RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 LRRC4BQ9NT99 713 aa11.2□□□□□ -0.62
FXR1-203ENST00000445140 ADCY9O60503 1353 aa11.2□□□□□ -0.62
FXR1-203ENST00000445140 RRP1P56182 461 aaKnown RBP11.2□□□□□ -0.62
FXR1-203ENST00000445140 TRIM28Q13263 835 aaKnown RBP11.2□□□□□ -0.62
FXR1-203ENST00000445140 SF3B2Q13435 895 aaKnown RBP11.2□□□□□ -0.62
FXR1-203ENST00000445140 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
FXR1-203ENST00000445140 SMC4Q9NTJ3 1288 aa11.2□□□□□ -0.62
FXR1-203ENST00000445140 RNF216Q9NWF9 866 aaPredicted RBP11.2□□□□□ -0.62
FXR1-203ENST00000445140 CHPF2Q9P2E5 772 aa11.2□□□□□ -0.62
FXR1-203ENST00000445140 PTCD1O75127 700 aaKnown RBP11.19□□□□□ -0.62
FXR1-203ENST00000445140 DDX58O95786 925 aaKnown RBP11.19□□□□□ -0.62
FXR1-203ENST00000445140 FLIIQ13045 1269 aa11.19□□□□□ -0.62
FXR1-203ENST00000445140 ERICH6BQ5W0A0 696 aa11.19□□□□□ -0.62
FXR1-203ENST00000445140 ZKSCAN2Q63HK3 967 aa11.19□□□□□ -0.62
FXR1-203ENST00000445140 CLEC4GQ6UXB4 293 aa11.19□□□□□ -0.62
FXR1-203ENST00000445140 PLBD2Q8NHP8 589 aa11.19□□□□□ -0.62
FXR1-203ENST00000445140 PRAMEF22A3QJZ6 481 aa11.19□□□□□ -0.62
FXR1-203ENST00000445140 INTS3Q68E01 1043 aaKnown RBP11.19□□□□□ -0.62
FXR1-203ENST00000445140 ATF7IPQ6VMQ6 1270 aa11.19□□□□□ -0.62
FXR1-203ENST00000445140 KSR2Q6VAB6 950 aa11.18□□□□□ -0.62
FXR1-203ENST00000445140 MAP3K15Q6ZN16 1313 aa11.18□□□□□ -0.62
FXR1-203ENST00000445140 MYH3P11055 1940 aa11.18□□□□□ -0.62
FXR1-203ENST00000445140 HSP90AB3PQ58FF7 597 aa11.18□□□□□ -0.62
FXR1-203ENST00000445140 ZBTB1Q9Y2K1 713 aa11.18□□□□□ -0.62
FXR1-203ENST00000445140 UTYO14607 1347 aa11.17□□□□□ -0.62
FXR1-203ENST00000445140 DDX60Q8IY21 1712 aaKnown RBP11.17□□□□□ -0.62
FXR1-203ENST00000445140 ALDH1L1O75891 902 aa11.17□□□□□ -0.62
FXR1-203ENST00000445140 CHMP4BQ9H444 224 aaKnown RBP11.17□□□□□ -0.62
FXR1-203ENST00000445140 NARFQ9UHQ1 456 aa11.17□□□□□ -0.62
FXR1-203ENST00000445140 CCT4P50991 539 aaKnown RBP11.16□□□□□ -0.62
FXR1-203ENST00000445140 ATF5Q9Y2D1 282 aaPredicted RBP11.16□□□□□ -0.62
FXR1-203ENST00000445140 DLEC1Q9Y238 1755 aa11.16□□□□□ -0.62
FXR1-203ENST00000445140 PROSER3Q2NL68 480 aa11.16□□□□□ -0.62
FXR1-203ENST00000445140 USP42Q9H9J4 1324 aaKnown RBP11.15□□□□□ -0.62
FXR1-203ENST00000445140 SENP3-EIF4A1A0A087X0R7 540 aa11.15□□□□□ -0.62
FXR1-203ENST00000445140 CAMTA2O94983 1202 aa11.15□□□□□ -0.62
FXR1-203ENST00000445140 A1BGP04217 495 aa11.15□□□□□ -0.62
FXR1-203ENST00000445140 METTL22Q9BUU2 404 aaPredicted RBP11.15□□□□□ -0.62
FXR1-203ENST00000445140 RTCBQ9Y3I0 505 aaKnown RBP11.15□□□□□ -0.62
FXR1-203ENST00000445140 BCAR3O75815 825 aa11.15□□□□□ -0.62
FXR1-203ENST00000445140 TRIM27P14373 513 aa11.15□□□□□ -0.62
FXR1-203ENST00000445140 GIGYF2Q6Y7W6 1299 aaKnown RBP11.15□□□□□ -0.62
FXR1-203ENST00000445140 AK7Q96M32 723 aa11.15□□□□□ -0.62
FXR1-203ENST00000445140 ISCA1Q9BUE6 129 aa11.15□□□□□ -0.62
FXR1-203ENST00000445140 NOB1Q9ULX3 412 aaKnown RBP11.15□□□□□ -0.62
FXR1-203ENST00000445140 EIF2S2P20042 333 aaKnown RBP11.14□□□□□ -0.63
FXR1-203ENST00000445140 KIF6Q6ZMV9 814 aa11.14□□□□□ -0.63
FXR1-203ENST00000445140 SLC16A10Q8TF71 515 aa11.14□□□□□ -0.63
FXR1-203ENST00000445140 XAGE3Q8WTP9 111 aa11.14□□□□□ -0.63
FXR1-203ENST00000445140 DNAAF4Q8WXU2 420 aa11.14□□□□□ -0.63
FXR1-203ENST00000445140 MAPK8IP2Q13387 824 aaPredicted RBP11.14□□□□□ -0.63
FXR1-203ENST00000445140 G2E3Q7L622 706 aa11.14□□□□□ -0.63
FXR1-203ENST00000445140 LINS1Q8NG48 757 aa11.14□□□□□ -0.63
FXR1-203ENST00000445140 ZNF652Q9Y2D9 606 aa11.14□□□□□ -0.63
FXR1-203ENST00000445140 LRP5O75197 1615 aa11.14□□□□□ -0.63
FXR1-203ENST00000445140 ELL2O00472 640 aaPredicted RBP11.13□□□□□ -0.63
FXR1-203ENST00000445140 EZH2Q15910 746 aaKnown RBP11.13□□□□□ -0.63
FXR1-203ENST00000445140 SLC15A2Q16348 729 aa11.13□□□□□ -0.63
FXR1-203ENST00000445140 ANKRD13DQ6ZTN6 518 aa11.13□□□□□ -0.63
FXR1-203ENST00000445140 DZIP1LQ8IYY4 767 aaKnown RBP11.13□□□□□ -0.63
FXR1-203ENST00000445140 PARP10Q53GL7 1025 aa11.13□□□□□ -0.63
FXR1-203ENST00000445140 BEND3Q5T5X7 828 aa11.13□□□□□ -0.63
FXR1-203ENST00000445140 COPS6Q7L5N1 327 aa11.13□□□□□ -0.63
FXR1-203ENST00000445140 ZNF34Q8IZ26 560 aa11.13□□□□□ -0.63
FXR1-203ENST00000445140 PHAXQ9H814 394 aaKnown RBP11.13□□□□□ -0.63
FXR1-203ENST00000445140 STK32BQ9NY57 414 aa11.13□□□□□ -0.63
FXR1-203ENST00000445140 PNPLA7Q6ZV29 1317 aa11.13□□□□□ -0.63
FXR1-203ENST00000445140 CDHR2Q9BYE9 1310 aa11.13□□□□□ -0.63
FXR1-203ENST00000445140 ZNF827Q17R98 1081 aa11.12□□□□□ -0.63
FXR1-203ENST00000445140 HDAC5Q9UQL6 1122 aa11.12□□□□□ -0.63
FXR1-203ENST00000445140 EN1Q05925 392 aaPredicted RBP11.12□□□□□ -0.63
FXR1-203ENST00000445140 TCIRG1Q13488 830 aa11.12□□□□□ -0.63
FXR1-203ENST00000445140 NPM2Q86SE8 214 aaKnown RBP11.12□□□□□ -0.63
FXR1-203ENST00000445140 DZIP3Q86Y13 1208 aaKnown RBP11.12□□□□□ -0.63
FXR1-203ENST00000445140 CCDC191Q8NCU4 936 aa11.12□□□□□ -0.63
FXR1-203ENST00000445140 GNPATO15228 680 aa11.12□□□□□ -0.63
FXR1-203ENST00000445140 MVPQ14764 893 aaKnown RBP11.12□□□□□ -0.63
FXR1-203ENST00000445140 TRAPPC3LQ5T215 181 aa11.12□□□□□ -0.63
FXR1-203ENST00000445140 PLA2G12BQ9BX93 195 aa11.12□□□□□ -0.63
FXR1-203ENST00000445140 KIAA1551Q9HCM1 1747 aa11.11□□□□□ -0.63
FXR1-203ENST00000445140 FKBP5Q13451 457 aaPredicted RBP11.11□□□□□ -0.63
FXR1-203ENST00000445140 DDX19BQ9UMR2 479 aa11.11□□□□□ -0.63
FXR1-203ENST00000445140 ANKRD31Q8N7Z5 1873 aa11.11□□□□□ -0.63
FXR1-203ENST00000445140 RTL9Q8NET4 1388 aa11.11□□□□□ -0.63
FXR1-203ENST00000445140 ILDR2Q71H61 639 aa11.11□□□□□ -0.63
FXR1-203ENST00000445140 BCL2L12Q9HB09 334 aa11.11□□□□□ -0.63
FXR1-203ENST00000445140 LRRC37AA6NMS7 1700 aa11.1□□□□□ -0.63
FXR1-203ENST00000445140 PI4KAP2A4QPH2 592 aa11.1□□□□□ -0.63
FXR1-203ENST00000445140 TTLL7Q6ZT98 887 aa11.1□□□□□ -0.63
FXR1-203ENST00000445140 PI4KAP1Q8N8J0 262 aa11.1□□□□□ -0.63
FXR1-203ENST00000445140 ARHGEF1Q92888 912 aaKnown RBP11.1□□□□□ -0.63
FXR1-203ENST00000445140 CARMIL3Q8ND23 1372 aa11.1□□□□□ -0.63
FXR1-203ENST00000445140 NEURL1BA8MQ27 555 aa11.1□□□□□ -0.63
FXR1-203ENST00000445140 CANXP27824 592 aaKnown RBP11.1□□□□□ -0.63
FXR1-203ENST00000445140 NEXNQ0ZGT2 675 aa11.1□□□□□ -0.63
FXR1-203ENST00000445140 ANO8Q9HCE9 1232 aaPredicted RBP11.1□□□□□ -0.63
FXR1-203ENST00000445140 MAP3K2Q9Y2U5 619 aa11.1□□□□□ -0.63
FXR1-203ENST00000445140 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.09□□□□□ -0.63
FXR1-203ENST00000445140 HSP90B1P14625 803 aaKnown RBP11.09□□□□□ -0.63
FXR1-203ENST00000445140 MYL6BP14649 208 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms