RNA–Protein interactions for RNA: ENST00000443003.2

RPSA-202, Transcript of ribosomal protein SA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RPSA, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-202ENST00000443003 TEFQ10587 303 aa10.08□□□□□ -0.8
RPSA-202ENST00000443003 CNGB1Q14028 1251 aaPredicted RBP10.08□□□□□ -0.8
RPSA-202ENST00000443003 CNKSR1Q969H4 720 aa10.08□□□□□ -0.8
RPSA-202ENST00000443003 ZNF496Q96IT1 587 aaPredicted RBP10.08□□□□□ -0.8
RPSA-202ENST00000443003 SETDB2Q96T68 719 aa10.08□□□□□ -0.8
RPSA-202ENST00000443003 PDZRN3Q9UPQ7 1066 aa10.08□□□□□ -0.8
RPSA-202ENST00000443003 CLEC11AQ9Y240 323 aa10.08□□□□□ -0.8
RPSA-202ENST00000443003 HEG1Q9ULI3 1381 aa10.08□□□□□ -0.8
RPSA-202ENST00000443003 ADAMTSL1Q8N6G6 1762 aa10.08□□□□□ -0.8
RPSA-202ENST00000443003 PIP4K2AP48426 406 aaPredicted RBP10.07□□□□□ -0.8
RPSA-202ENST00000443003 CTCFP49711 727 aaPredicted RBP10.07□□□□□ -0.8
RPSA-202ENST00000443003 VEGFBP49765 207 aa10.07□□□□□ -0.8
RPSA-202ENST00000443003 SOGA3Q5TF21 947 aa10.07□□□□□ -0.8
RPSA-202ENST00000443003 LDHDQ86WU2 507 aa10.07□□□□□ -0.8
RPSA-202ENST00000443003 PASKQ96RG2 1323 aa10.07□□□□□ -0.8
RPSA-202ENST00000443003 ZNF541Q9H0D2 1346 aa10.07□□□□□ -0.8
RPSA-202ENST00000443003 TMEM88BA6NKF7 163 aa10.06□□□□□ -0.8
RPSA-202ENST00000443003 DIAPH1O60610 1272 aaKnown RBP10.06□□□□□ -0.8
RPSA-202ENST00000443003 IL6STP40189 918 aaPredicted RBP10.06□□□□□ -0.8
RPSA-202ENST00000443003 LBX1P52954 281 aa10.06□□□□□ -0.8
RPSA-202ENST00000443003 STYK1Q6J9G0 422 aa10.06□□□□□ -0.8
RPSA-202ENST00000443003 ZNF790Q6PG37 636 aa10.06□□□□□ -0.8
RPSA-202ENST00000443003 MASTLQ96GX5 879 aa10.06□□□□□ -0.8
RPSA-202ENST00000443003 TAF1DQ9H5J8 278 aaPredicted RBP10.06□□□□□ -0.8
RPSA-202ENST00000443003 RNF123Q5XPI4 1314 aa10.06□□□□□ -0.8
RPSA-202ENST00000443003 U2SURPO15042 1029 aaKnown RBP10.05□□□□□ -0.8
RPSA-202ENST00000443003 CAMTA2O94983 1202 aa10.05□□□□□ -0.8
RPSA-202ENST00000443003 A1BGP04217 495 aa10.05□□□□□ -0.8
RPSA-202ENST00000443003 SRGNP10124 158 aa10.05□□□□□ -0.8
RPSA-202ENST00000443003 CCDC93Q567U6 631 aa10.05□□□□□ -0.8
RPSA-202ENST00000443003 CC2D1BQ5T0F9 858 aaKnown RBP10.05□□□□□ -0.8
RPSA-202ENST00000443003 OLFM4Q6UX06 510 aa10.05□□□□□ -0.8
RPSA-202ENST00000443003 NBPF5PQ86XG9 351 aaPredicted RBP10.05□□□□□ -0.8
RPSA-202ENST00000443003 DZIP3Q86Y13 1208 aaKnown RBP10.05□□□□□ -0.8
RPSA-202ENST00000443003 PRDM10Q9NQV6 1147 aa10.05□□□□□ -0.8
RPSA-202ENST00000443003 ZNF277Q9NRM2 450 aaPredicted RBP10.05□□□□□ -0.8
RPSA-202ENST00000443003 TRPM7Q96QT4 1865 aa10.04□□□□□ -0.8
RPSA-202ENST00000443003 FAM177BA6PVY3 158 aa10.04□□□□□ -0.8
RPSA-202ENST00000443003 EPHX2P34913 555 aa10.04□□□□□ -0.8
RPSA-202ENST00000443003 GRM1Q13255 1194 aa10.04□□□□□ -0.8
RPSA-202ENST00000443003 AMER1Q5JTC6 1135 aaPredicted RBP10.04□□□□□ -0.8
RPSA-202ENST00000443003 MAP1SQ66K74 1059 aaPredicted RBP10.04□□□□□ -0.8
RPSA-202ENST00000443003 PAXIP1Q6ZW49 1069 aaPredicted RBP10.04□□□□□ -0.8
RPSA-202ENST00000443003 L3MBTL3Q96JM7 780 aaPredicted RBP10.04□□□□□ -0.8
RPSA-202ENST00000443003 FMNL2Q96PY5 1086 aa10.04□□□□□ -0.8
RPSA-202ENST00000443003 TEX13AQ9BXU3 409 aaPredicted RBP10.04□□□□□ -0.8
RPSA-202ENST00000443003 HACL1Q9UJ83 578 aa10.04□□□□□ -0.8
RPSA-202ENST00000443003 ABT1Q9ULW3 272 aaKnown RBP10.04□□□□□ -0.8
RPSA-202ENST00000443003 COL3A1P02461 1466 aaPredicted RBP10.04□□□□□ -0.8
RPSA-202ENST00000443003 LAMB4A4D0S4 1761 aa10.03□□□□□ -0.8
RPSA-202ENST00000443003 GNAT3A8MTJ3 354 aa10.03□□□□□ -0.8
RPSA-202ENST00000443003 ITGBL1O95965 494 aaPredicted RBP10.03□□□□□ -0.8
RPSA-202ENST00000443003 FKBP4Q02790 459 aaKnown RBP eCLIP10.03□□□□□ -0.8
RPSA-202ENST00000443003 FAM161AQ3B820 660 aa10.03□□□□□ -0.8
RPSA-202ENST00000443003 IL17REQ8NFR9 667 aa10.03□□□□□ -0.8
RPSA-202ENST00000443003 GAS2L2Q8NHY3 880 aa10.03□□□□□ -0.8
RPSA-202ENST00000443003 RNF216Q9NWF9 866 aaPredicted RBP10.03□□□□□ -0.8
RPSA-202ENST00000443003 THSD7BQ9C0I4 1608 aa10.03□□□□□ -0.8
RPSA-202ENST00000443003 LTBP1Q14766 1721 aa10.02□□□□□ -0.8
RPSA-202ENST00000443003 ZNF316A6NFI3 1004 aaPredicted RBP10.02□□□□□ -0.81
RPSA-202ENST00000443003 BTBD11A6QL63 1104 aa10.02□□□□□ -0.81
RPSA-202ENST00000443003 KCNQ3O43525 872 aa10.02□□□□□ -0.81
RPSA-202ENST00000443003 HSPA8P11142 646 aaKnown RBP10.02□□□□□ -0.81
RPSA-202ENST00000443003 NPR1P16066 1061 aa10.02□□□□□ -0.81
RPSA-202ENST00000443003 HOXD11P31277 338 aaPredicted RBP10.02□□□□□ -0.81
RPSA-202ENST00000443003 DEFB115Q30KQ5 88 aa10.02□□□□□ -0.81
RPSA-202ENST00000443003 ABHD8Q96I13 439 aa10.02□□□□□ -0.81
RPSA-202ENST00000443003 WBP1LQ9NX94 342 aa10.02□□□□□ -0.81
RPSA-202ENST00000443003 ZNF652Q9Y2D9 606 aa10.02□□□□□ -0.81
RPSA-202ENST00000443003 NUP98P52948 1817 aa10.01□□□□□ -0.81
RPSA-202ENST00000443003 PRAMEF22A3QJZ6 481 aa10.01□□□□□ -0.81
RPSA-202ENST00000443003 IARSP41252 1262 aaKnown RBP10.01□□□□□ -0.81
RPSA-202ENST00000443003 CNTROBQ8N137 903 aa10.01□□□□□ -0.81
RPSA-202ENST00000443003 NIP7Q9Y221 180 aaKnown RBP eCLIP10.01□□□□□ -0.81
RPSA-202ENST00000443003 GJA3Q9Y6H8 435 aa10.01□□□□□ -0.81
RPSA-202ENST00000443003 WDR33Q9C0J8 1336 aaKnown RBP10.01□□□□□ -0.81
RPSA-202ENST00000443003 COL4A5P29400 1685 aa10□□□□□ -0.81
RPSA-202ENST00000443003 RASSF10A6NK89 507 aa10□□□□□ -0.81
RPSA-202ENST00000443003 GTF2E1P29083 439 aaPredicted RBP10□□□□□ -0.81
RPSA-202ENST00000443003 PNMA8AQ86V59 439 aaPredicted RBP10□□□□□ -0.81
RPSA-202ENST00000443003 C7orf43Q8WVR3 580 aa10□□□□□ -0.81
RPSA-202ENST00000443003 USP16Q9Y5T5 823 aa10□□□□□ -0.81
RPSA-202ENST00000443003 CCDC85CA6NKD9 419 aa9.99□□□□□ -0.81
RPSA-202ENST00000443003 LMOD1P29536 600 aaPredicted RBP9.99□□□□□ -0.81
RPSA-202ENST00000443003 MAP2K1Q02750 393 aaPredicted RBP9.99□□□□□ -0.81
RPSA-202ENST00000443003 TPTE2Q6XPS3 522 aa9.99□□□□□ -0.81
RPSA-202ENST00000443003 RTKN2Q8IZC4 609 aa9.99□□□□□ -0.81
RPSA-202ENST00000443003 SYNE4Q8N205 404 aa9.99□□□□□ -0.81
RPSA-202ENST00000443003 JDP2Q8WYK2 163 aa9.99□□□□□ -0.81
RPSA-202ENST00000443003 CFAP44Q96MT7 982 aa9.99□□□□□ -0.81
RPSA-202ENST00000443003 BEGAINQ9BUH8 593 aa9.99□□□□□ -0.81
RPSA-202ENST00000443003 TSKSQ9UJT2 592 aa9.99□□□□□ -0.81
RPSA-202ENST00000443003 CEMIPQ8WUJ3 1361 aa9.99□□□□□ -0.81
RPSA-202ENST00000443003 CASP8AP2Q9UKL3 1982 aa9.98□□□□□ -0.81
RPSA-202ENST00000443003 SLC34A2O95436 690 aa9.98□□□□□ -0.81
RPSA-202ENST00000443003 PRKAR2BP31323 418 aa9.98□□□□□ -0.81
RPSA-202ENST00000443003 EIF6P56537 245 aaKnown RBP9.98□□□□□ -0.81
RPSA-202ENST00000443003 FMR1Q06787 632 aaKnown RBP eCLIP9.98□□□□□ -0.81
RPSA-202ENST00000443003 GPC2Q8N158 579 aa9.98□□□□□ -0.81
RPSA-202ENST00000443003 DDX21Q9NR30 783 aaKnown RBP eCLIP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms