RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 COL3A1P02461 1466 aaPredicted RBP27.99■■■□□ 2.07
POLR2J3-202ENST00000443430 ARFGEF2Q9Y6D5 1785 aa27.97■■■□□ 2.07
POLR2J3-202ENST00000443430 U2SURPO15042 1029 aaKnown RBP27.97■■■□□ 2.07
POLR2J3-202ENST00000443430 MASTLQ96GX5 879 aa27.97■■■□□ 2.07
POLR2J3-202ENST00000443430 NPHP1O15259 732 aa27.96■■■□□ 2.07
POLR2J3-202ENST00000443430 KCNQ3O43525 872 aa27.96■■■□□ 2.07
POLR2J3-202ENST00000443430 ST5P78524 1137 aa27.96■■■□□ 2.07
POLR2J3-202ENST00000443430 NPM2Q86SE8 214 aaKnown RBP27.96■■■□□ 2.07
POLR2J3-202ENST00000443430 BCORQ6W2J9 1755 aa27.96■■■□□ 2.07
POLR2J3-202ENST00000443430 SOGA3Q5TF21 947 aa27.95■■■□□ 2.06
POLR2J3-202ENST00000443430 CEMIPQ8WUJ3 1361 aa27.95■■■□□ 2.06
POLR2J3-202ENST00000443430 DZIP3Q86Y13 1208 aaKnown RBP27.94■■■□□ 2.06
POLR2J3-202ENST00000443430 C7orf43Q8WVR3 580 aa27.93■■■□□ 2.06
POLR2J3-202ENST00000443430 USP16Q9Y5T5 823 aa27.92■■■□□ 2.06
POLR2J3-202ENST00000443430 SCN4AP35499 1836 aa27.92■■■□□ 2.06
POLR2J3-202ENST00000443430 PASKQ96RG2 1323 aa27.92■■■□□ 2.06
POLR2J3-202ENST00000443430 IQCA1LA6NCM1 817 aa27.91■■■□□ 2.06
POLR2J3-202ENST00000443430 BTBD11A6QL63 1104 aa27.91■■■□□ 2.06
POLR2J3-202ENST00000443430 L3MBTL3Q96JM7 780 aaPredicted RBP27.91■■■□□ 2.06
POLR2J3-202ENST00000443430 CNTNAP1P78357 1384 aa27.9■■■□□ 2.06
POLR2J3-202ENST00000443430 PIP4K2AP48426 406 aaPredicted RBP27.9■■■□□ 2.06
POLR2J3-202ENST00000443430 LDHDQ86WU2 507 aa27.9■■■□□ 2.06
POLR2J3-202ENST00000443430 TAF1DQ9H5J8 278 aaPredicted RBP27.9■■■□□ 2.06
POLR2J3-202ENST00000443430 CLEC4GQ6UXB4 293 aa27.89■■■□□ 2.06
POLR2J3-202ENST00000443430 NBPF5PQ86XG9 351 aaPredicted RBP27.89■■■□□ 2.06
POLR2J3-202ENST00000443430 PHACTR3Q96KR7 559 aa27.89■■■□□ 2.06
POLR2J3-202ENST00000443430 FOXN1O15353 648 aa27.88■■■□□ 2.05
POLR2J3-202ENST00000443430 CCDC93Q567U6 631 aa27.88■■■□□ 2.05
POLR2J3-202ENST00000443430 NPC1L1Q9UHC9 1359 aa27.87■■■□□ 2.05
POLR2J3-202ENST00000443430 PRAMEF22A3QJZ6 481 aa27.87■■■□□ 2.05
POLR2J3-202ENST00000443430 KLRG2A4D1S0 409 aaPredicted RBP27.86■■■□□ 2.05
POLR2J3-202ENST00000443430 ITGBL1O95965 494 aaPredicted RBP27.86■■■□□ 2.05
POLR2J3-202ENST00000443430 NPR1P16066 1061 aa27.86■■■□□ 2.05
POLR2J3-202ENST00000443430 CNGB1Q14028 1251 aaPredicted RBP27.86■■■□□ 2.05
POLR2J3-202ENST00000443430 FKBP4Q02790 459 aaKnown RBP eCLIP27.85■■■□□ 2.05
POLR2J3-202ENST00000443430 PRKAR2BP31323 418 aa27.84■■■□□ 2.05
POLR2J3-202ENST00000443430 RSPH6AQ9H0K4 717 aa27.84■■■□□ 2.05
POLR2J3-202ENST00000443430 ZNF652Q9Y2D9 606 aa27.84■■■□□ 2.05
POLR2J3-202ENST00000443430 ZNF541Q9H0D2 1346 aa27.84■■■□□ 2.05
POLR2J3-202ENST00000443430 TMEM88BA6NKF7 163 aa27.83■■■□□ 2.05
POLR2J3-202ENST00000443430 OLFM4Q6UX06 510 aa27.83■■■□□ 2.05
POLR2J3-202ENST00000443430 CCER1Q8TC90 406 aaPredicted RBP27.83■■■□□ 2.05
POLR2J3-202ENST00000443430 PRDM10Q9NQV6 1147 aa27.83■■■□□ 2.05
POLR2J3-202ENST00000443430 ZNF277Q9NRM2 450 aaPredicted RBP27.83■■■□□ 2.05
POLR2J3-202ENST00000443430 SNRPA1P09661 255 aaKnown RBP27.82■■■□□ 2.04
POLR2J3-202ENST00000443430 VEGFBP49765 207 aa27.82■■■□□ 2.04
POLR2J3-202ENST00000443430 EAPPQ56P03 285 aaPredicted RBP27.82■■■□□ 2.04
POLR2J3-202ENST00000443430 TPTE2Q6XPS3 522 aa27.82■■■□□ 2.04
POLR2J3-202ENST00000443430 HACL1Q9UJ83 578 aa27.81■■■□□ 2.04
POLR2J3-202ENST00000443430 NBPF26B4DH59 902 aa27.8■■■□□ 2.04
POLR2J3-202ENST00000443430 NBPF10Q6P3W6 841 aaKnown RBP27.8■■■□□ 2.04
POLR2J3-202ENST00000443430 NBPF15Q8N660 670 aa27.8■■■□□ 2.04
POLR2J3-202ENST00000443430 NIP7Q9Y221 180 aaKnown RBP eCLIP27.8■■■□□ 2.04
POLR2J3-202ENST00000443430 ADAMTSL1Q8N6G6 1762 aa27.8■■■□□ 2.04
POLR2J3-202ENST00000443430 RGL2O15211 777 aa27.79■■■□□ 2.04
POLR2J3-202ENST00000443430 RTKN2Q8IZC4 609 aa27.79■■■□□ 2.04
POLR2J3-202ENST00000443430 EPHX2P34913 555 aa27.78■■■□□ 2.04
POLR2J3-202ENST00000443430 CTCFP49711 727 aaPredicted RBP27.78■■■□□ 2.04
POLR2J3-202ENST00000443430 CLEC11AQ9Y240 323 aa27.78■■■□□ 2.04
POLR2J3-202ENST00000443430 FZD9O00144 591 aa27.77■■■□□ 2.04
POLR2J3-202ENST00000443430 MCM10Q7L590 875 aa27.77■■■□□ 2.04
POLR2J3-202ENST00000443430 AIDAQ96BJ3 306 aa27.77■■■□□ 2.04
POLR2J3-202ENST00000443430 FAM177BA6PVY3 158 aa27.76■■■□□ 2.03
POLR2J3-202ENST00000443430 WBP1LQ9NX94 342 aa27.76■■■□□ 2.03
POLR2J3-202ENST00000443430 RNF123Q5XPI4 1314 aa27.75■■■□□ 2.03
POLR2J3-202ENST00000443430 IARSP41252 1262 aaKnown RBP27.75■■■□□ 2.03
POLR2J3-202ENST00000443430 PNMA8AQ86V59 439 aaPredicted RBP27.75■■■□□ 2.03
POLR2J3-202ENST00000443430 SYNE4Q8N205 404 aa27.75■■■□□ 2.03
POLR2J3-202ENST00000443430 RTF1Q92541 710 aaKnown RBP27.75■■■□□ 2.03
POLR2J3-202ENST00000443430 ALDH1B1P30837 517 aa27.74■■■□□ 2.03
POLR2J3-202ENST00000443430 HLFQ16534 295 aa27.74■■■□□ 2.03
POLR2J3-202ENST00000443430 MAP1SQ66K74 1059 aaPredicted RBP27.74■■■□□ 2.03
POLR2J3-202ENST00000443430 CNTROBQ8N137 903 aa27.74■■■□□ 2.03
POLR2J3-202ENST00000443430 CFAP53Q96M91 514 aa27.74■■■□□ 2.03
POLR2J3-202ENST00000443430 RASSF10A6NK89 507 aa27.72■■■□□ 2.03
POLR2J3-202ENST00000443430 DCTN1Q14203 1278 aa27.72■■■□□ 2.03
POLR2J3-202ENST00000443430 GPC2Q8N158 579 aa27.72■■■□□ 2.03
POLR2J3-202ENST00000443430 SNED1Q8TER0 1413 aa27.72■■■□□ 2.03
POLR2J3-202ENST00000443430 LBX1P52954 281 aa27.71■■■□□ 2.03
POLR2J3-202ENST00000443430 DEFB115Q30KQ5 88 aa27.71■■■□□ 2.03
POLR2J3-202ENST00000443430 NUDCQ9Y266 331 aa27.71■■■□□ 2.03
POLR2J3-202ENST00000443430 GTF2E1P29083 439 aaPredicted RBP27.7■■■□□ 2.02
POLR2J3-202ENST00000443430 PSMD1Q99460 953 aa27.7■■■□□ 2.02
POLR2J3-202ENST00000443430 U2AF1L5P0DN76 240 aaPredicted RBP27.69■■■□□ 2.02
POLR2J3-202ENST00000443430 U2AF1Q01081 240 aaKnown RBP eCLIP27.69■■■□□ 2.02
POLR2J3-202ENST00000443430 CRY2Q49AN0 593 aa27.69■■■□□ 2.02
POLR2J3-202ENST00000443430 HTATSF1O43719 755 aaKnown RBP27.67■■■□□ 2.02
POLR2J3-202ENST00000443430 JDP2Q8WYK2 163 aa27.67■■■□□ 2.02
POLR2J3-202ENST00000443430 ABCC12Q96J65 1359 aa27.67■■■□□ 2.02
POLR2J3-202ENST00000443430 COL4A5P29400 1685 aa27.66■■■□□ 2.02
POLR2J3-202ENST00000443430 TAF7Q15545 349 aaPredicted RBP27.66■■■□□ 2.02
POLR2J3-202ENST00000443430 NUTM1Q86Y26 1132 aa27.66■■■□□ 2.02
POLR2J3-202ENST00000443430 NUP98P52948 1817 aa27.66■■■□□ 2.02
POLR2J3-202ENST00000443430 WDR33Q9C0J8 1336 aaKnown RBP27.66■■■□□ 2.02
POLR2J3-202ENST00000443430 HSPA8P11142 646 aaKnown RBP27.65■■■□□ 2.02
POLR2J3-202ENST00000443430 CC2D2BQ6DHV5 1058 aa27.65■■■□□ 2.02
POLR2J3-202ENST00000443430 MIS18AQ9NYP9 233 aa27.65■■■□□ 2.02
POLR2J3-202ENST00000443430 LAMB4A4D0S4 1761 aa27.64■■■□□ 2.02
POLR2J3-202ENST00000443430 NYXQ9GZU5 481 aa27.64■■■□□ 2.02
POLR2J3-202ENST00000443430 DDX21Q9NR30 783 aaKnown RBP eCLIP27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms