RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 C4AP0C0L4 1744 aa19.22■□□□□ 0.67
CCNE1-203ENST00000444983 TUBGCP6Q96RT7 1819 aa19.22■□□□□ 0.67
CCNE1-203ENST00000444983 ADRA2BP18089 450 aa19.22■□□□□ 0.67
CCNE1-203ENST00000444983 SMIM5Q71RC9 77 aa19.22■□□□□ 0.67
CCNE1-203ENST00000444983 CLUAP1Q96AJ1 413 aa19.22■□□□□ 0.67
CCNE1-203ENST00000444983 PXDNLA1KZ92 1463 aa19.22■□□□□ 0.67
CCNE1-203ENST00000444983 BCORQ6W2J9 1755 aa19.21■□□□□ 0.67
CCNE1-203ENST00000444983 MAP3K15Q6ZN16 1313 aa19.21■□□□□ 0.67
CCNE1-203ENST00000444983 ERVV-1B6SEH8 477 aa19.21■□□□□ 0.67
CCNE1-203ENST00000444983 MS4A1P11836 297 aa19.21■□□□□ 0.67
CCNE1-203ENST00000444983 DZIP3Q86Y13 1208 aaKnown RBP19.21■□□□□ 0.67
CCNE1-203ENST00000444983 PANK1Q8TE04 598 aa19.21■□□□□ 0.67
CCNE1-203ENST00000444983 DNAAF4Q8WXU2 420 aa19.21■□□□□ 0.67
CCNE1-203ENST00000444983 MAP3K2Q9Y2U5 619 aa19.21■□□□□ 0.67
CCNE1-203ENST00000444983 ZNF330Q9Y3S2 320 aaPredicted RBP19.21■□□□□ 0.67
CCNE1-203ENST00000444983 QSER1Q2KHR3 1735 aa19.21■□□□□ 0.67
CCNE1-203ENST00000444983 ATP10DQ9P241 1426 aa19.21■□□□□ 0.67
CCNE1-203ENST00000444983 A0A087WZG4 1122 aa19.2■□□□□ 0.66
CCNE1-203ENST00000444983 SSFA2P28290 1259 aa19.2■□□□□ 0.66
CCNE1-203ENST00000444983 INTS3Q68E01 1043 aaKnown RBP19.2■□□□□ 0.66
CCNE1-203ENST00000444983 ARHGEF1Q92888 912 aaKnown RBP19.2■□□□□ 0.66
CCNE1-203ENST00000444983 ANO8Q9HCE9 1232 aaPredicted RBP19.2■□□□□ 0.66
CCNE1-203ENST00000444983 TBC1D2BQ9UPU7 963 aa19.2■□□□□ 0.66
CCNE1-203ENST00000444983 NUP98P52948 1817 aa19.2■□□□□ 0.66
CCNE1-203ENST00000444983 RGL2O15211 777 aa19.2■□□□□ 0.66
CCNE1-203ENST00000444983 CAMTA2O94983 1202 aa19.2■□□□□ 0.66
CCNE1-203ENST00000444983 TRAPPC3LQ5T215 181 aa19.2■□□□□ 0.66
CCNE1-203ENST00000444983 RIC3Q7Z5B4 369 aa19.2■□□□□ 0.66
CCNE1-203ENST00000444983 SCN7AQ01118 1682 aa19.19■□□□□ 0.66
CCNE1-203ENST00000444983 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.19■□□□□ 0.66
CCNE1-203ENST00000444983 SLC15A2Q16348 729 aa19.19■□□□□ 0.66
CCNE1-203ENST00000444983 BEND3Q5T5X7 828 aa19.19■□□□□ 0.66
CCNE1-203ENST00000444983 KIF6Q6ZMV9 814 aa19.19■□□□□ 0.66
CCNE1-203ENST00000444983 TMEM57Q8N5G2 664 aa19.19■□□□□ 0.66
CCNE1-203ENST00000444983 METTL22Q9BUU2 404 aaPredicted RBP19.19■□□□□ 0.66
CCNE1-203ENST00000444983 ZBTB3Q9H5J0 574 aa19.19■□□□□ 0.66
CCNE1-203ENST00000444983 NARFQ9UHQ1 456 aa19.19■□□□□ 0.66
CCNE1-203ENST00000444983 HLFQ16534 295 aa19.18■□□□□ 0.66
CCNE1-203ENST00000444983 GIGYF2Q6Y7W6 1299 aaKnown RBP19.18■□□□□ 0.66
CCNE1-203ENST00000444983 NPM2Q86SE8 214 aaKnown RBP19.18■□□□□ 0.66
CCNE1-203ENST00000444983 FTSJ3Q8IY81 847 aaKnown RBP19.18■□□□□ 0.66
CCNE1-203ENST00000444983 IBTKQ9P2D0 1353 aaPredicted RBP19.18■□□□□ 0.66
CCNE1-203ENST00000444983 BCL2L12Q9HB09 334 aa19.17■□□□□ 0.66
CCNE1-203ENST00000444983 TFCP2L1Q9NZI6 479 aa19.17■□□□□ 0.66
CCNE1-203ENST00000444983 ANKRD36CQ5JPF3 1778 aa19.16■□□□□ 0.66
CCNE1-203ENST00000444983 USP42Q9H9J4 1324 aaKnown RBP19.16■□□□□ 0.66
CCNE1-203ENST00000444983 IGKV5-2P06315 115 aa19.16■□□□□ 0.66
CCNE1-203ENST00000444983 CCT4P50991 539 aaKnown RBP19.16■□□□□ 0.66
CCNE1-203ENST00000444983 MVPQ14764 893 aaKnown RBP19.16■□□□□ 0.66
CCNE1-203ENST00000444983 SLC4A10Q6U841 1118 aa19.16■□□□□ 0.66
CCNE1-203ENST00000444983 CLEC4GQ6UXB4 293 aa19.16■□□□□ 0.66
CCNE1-203ENST00000444983 LINS1Q8NG48 757 aa19.16■□□□□ 0.66
CCNE1-203ENST00000444983 PNPLA7Q6ZV29 1317 aa19.15■□□□□ 0.66
CCNE1-203ENST00000444983 PHF14O94880 888 aa19.15■□□□□ 0.66
CCNE1-203ENST00000444983 TCIRG1Q13488 830 aa19.15■□□□□ 0.66
CCNE1-203ENST00000444983 COG6Q9Y2V7 657 aa19.15■□□□□ 0.66
CCNE1-203ENST00000444983 TRIM28Q13263 835 aaKnown RBP19.14■□□□□ 0.66
CCNE1-203ENST00000444983 COL23A1Q86Y22 540 aaPredicted RBP19.14■□□□□ 0.66
CCNE1-203ENST00000444983 FLAD1Q8NFF5 587 aa19.14■□□□□ 0.66
CCNE1-203ENST00000444983 ARXQ96QS3 562 aa19.14■□□□□ 0.66
CCNE1-203ENST00000444983 ISCA1Q9BUE6 129 aa19.14■□□□□ 0.66
CCNE1-203ENST00000444983 STK32BQ9NY57 414 aa19.14■□□□□ 0.66
CCNE1-203ENST00000444983 ALDH1L1O75891 902 aa19.14■□□□□ 0.65
CCNE1-203ENST00000444983 RFC4P35249 363 aa19.14■□□□□ 0.65
CCNE1-203ENST00000444983 IRX6P78412 446 aaPredicted RBP19.14■□□□□ 0.65
CCNE1-203ENST00000444983 USPL1Q5W0Q7 1092 aa19.14■□□□□ 0.65
CCNE1-203ENST00000444983 ZNF34Q8IZ26 560 aa19.14■□□□□ 0.65
CCNE1-203ENST00000444983 MYD88Q99836 296 aa19.14■□□□□ 0.65
CCNE1-203ENST00000444983 SRCIN1Q9C0H9 1055 aa19.14■□□□□ 0.65
CCNE1-203ENST00000444983 SRP68Q9UHB9 627 aaKnown RBP19.14■□□□□ 0.65
CCNE1-203ENST00000444983 ZBTB7BO15156 539 aaPredicted RBP19.13■□□□□ 0.65
CCNE1-203ENST00000444983 NEXNQ0ZGT2 675 aa19.13■□□□□ 0.65
CCNE1-203ENST00000444983 CWF19L2Q2TBE0 894 aaKnown RBP19.13■□□□□ 0.65
CCNE1-203ENST00000444983 CRBNQ96SW2 442 aa19.13■□□□□ 0.65
CCNE1-203ENST00000444983 AFDNP55196 1824 aaKnown RBP19.12■□□□□ 0.65
CCNE1-203ENST00000444983 NEURL1BA8MQ27 555 aa19.12■□□□□ 0.65
CCNE1-203ENST00000444983 ZPR1O75312 459 aa19.12■□□□□ 0.65
CCNE1-203ENST00000444983 HSP90AB3PQ58FF7 597 aa19.12■□□□□ 0.65
CCNE1-203ENST00000444983 ITPRIPQ8IWB1 547 aa19.11■□□□□ 0.65
CCNE1-203ENST00000444983 DDX19BQ9UMR2 479 aa19.11■□□□□ 0.65
CCNE1-203ENST00000444983 ATP5J2-PTCD1G3V325 749 aa19.11■□□□□ 0.65
CCNE1-203ENST00000444983 GYS1P13807 737 aa19.11■□□□□ 0.65
CCNE1-203ENST00000444983 CCDC191Q8NCU4 936 aa19.11■□□□□ 0.65
CCNE1-203ENST00000444983 USP44Q9H0E7 712 aa19.11■□□□□ 0.65
CCNE1-203ENST00000444983 ZNF652Q9Y2D9 606 aa19.11■□□□□ 0.65
CCNE1-203ENST00000444983 GCKRQ14397 625 aa19.1■□□□□ 0.65
CCNE1-203ENST00000444983 EXOC6Q8TAG9 804 aa19.1■□□□□ 0.65
CCNE1-203ENST00000444983 UTYO14607 1347 aa19.1■□□□□ 0.65
CCNE1-203ENST00000444983 UBN2Q6ZU65 1347 aa19.1■□□□□ 0.65
CCNE1-203ENST00000444983 FKBP8Q14318 412 aa19.08■□□□□ 0.65
CCNE1-203ENST00000444983 NLRP10Q86W26 655 aa19.08■□□□□ 0.65
CCNE1-203ENST00000444983 ZBTB40Q9NUA8 1239 aa19.08■□□□□ 0.65
CCNE1-203ENST00000444983 COL24A1Q17RW2 1714 aa19.08■□□□□ 0.64
CCNE1-203ENST00000444983 TBC1D9BQ66K14 1250 aa19.08■□□□□ 0.64
CCNE1-203ENST00000444983 NEFLP07196 543 aa19.07■□□□□ 0.64
CCNE1-203ENST00000444983 MEIS3Q99687 375 aa19.07■□□□□ 0.64
CCNE1-203ENST00000444983 CWC25Q9NXE8 425 aaPredicted RBP19.07■□□□□ 0.64
CCNE1-203ENST00000444983 NBPF7P0C2Y1 421 aaPredicted RBP19.06■□□□□ 0.64
CCNE1-203ENST00000444983 GPTP24298 496 aa19.06■□□□□ 0.64
CCNE1-203ENST00000444983 CASP7P55210 303 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms