RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 EPS15P42566 896 aa26.29■■□□□ 1.8
CTDSPL-206ENST00000443503 GCP02774 474 aa26.28■■□□□ 1.8
CTDSPL-206ENST00000443503 PLEKHM2Q8IWE5 1019 aa26.28■■□□□ 1.8
CTDSPL-206ENST00000443503 KAT6BQ8WYB5 2073 aa26.28■■□□□ 1.8
CTDSPL-206ENST00000443503 WASF1Q92558 559 aa26.28■■□□□ 1.8
CTDSPL-206ENST00000443503 TBX22Q9Y458 520 aa26.28■■□□□ 1.8
CTDSPL-206ENST00000443503 HAND2P61296 217 aa26.28■■□□□ 1.8
CTDSPL-206ENST00000443503 G2E3Q7L622 706 aa26.28■■□□□ 1.8
CTDSPL-206ENST00000443503 CKAP2LQ8IYA6 745 aa26.27■■□□□ 1.8
CTDSPL-206ENST00000443503 AEBP2Q6ZN18 517 aaPredicted RBP26.27■■□□□ 1.8
CTDSPL-206ENST00000443503 LINS1Q8NG48 757 aa26.27■■□□□ 1.8
CTDSPL-206ENST00000443503 MAGEC2Q9UBF1 373 aaPredicted RBP26.27■■□□□ 1.8
CTDSPL-206ENST00000443503 CAVIN4Q5BKX8 364 aa26.27■■□□□ 1.8
CTDSPL-206ENST00000443503 SOGA3Q5TF21 947 aa26.27■■□□□ 1.8
CTDSPL-206ENST00000443503 TARBP1Q13395 1621 aaKnown RBP26.27■■□□□ 1.8
CTDSPL-206ENST00000443503 KLHL40Q2TBA0 621 aa26.26■■□□□ 1.79
CTDSPL-206ENST00000443503 LMBR1LQ6UX01 489 aa26.26■■□□□ 1.79
CTDSPL-206ENST00000443503 HOXC9P31274 260 aa26.26■■□□□ 1.79
CTDSPL-206ENST00000443503 CWF19L2Q2TBE0 894 aaKnown RBP26.26■■□□□ 1.79
CTDSPL-206ENST00000443503 SMARCE1Q969G3 411 aa26.26■■□□□ 1.79
CTDSPL-206ENST00000443503 RBM27Q9P2N5 1060 aaKnown RBP26.26■■□□□ 1.79
CTDSPL-206ENST00000443503 GCC2Q8IWJ2 1684 aa26.26■■□□□ 1.79
CTDSPL-206ENST00000443503 NEK1Q96PY6 1258 aa26.26■■□□□ 1.79
CTDSPL-206ENST00000443503 TEX13AQ9BXU3 409 aaPredicted RBP26.26■■□□□ 1.79
CTDSPL-206ENST00000443503 PHAXQ9H814 394 aaKnown RBP26.26■■□□□ 1.79
CTDSPL-206ENST00000443503 DACH1Q9UI36 760 aa26.26■■□□□ 1.79
CTDSPL-206ENST00000443503 NPHP3Q7Z494 1330 aa26.26■■□□□ 1.79
CTDSPL-206ENST00000443503 ZMYM4Q5VZL5 1548 aa26.26■■□□□ 1.79
CTDSPL-206ENST00000443503 GOLGA8BA8MQT2 603 aa26.26■■□□□ 1.79
CTDSPL-206ENST00000443503 NFATC2IPQ8NCF5 419 aa26.26■■□□□ 1.79
CTDSPL-206ENST00000443503 MAP7D2Q96T17 732 aa26.25■■□□□ 1.79
CTDSPL-206ENST00000443503 SLC5A1P13866 664 aa26.25■■□□□ 1.79
CTDSPL-206ENST00000443503 NECAB1Q8N987 351 aa26.25■■□□□ 1.79
CTDSPL-206ENST00000443503 ZCRB1Q8TBF4 217 aaKnown RBP26.25■■□□□ 1.79
CTDSPL-206ENST00000443503 USP25Q9UHP3 1055 aa26.25■■□□□ 1.79
CTDSPL-206ENST00000443503 SNX21Q969T3 373 aa26.24■■□□□ 1.79
CTDSPL-206ENST00000443503 MTERF4Q7Z6M4 381 aaKnown RBP26.24■■□□□ 1.79
CTDSPL-206ENST00000443503 KDM6BO15054 1643 aa26.24■■□□□ 1.79
CTDSPL-206ENST00000443503 MAP3K5Q99683 1374 aa26.24■■□□□ 1.79
CTDSPL-206ENST00000443503 KRT18P05783 430 aaKnown RBP26.23■■□□□ 1.79
CTDSPL-206ENST00000443503 PPFIBP1Q86W92 1011 aa26.23■■□□□ 1.79
CTDSPL-206ENST00000443503 CCAR1Q8IX12 1150 aaKnown RBP26.23■■□□□ 1.79
CTDSPL-206ENST00000443503 KDM2BQ8NHM5 1336 aa26.23■■□□□ 1.79
CTDSPL-206ENST00000443503 CCDC112Q8NEF3 446 aa26.23■■□□□ 1.79
CTDSPL-206ENST00000443503 FAM177A1Q8N128 213 aaPredicted RBP26.23■■□□□ 1.79
CTDSPL-206ENST00000443503 CCP110O43303 1012 aa26.22■■□□□ 1.79
CTDSPL-206ENST00000443503 ZPR1O75312 459 aa26.22■■□□□ 1.79
CTDSPL-206ENST00000443503 TEX35Q5T0J7 233 aa26.22■■□□□ 1.79
CTDSPL-206ENST00000443503 RBM8AQ9Y5S9 174 aaKnown RBP26.22■■□□□ 1.79
CTDSPL-206ENST00000443503 ANAPC15P60006 121 aa26.22■■□□□ 1.79
CTDSPL-206ENST00000443503 BRF1Q92994 677 aa26.22■■□□□ 1.79
CTDSPL-206ENST00000443503 BLMP54132 1417 aaPredicted RBP26.21■■□□□ 1.79
CTDSPL-206ENST00000443503 IFIT3O14879 490 aaKnown RBP26.21■■□□□ 1.79
CTDSPL-206ENST00000443503 HMG20BQ9P0W2 317 aa26.21■■□□□ 1.79
CTDSPL-206ENST00000443503 EDC4Q6P2E9 1401 aaKnown RBP26.21■■□□□ 1.79
CTDSPL-206ENST00000443503 RANBP6O60518 1105 aaKnown RBP26.2■■□□□ 1.79
CTDSPL-206ENST00000443503 STIM1Q13586 685 aa26.2■■□□□ 1.79
CTDSPL-206ENST00000443503 RAB11FIP4Q86YS3 637 aa26.2■■□□□ 1.79
CTDSPL-206ENST00000443503 RBM5P52756 815 aaKnown RBP eCLIP26.2■■□□□ 1.78
CTDSPL-206ENST00000443503 USP16Q9Y5T5 823 aa26.2■■□□□ 1.78
CTDSPL-206ENST00000443503 CCDC196A0A1B0GTZ2 297 aa26.2■■□□□ 1.78
CTDSPL-206ENST00000443503 IP6K1Q92551 441 aa26.2■■□□□ 1.78
CTDSPL-206ENST00000443503 OTUD7AQ8TE49 926 aaPredicted RBP26.19■■□□□ 1.78
CTDSPL-206ENST00000443503 LRRC2Q9BYS8 371 aa26.19■■□□□ 1.78
CTDSPL-206ENST00000443503 SLC12A7Q9Y666 1083 aa26.19■■□□□ 1.78
CTDSPL-206ENST00000443503 CHL1O00533 1208 aa26.19■■□□□ 1.78
CTDSPL-206ENST00000443503 CFAP100Q494V2 611 aa26.19■■□□□ 1.78
CTDSPL-206ENST00000443503 CAGE1Q8TC20 777 aa26.19■■□□□ 1.78
CTDSPL-206ENST00000443503 ZSCAN29Q8IWY8 852 aaPredicted RBP26.19■■□□□ 1.78
CTDSPL-206ENST00000443503 ZHX3Q9H4I2 956 aa26.19■■□□□ 1.78
CTDSPL-206ENST00000443503 C19orf44Q9H6X5 657 aa26.19■■□□□ 1.78
CTDSPL-206ENST00000443503 CBFA2T2O43439 604 aa26.18■■□□□ 1.78
CTDSPL-206ENST00000443503 SOS1Q07889 1333 aaPredicted RBP26.18■■□□□ 1.78
CTDSPL-206ENST00000443503 MSH6P52701 1360 aa26.18■■□□□ 1.78
CTDSPL-206ENST00000443503 HSP90B2PQ58FF3 399 aa26.18■■□□□ 1.78
CTDSPL-206ENST00000443503 ANO10Q9NW15 660 aa26.18■■□□□ 1.78
CTDSPL-206ENST00000443503 TRPM2O94759 1503 aa26.18■■□□□ 1.78
CTDSPL-206ENST00000443503 SMTNL1A8MU46 457 aa26.18■■□□□ 1.78
CTDSPL-206ENST00000443503 DHX8Q14562 1220 aaKnown RBP26.18■■□□□ 1.78
CTDSPL-206ENST00000443503 UQCRHLA0A096LP55 91 aa26.17■■□□□ 1.78
CTDSPL-206ENST00000443503 UQCRHP07919 91 aa26.17■■□□□ 1.78
CTDSPL-206ENST00000443503 USP5P45974 858 aa26.17■■□□□ 1.78
CTDSPL-206ENST00000443503 ORC3Q9UBD5 711 aaPredicted RBP26.17■■□□□ 1.78
CTDSPL-206ENST00000443503 GOLGA8AA7E2F4 631 aa26.17■■□□□ 1.78
CTDSPL-206ENST00000443503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.17■■□□□ 1.78
CTDSPL-206ENST00000443503 IQCA1Q86XH1 822 aa26.16■■□□□ 1.78
CTDSPL-206ENST00000443503 FSIP1Q8NA03 581 aa26.16■■□□□ 1.78
CTDSPL-206ENST00000443503 INSRP06213 1382 aa26.16■■□□□ 1.78
CTDSPL-206ENST00000443503 SSBP05455 408 aaKnown RBP eCLIP26.16■■□□□ 1.78
CTDSPL-206ENST00000443503 MICU3Q86XE3 530 aa26.16■■□□□ 1.78
CTDSPL-206ENST00000443503 NGLY1Q96IV0 654 aa26.16■■□□□ 1.78
CTDSPL-206ENST00000443503 MKNK2Q9HBH9 465 aa26.16■■□□□ 1.78
CTDSPL-206ENST00000443503 ZNHIT6Q9NWK9 470 aaKnown RBP26.16■■□□□ 1.78
CTDSPL-206ENST00000443503 DDX19AQ9NUU7 478 aaKnown RBP26.16■■□□□ 1.78
CTDSPL-206ENST00000443503 ZSCAN22P10073 491 aaPredicted RBP26.16■■□□□ 1.78
CTDSPL-206ENST00000443503 DZIP1Q86YF9 867 aaKnown RBP26.15■■□□□ 1.78
CTDSPL-206ENST00000443503 CTCFLQ8NI51 663 aaPredicted RBP26.15■■□□□ 1.78
CTDSPL-206ENST00000443503 ANKIB1Q9P2G1 1089 aa26.15■■□□□ 1.78
CTDSPL-206ENST00000443503 UBE2HP62256 183 aa26.15■■□□□ 1.78
CTDSPL-206ENST00000443503 ARHGEF5Q12774 1597 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms