RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 ANKRD13DQ6ZTN6 518 aa20.52■□□□□ 0.88
LAPTM4B-201ENST00000445593 AACSQ86V21 672 aa20.52■□□□□ 0.88
LAPTM4B-201ENST00000445593 CHMP3Q9Y3E7 222 aa20.52■□□□□ 0.88
LAPTM4B-201ENST00000445593 UBE3BQ7Z3V4 1068 aa20.52■□□□□ 0.88
LAPTM4B-201ENST00000445593 RAB11FIP3O75154 756 aa20.52■□□□□ 0.87
LAPTM4B-201ENST00000445593 ALDH1L1O75891 902 aa20.52■□□□□ 0.87
LAPTM4B-201ENST00000445593 SSFA2P28290 1259 aa20.52■□□□□ 0.87
LAPTM4B-201ENST00000445593 CLASRPQ8N2M8 674 aaKnown RBP20.52■□□□□ 0.87
LAPTM4B-201ENST00000445593 IFIT2P09913 472 aaKnown RBP20.51■□□□□ 0.87
LAPTM4B-201ENST00000445593 ZGPATQ8N5A5 531 aaKnown RBP20.51■□□□□ 0.87
LAPTM4B-201ENST00000445593 A1BGP04217 495 aa20.5■□□□□ 0.87
LAPTM4B-201ENST00000445593 PI4K2BQ8TCG2 481 aa20.5■□□□□ 0.87
LAPTM4B-201ENST00000445593 WDR17Q8IZU2 1322 aa20.5■□□□□ 0.87
LAPTM4B-201ENST00000445593 NEURL1BA8MQ27 555 aa20.5■□□□□ 0.87
LAPTM4B-201ENST00000445593 LARP6Q9BRS8 491 aaKnown RBP20.5■□□□□ 0.87
LAPTM4B-201ENST00000445593 DTNBO60941 627 aa20.49■□□□□ 0.87
LAPTM4B-201ENST00000445593 PKP1Q13835 747 aa20.49■□□□□ 0.87
LAPTM4B-201ENST00000445593 ZBTB3Q9H5J0 574 aa20.49■□□□□ 0.87
LAPTM4B-201ENST00000445593 TLR7Q9NYK1 1049 aaKnown RBP20.49■□□□□ 0.87
LAPTM4B-201ENST00000445593 STAP2Q9UGK3 403 aa20.49■□□□□ 0.87
LAPTM4B-201ENST00000445593 G3BP1Q13283 466 aaKnown RBP eCLIP20.49■□□□□ 0.87
LAPTM4B-201ENST00000445593 ST18O60284 1047 aa20.48■□□□□ 0.87
LAPTM4B-201ENST00000445593 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.48■□□□□ 0.87
LAPTM4B-201ENST00000445593 GCKRQ14397 625 aa20.48■□□□□ 0.87
LAPTM4B-201ENST00000445593 CAMTA1Q9Y6Y1 1673 aa20.48■□□□□ 0.87
LAPTM4B-201ENST00000445593 LMTK3Q96Q04 1460 aa20.48■□□□□ 0.87
LAPTM4B-201ENST00000445593 TTLL7Q6ZT98 887 aa20.48■□□□□ 0.87
LAPTM4B-201ENST00000445593 IL2RBP14784 551 aa20.47■□□□□ 0.87
LAPTM4B-201ENST00000445593 CHAMP1Q96JM3 812 aa20.47■□□□□ 0.87
LAPTM4B-201ENST00000445593 NDUFB9Q9Y6M9 179 aa20.47■□□□□ 0.87
LAPTM4B-201ENST00000445593 AK9Q5TCS8 1911 aa20.46■□□□□ 0.87
LAPTM4B-201ENST00000445593 A0A087WZG4 1122 aa20.46■□□□□ 0.87
LAPTM4B-201ENST00000445593 HSP90AB4PQ58FF6 505 aa20.46■□□□□ 0.87
LAPTM4B-201ENST00000445593 METTL22Q9BUU2 404 aaPredicted RBP20.46■□□□□ 0.87
LAPTM4B-201ENST00000445593 BTG4Q9NY30 223 aa20.46■□□□□ 0.87
LAPTM4B-201ENST00000445593 SOS2Q07890 1332 aaPredicted RBP20.46■□□□□ 0.87
LAPTM4B-201ENST00000445593 TRAK2O60296 914 aa20.46■□□□□ 0.87
LAPTM4B-201ENST00000445593 SASH1O94885 1247 aa20.46■□□□□ 0.87
LAPTM4B-201ENST00000445593 SYTL4Q96C24 671 aaPredicted RBP20.46■□□□□ 0.87
LAPTM4B-201ENST00000445593 OVOS2A0A0G2JMS6 1433 aa20.46■□□□□ 0.87
LAPTM4B-201ENST00000445593 CNTROBQ8N137 903 aa20.45■□□□□ 0.86
LAPTM4B-201ENST00000445593 EAF2Q96CJ1 260 aaPredicted RBP20.45■□□□□ 0.86
LAPTM4B-201ENST00000445593 BOLA2Q9H3K6 86 aa20.45■□□□□ 0.86
LAPTM4B-201ENST00000445593 PCDH11XQ9BZA7 1347 aa20.45■□□□□ 0.86
LAPTM4B-201ENST00000445593 PCDH11YQ9BZA8 1340 aa20.45■□□□□ 0.86
LAPTM4B-201ENST00000445593 COL18A1P39060 1754 aa20.45■□□□□ 0.86
LAPTM4B-201ENST00000445593 NBPF26B4DH59 902 aa20.45■□□□□ 0.86
LAPTM4B-201ENST00000445593 NBPF14Q5TI25 921 aa20.45■□□□□ 0.86
LAPTM4B-201ENST00000445593 NBPF10Q6P3W6 841 aaKnown RBP20.45■□□□□ 0.86
LAPTM4B-201ENST00000445593 NBPF15Q8N660 670 aa20.45■□□□□ 0.86
LAPTM4B-201ENST00000445593 MCCP23508 829 aa20.44■□□□□ 0.86
LAPTM4B-201ENST00000445593 DDIT3P35638 169 aa20.44■□□□□ 0.86
LAPTM4B-201ENST00000445593 CCDC85AQ96PX6 553 aaPredicted RBP20.44■□□□□ 0.86
LAPTM4B-201ENST00000445593 FOXD4L6Q3SYB3 417 aaPredicted RBP20.44■□□□□ 0.86
LAPTM4B-201ENST00000445593 FOXD4L3Q6VB84 417 aaPredicted RBP20.44■□□□□ 0.86
LAPTM4B-201ENST00000445593 CPDO75976 1380 aa20.44■□□□□ 0.86
LAPTM4B-201ENST00000445593 NCOA3Q9Y6Q9 1424 aa20.44■□□□□ 0.86
LAPTM4B-201ENST00000445593 EDC3Q96F86 508 aaKnown RBP20.44■□□□□ 0.86
LAPTM4B-201ENST00000445593 DIAPH3Q9NSV4 1193 aa20.44■□□□□ 0.86
LAPTM4B-201ENST00000445593 C5P01031 1676 aa20.43■□□□□ 0.86
LAPTM4B-201ENST00000445593 XIRP1Q702N8 1843 aaKnown RBP20.42■□□□□ 0.86
LAPTM4B-201ENST00000445593 CPA1P15085 419 aa20.42■□□□□ 0.86
LAPTM4B-201ENST00000445593 ECHDC1Q9NTX5 307 aa20.42■□□□□ 0.86
LAPTM4B-201ENST00000445593 MTX1Q13505 466 aa20.42■□□□□ 0.86
LAPTM4B-201ENST00000445593 RAB3GAP1Q15042 981 aa20.42■□□□□ 0.86
LAPTM4B-201ENST00000445593 LRP10Q7Z4F1 713 aa20.42■□□□□ 0.86
LAPTM4B-201ENST00000445593 GLRX3O76003 335 aaKnown RBP20.41■□□□□ 0.86
LAPTM4B-201ENST00000445593 KIAA1211Q6ZU35 1233 aa20.4■□□□□ 0.86
LAPTM4B-201ENST00000445593 COL5A2P05997 1499 aaPredicted RBP20.4■□□□□ 0.86
LAPTM4B-201ENST00000445593 SCN11AQ9UI33 1791 aa20.4■□□□□ 0.86
LAPTM4B-201ENST00000445593 TPRNQ4KMQ1 711 aa20.4■□□□□ 0.86
LAPTM4B-201ENST00000445593 GPATCH3Q96I76 525 aa20.4■□□□□ 0.86
LAPTM4B-201ENST00000445593 ASAP1Q9ULH1 1129 aa20.4■□□□□ 0.86
LAPTM4B-201ENST00000445593 LMBR1LQ6UX01 489 aa20.39■□□□□ 0.85
LAPTM4B-201ENST00000445593 TMX3Q96JJ7 454 aa20.39■□□□□ 0.85
LAPTM4B-201ENST00000445593 GBP4Q96PP9 640 aa20.39■□□□□ 0.85
LAPTM4B-201ENST00000445593 SIPA1L3O60292 1781 aaPredicted RBP20.39■□□□□ 0.85
LAPTM4B-201ENST00000445593 STRCQ7RTU9 1775 aa20.39■□□□□ 0.85
LAPTM4B-201ENST00000445593 CARD10Q9BWT7 1032 aa20.39■□□□□ 0.85
LAPTM4B-201ENST00000445593 ADAMTS2O95450 1211 aa20.38■□□□□ 0.85
LAPTM4B-201ENST00000445593 ERC1Q8IUD2 1116 aa20.38■□□□□ 0.85
LAPTM4B-201ENST00000445593 FAM227BQ96M60 508 aa20.38■□□□□ 0.85
LAPTM4B-201ENST00000445593 TMOD3Q9NYL9 352 aa20.38■□□□□ 0.85
LAPTM4B-201ENST00000445593 HDAC5Q9UQL6 1122 aa20.38■□□□□ 0.85
LAPTM4B-201ENST00000445593 SGSM2O43147 1006 aa20.38■□□□□ 0.85
LAPTM4B-201ENST00000445593 CHGBP05060 677 aa20.38■□□□□ 0.85
LAPTM4B-201ENST00000445593 TFCP2Q12800 502 aa20.38■□□□□ 0.85
LAPTM4B-201ENST00000445593 GLIPR1L2Q4G1C9 344 aa20.37■□□□□ 0.85
LAPTM4B-201ENST00000445593 MCTP1Q6DN14 999 aa20.37■□□□□ 0.85
LAPTM4B-201ENST00000445593 RASEFQ8IZ41 740 aa20.37■□□□□ 0.85
LAPTM4B-201ENST00000445593 CIZ1Q9ULV3 898 aaPredicted RBP20.37■□□□□ 0.85
LAPTM4B-201ENST00000445593 NCLP19338 710 aaKnown RBP20.37■□□□□ 0.85
LAPTM4B-201ENST00000445593 AOX1Q06278 1338 aa20.36■□□□□ 0.85
LAPTM4B-201ENST00000445593 DDX11L8A8MPP1 907 aa20.36■□□□□ 0.85
LAPTM4B-201ENST00000445593 KCNJ4P48050 445 aa20.36■□□□□ 0.85
LAPTM4B-201ENST00000445593 PTH1RQ03431 593 aa20.36■□□□□ 0.85
LAPTM4B-201ENST00000445593 FSD1Q9BTV5 496 aa20.36■□□□□ 0.85
LAPTM4B-201ENST00000445593 DNAJC2Q99543 621 aaKnown RBP20.36■□□□□ 0.85
LAPTM4B-201ENST00000445593 PLBD2Q8NHP8 589 aa20.36■□□□□ 0.85
LAPTM4B-201ENST00000445593 ZNF594Q96JF6 807 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms