RNA–Protein interactions for RNA: ENST00000445268.5

RPE-213, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5 BASIC

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-213ENST00000445268 OLFM4Q6UX06 510 aa12.78□□□□□ -0.36
RPE-213ENST00000445268 NFATC2IPQ8NCF5 419 aa12.78□□□□□ -0.36
RPE-213ENST00000445268 CYP19A1P11511 503 aaPredicted RBP12.77□□□□□ -0.37
RPE-213ENST00000445268 PDE6BP35913 854 aa12.77□□□□□ -0.37
RPE-213ENST00000445268 MAP2K2P36507 400 aa12.77□□□□□ -0.37
RPE-213ENST00000445268 EIF4A2Q14240 407 aaKnown RBP12.77□□□□□ -0.37
RPE-213ENST00000445268 CIAPIN1Q6FI81 312 aa12.77□□□□□ -0.37
RPE-213ENST00000445268 BRIP1Q9BX63 1249 aa12.77□□□□□ -0.37
RPE-213ENST00000445268 BRPF1P55201 1214 aaPredicted RBP12.76□□□□□ -0.37
RPE-213ENST00000445268 CNKSR1Q969H4 720 aa12.76□□□□□ -0.37
RPE-213ENST00000445268 ZIC5Q96T25 663 aa12.76□□□□□ -0.37
RPE-213ENST00000445268 UBR2Q8IWV8 1755 aa12.76□□□□□ -0.37
RPE-213ENST00000445268 ST20-MTHFSA0A0A6YYL1 179 aa12.75□□□□□ -0.37
RPE-213ENST00000445268 MTHFSP49914 203 aa12.75□□□□□ -0.37
RPE-213ENST00000445268 CCDC93Q567U6 631 aa12.75□□□□□ -0.37
RPE-213ENST00000445268 SOGA3Q5TF21 947 aa12.75□□□□□ -0.37
RPE-213ENST00000445268 SRGNP10124 158 aa12.74□□□□□ -0.37
RPE-213ENST00000445268 CANXP27824 592 aaKnown RBP12.74□□□□□ -0.37
RPE-213ENST00000445268 FKBP4Q02790 459 aaKnown RBP eCLIP12.74□□□□□ -0.37
RPE-213ENST00000445268 PLEKHO1Q53GL0 409 aaPredicted RBP12.74□□□□□ -0.37
RPE-213ENST00000445268 STYK1Q6J9G0 422 aa12.74□□□□□ -0.37
RPE-213ENST00000445268 C7orf43Q8WVR3 580 aa12.74□□□□□ -0.37
RPE-213ENST00000445268 PDZRN3Q9UPQ7 1066 aa12.74□□□□□ -0.37
RPE-213ENST00000445268 AKAP11Q9UKA4 1901 aa12.74□□□□□ -0.37
RPE-213ENST00000445268 MRC1P22897 1456 aa12.73□□□□□ -0.37
RPE-213ENST00000445268 FZD9O00144 591 aa12.73□□□□□ -0.37
RPE-213ENST00000445268 SLC39A6Q13433 755 aa12.73□□□□□ -0.37
RPE-213ENST00000445268 HABP4Q5JVS0 413 aaKnown RBP12.73□□□□□ -0.37
RPE-213ENST00000445268 SAPCD2Q86UD0 394 aa12.73□□□□□ -0.37
RPE-213ENST00000445268 GJA3Q9Y6H8 435 aa12.73□□□□□ -0.37
RPE-213ENST00000445268 IARSP41252 1262 aaKnown RBP12.72□□□□□ -0.37
RPE-213ENST00000445268 EPS15P42566 896 aa12.72□□□□□ -0.37
RPE-213ENST00000445268 SCNN1DP51172 638 aa12.72□□□□□ -0.37
RPE-213ENST00000445268 C1orf141Q5JVX7 400 aa12.72□□□□□ -0.37
RPE-213ENST00000445268 AEBP1Q8IUX7 1158 aa12.72□□□□□ -0.37
RPE-213ENST00000445268 GPC2Q8N158 579 aa12.72□□□□□ -0.37
RPE-213ENST00000445268 CNBD1Q8NA66 436 aa12.72□□□□□ -0.37
RPE-213ENST00000445268 MASTLQ96GX5 879 aa12.72□□□□□ -0.37
RPE-213ENST00000445268 POLKQ9UBT6 870 aa12.72□□□□□ -0.37
RPE-213ENST00000445268 CELF2O95319 508 aaKnown RBP12.71□□□□□ -0.37
RPE-213ENST00000445268 CARD14Q9BXL6 1004 aa12.71□□□□□ -0.37
RPE-213ENST00000445268 NPHP1O15259 732 aa12.7□□□□□ -0.38
RPE-213ENST00000445268 LMOD1P29536 600 aaPredicted RBP12.7□□□□□ -0.38
RPE-213ENST00000445268 GCC1Q96CN9 775 aa12.7□□□□□ -0.38
RPE-213ENST00000445268 ZNF408Q9H9D4 720 aa12.7□□□□□ -0.38
RPE-213ENST00000445268 ZNF330Q9Y3S2 320 aaPredicted RBP12.7□□□□□ -0.38
RPE-213ENST00000445268 SNED1Q8TER0 1413 aa12.7□□□□□ -0.38
RPE-213ENST00000445268 MKI67P46013 3256 aaKnown RBP12.7□□□□□ -0.38
RPE-213ENST00000445268 ST5P78524 1137 aa12.69□□□□□ -0.38
RPE-213ENST00000445268 GLIS2Q9BZE0 524 aaPredicted RBP12.69□□□□□ -0.38
RPE-213ENST00000445268 TBC1D2BQ9UPU7 963 aa12.69□□□□□ -0.38
RPE-213ENST00000445268 TNNT2P45379 298 aaPredicted RBP12.68□□□□□ -0.38
RPE-213ENST00000445268 EIF5P55010 431 aaKnown RBP12.68□□□□□ -0.38
RPE-213ENST00000445268 AMOTQ4VCS5 1084 aa12.68□□□□□ -0.38
RPE-213ENST00000445268 SYNE4Q8N205 404 aa12.68□□□□□ -0.38
RPE-213ENST00000445268 NBPF15Q8N660 670 aa12.68□□□□□ -0.38
RPE-213ENST00000445268 SLC52A2Q9HAB3 445 aa12.68□□□□□ -0.38
RPE-213ENST00000445268 HPS5Q9UPZ3 1129 aa12.67□□□□□ -0.38
RPE-213ENST00000445268 FXR1P51114 621 aaKnown RBP eCLIP12.66□□□□□ -0.38
RPE-213ENST00000445268 EIF6P56537 245 aaKnown RBP12.66□□□□□ -0.38
RPE-213ENST00000445268 NOGQ13253 232 aa12.66□□□□□ -0.38
RPE-213ENST00000445268 USP50Q70EL3 339 aaPredicted RBP12.66□□□□□ -0.38
RPE-213ENST00000445268 SLC51AQ86UW1 340 aa12.66□□□□□ -0.38
RPE-213ENST00000445268 HHIPL1Q96JK4 782 aa12.66□□□□□ -0.38
RPE-213ENST00000445268 CTU1Q7Z7A3 348 aaKnown RBP12.65□□□□□ -0.38
RPE-213ENST00000445268 JDP2Q8WYK2 163 aa12.65□□□□□ -0.38
RPE-213ENST00000445268 SETDB2Q96T68 719 aa12.65□□□□□ -0.38
RPE-213ENST00000445268 LGR6Q9HBX8 967 aa12.65□□□□□ -0.38
RPE-213ENST00000445268 A0A087WZG4 1122 aa12.64□□□□□ -0.39
RPE-213ENST00000445268 CAMTA2O94983 1202 aa12.64□□□□□ -0.39
RPE-213ENST00000445268 NPR1P16066 1061 aa12.64□□□□□ -0.39
RPE-213ENST00000445268 RTKN2Q8IZC4 609 aa12.64□□□□□ -0.39
RPE-213ENST00000445268 TRPA1O75762 1119 aa12.63□□□□□ -0.39
RPE-213ENST00000445268 DLK2Q6UY11 383 aa12.63□□□□□ -0.39
RPE-213ENST00000445268 SAGE1Q9NXZ1 904 aa12.63□□□□□ -0.39
RPE-213ENST00000445268 POLR2AP24928 1970 aaKnown RBP12.63□□□□□ -0.39
RPE-213ENST00000445268 TRIOBPQ9H2D6 2365 aa12.62□□□□□ -0.39
RPE-213ENST00000445268 FAM155AB1AL88 458 aaPredicted RBP12.62□□□□□ -0.39
RPE-213ENST00000445268 HUNKP57058 714 aa12.62□□□□□ -0.39
RPE-213ENST00000445268 RNF186Q9NXI6 227 aa12.62□□□□□ -0.39
RPE-213ENST00000445268 SZT2Q5T011 3432 aa12.61□□□□□ -0.39
RPE-213ENST00000445268 RNMTO43148 476 aaKnown RBP12.61□□□□□ -0.39
RPE-213ENST00000445268 NBPF5PQ86XG9 351 aaPredicted RBP12.61□□□□□ -0.39
RPE-213ENST00000445268 VSIG10Q8N0Z9 540 aa12.61□□□□□ -0.39
RPE-213ENST00000445268 PSMD1Q99460 953 aa12.61□□□□□ -0.39
RPE-213ENST00000445268 ADARB2Q9NS39 739 aaKnown RBP12.61□□□□□ -0.39
RPE-213ENST00000445268 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
RPE-213ENST00000445268 STARD3NLO95772 234 aa12.6□□□□□ -0.39
RPE-213ENST00000445268 KIF23Q02241 960 aaPredicted RBP12.6□□□□□ -0.39
RPE-213ENST00000445268 AKAP4Q5JQC9 854 aa12.6□□□□□ -0.39
RPE-213ENST00000445268 SULT6B1Q6IMI4 303 aa12.6□□□□□ -0.39
RPE-213ENST00000445268 LARGE2Q8N3Y3 721 aa12.6□□□□□ -0.39
RPE-213ENST00000445268 GPRC5DQ9NZD1 345 aa12.6□□□□□ -0.39
RPE-213ENST00000445268 PAPPA2Q9BXP8 1791 aa12.59□□□□□ -0.39
RPE-213ENST00000445268 FAM177BA6PVY3 158 aa12.59□□□□□ -0.39
RPE-213ENST00000445268 DLL1O00548 723 aa12.59□□□□□ -0.39
RPE-213ENST00000445268 TRPM4Q8TD43 1214 aa12.59□□□□□ -0.39
RPE-213ENST00000445268 CUL9Q8IWT3 2517 aa12.59□□□□□ -0.39
RPE-213ENST00000445268 KLRG2A4D1S0 409 aaPredicted RBP12.58□□□□□ -0.4
RPE-213ENST00000445268 A1BGP04217 495 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms