKnown RBP8.45□□□□□ -1.06
LINC00440-201ENST00000446579 CHSY3Q70JA7 882 aa8.45□□□□□ -1.06
LINC00440-201ENST00000446579 TPCN2Q8NHX9 752 aa8.45□□□□□ -1.06
LINC00440-201ENST00000446579 IQSEC3Q9UPP2 1182 aaPredicted RBP8.45□□□□□ -1.06
LINC00440-201ENST00000446579 RBM19Q9Y4C8 960 aaKnown RBP8.45□□□□□ -1.06
LINC00440-201ENST00000446579 RASA1P20936 1047 aa8.44□□□□□ -1.06
LINC00440-201ENST00000446579 LMOD1P29536 600 aaPredicted RBP8.44□□□□□ -1.06
LINC00440-201ENST00000446579 DGKGP49619 791 aa8.44□□□□□ -1.06
LINC00440-201ENST00000446579 LARP1Q6PKG0 1096 aaKnown RBP8.44□□□□□ -1.06
LINC00440-201ENST00000446579 SIX5Q8N196 739 aa8.44□□□□□ -1.06
LINC00440-201ENST00000446579 KIAA1024Q9UPX6 916 aa8.44□□□□□ -1.06
LINC00440-201ENST00000446579 CCDC9Q9Y3X0 531 aaKnown RBP8.44□□□□□ -1.06
LINC00440-201ENST00000446579 C1QTNF9BB2RNN3 333 aa8.43□□□□□ -1.06
LINC00440-201ENST00000446579 M0R2N6 131 aa8.43□□□□□ -1.06
LINC00440-201ENST00000446579 FAM182BQ5T319 152 aa8.43□□□□□ -1.06
LINC00440-201ENST00000446579 KANK4Q5T7N3 995 aaPredicted RBP8.43□□□□□ -1.06
LINC00440-201ENST00000446579 FCHSD1Q86WN1 690 aa8.43□□□□□ -1.06
LINC00440-201ENST00000446579 VRTNQ9H8Y1 702 aa8.43□□□□□ -1.06
LINC00440-201ENST00000446579 NEUROD4Q9HD90 331 aa8.43□□□□□ -1.06
LINC00440-201ENST00000446579 MARK1Q9P0L2 795 aa8.43□□□□□ -1.06
LINC00440-201ENST00000446579 KLF15Q9UIH9 416 aa8.43□□□□□ -1.06
LINC00440-201ENST00000446579 HCN2Q9UL51 889 aa8.43□□□□□ -1.06
LINC00440-201ENST00000446579 FAM157BP0CG42 384 aa8.42□□□□□ -1.06
LINC00440-201ENST00000446579 TXLNAP40222 546 aa8.42□□□□□ -1.06
LINC00440-201ENST00000446579 PDE4CQ08493 712 aa8.42□□□□□ -1.06
LINC00440-201ENST00000446579 ZNF295-AS1Q8N0V1 137 aa8.42□□□□□ -1.06
LINC00440-201ENST00000446579 PBXIP1Q96AQ6 731 aa8.42□□□□□ -1.06
LINC00440-201ENST00000446579 SCHIP1Q9P0W5 487 aaPredicted RBP8.42□□□□□ -1.06
LINC00440-201ENST00000446579 ZNF232Q9UNY5 417 aa8.42□□□□□ -1.06
LINC00440-201ENST00000446579 SRPK2P78362 688 aaKnown RBP8.41□□□□□ -1.06
LINC00440-201ENST00000446579 CFAP70Q5T0N1 1121 aa8.41□□□□□ -1.06
LINC00440-201ENST00000446579 L3MBTL2Q969R5 705 aa8.41□□□□□ -1.06
LINC00440-201ENST00000446579 ZNF594Q96JF6 807 aaPredicted RBP8.41□□□□□ -1.06
LINC00440-201ENST00000446579 AVENQ9NQS1 362 aaPredicted RBP8.41□□□□□ -1.06
LINC00440-201ENST00000446579 EPHA4P54764 986 aa8.4□□□□□ -1.06
LINC00440-201ENST00000446579 TBCELQ5QJ74 424 aa8.4□□□□□ -1.06
LINC00440-201ENST00000446579 ZNF468Q5VIY5 522 aaPredicted RBP8.4□□□□□ -1.06
LINC00440-201ENST00000446579 LRRC69Q6ZNQ3 347 aa8.4□□□□□ -1.06
LINC00440-201ENST00000446579 CD163Q86VB7 1156 aa8.4□□□□□ -1.06
LINC00440-201ENST00000446579 STRN4Q9NRL3 753 aa8.4□□□□□ -1.06
LINC00440-201ENST00000446579 ACIN1Q9UKV3 1341 aaKnown RBP8.39□□□□□ -1.07
LINC00440-201ENST00000446579 FAM196BA6NMK8 535 aa8.39□□□□□ -1.07
LINC00440-201ENST00000446579 DKK1O94907 266 aa8.39□□□□□ -1.07
LINC00440-201ENST00000446579 NOS2P35228 1153 aa8.39□□□□□ -1.07
LINC00440-201ENST00000446579 CHRNA4P43681 627 aa8.39□□□□□ -1.07
LINC00440-201ENST00000446579 SEC13P55735 322 aa8.39□□□□□ -1.07
LINC00440-201ENST00000446579 PTK7Q13308 1070 aa8.39□□□□□ -1.07
LINC00440-201ENST00000446579 XP32Q5T750 250 aa8.39□□□□□ -1.07
LINC00440-201ENST00000446579 TNS4Q8IZW8 715 aa8.39□□□□□ -1.07
LINC00440-201ENST00000446579 ZDHHC1Q8WTX9 485 aa8.39□□□□□ -1.07
LINC00440-201ENST00000446579 ALAS2P22557 587 aa8.38□□□□□ -1.07
LINC00440-201ENST00000446579 RANGAP1P46060 587 aaPredicted RBP8.38□□□□□ -1.07
LINC00440-201ENST00000446579 TEAD4Q15561 434 aa8.38□□□□□ -1.07
LINC00440-201ENST00000446579 SAMD5Q5TGI4 173 aa8.38□□□□□ -1.07
LINC00440-201ENST00000446579 SLC9A9Q8IVB4 645 aa8.38□□□□□ -1.07
LINC00440-201ENST00000446579 PLVAPQ9BX97 442 aa8.38□□□□□ -1.07
LINC00440-201ENST00000446579 SFI1A8K8P3 1242 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 USP17L15C9J2P7 530 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 USP17L10C9JJH3 530 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 USP17L13C9JLJ4 530 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 USP17L12C9JPN9 530 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 USP17L11C9JVI0 530 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 USP17L21D6R901 530 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 USP17L18D6R9N7 530 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 USP17L22D6RA61 530 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 USP17L17D6RBQ6 530 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 USP17L19D6RCP7 530 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 USP17L20D6RJB6 530 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 USP17L24Q0WX57 530 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 LAMC2Q13753 1193 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 CRTC2Q53ET0 693 aaPredicted RBP8.37□□□□□ -1.07
LINC00440-201ENST00000446579 NPM2Q86SE8 214 aaKnown RBP8.37□□□□□ -1.07
LINC00440-201ENST00000446579 SYT9Q86SS6 491 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 USTQ9Y2C2 406 aa8.37□□□□□ -1.07
LINC00440-201ENST00000446579 ELOA3CA0A087WX78 387 aaPredicted RBP8.36□□□□□ -1.07
LINC00440-201ENST00000446579 SERTM1A2A2V5 107 aa8.36□□□□□ -1.07
LINC00440-201ENST00000446579 ELOA3DA6NLF2 546 aaPredicted RBP8.36□□□□□ -1.07
LINC00440-201ENST00000446579 EFSO43281 561 aa8.36□□□□□ -1.07
LINC00440-201ENST00000446579 RFX1P22670 979 aa8.36□□□□□ -1.07
LINC00440-201ENST00000446579 ELOA3BQ3SY89 546 aa8.36□□□□□ -1.07
LINC00440-201ENST00000446579 ANKMY2Q8IV38 441 aa8.36□□□□□ -1.07
LINC00440-201ENST00000446579 ELOA3Q8NG57 546 aa8.36□□□□□ -1.07
LINC00440-201ENST00000446579 CHMP3Q9Y3E7 222 aa8.36□□□□□ -1.07
LINC00440-201ENST00000446579 DPYDQ12882 1025 aa8.35□□□□□ -1.07
LINC00440-201ENST00000446579 DOC2BQ14184 412 aa8.35□□□□□ -1.07
LINC00440-201ENST00000446579 AEBP1Q8IUX7 1158 aa8.35□□□□□ -1.07
LINC00440-201ENST00000446579 TSEN2Q8NCE0 465 aaKnown RBP8.35□□□□□ -1.07
LINC00440-201ENST00000446579 RHPN1Q8TCX5 695 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms