RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 KCNQ3O43525 872 aa17.25■□□□□ 0.35
TRIM13-205ENST00000442421 ST5P78524 1137 aa17.25■□□□□ 0.35
TRIM13-205ENST00000442421 CHADLQ6NUI6 762 aa17.25■□□□□ 0.35
TRIM13-205ENST00000442421 PRPF40BQ6NWY9 871 aaKnown RBP17.25■□□□□ 0.35
TRIM13-205ENST00000442421 CNKSR1Q969H4 720 aa17.25■□□□□ 0.35
TRIM13-205ENST00000442421 MKRN1Q9UHC7 482 aaKnown RBP17.25■□□□□ 0.35
TRIM13-205ENST00000442421 SRGNP10124 158 aa17.24■□□□□ 0.35
TRIM13-205ENST00000442421 PIP4K2AP48426 406 aaPredicted RBP17.24■□□□□ 0.35
TRIM13-205ENST00000442421 STYK1Q6J9G0 422 aa17.24■□□□□ 0.35
TRIM13-205ENST00000442421 NPM2Q86SE8 214 aaKnown RBP17.24■□□□□ 0.35
TRIM13-205ENST00000442421 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
TRIM13-205ENST00000442421 CEMIPQ8WUJ3 1361 aa17.24■□□□□ 0.35
TRIM13-205ENST00000442421 DZIP3Q86Y13 1208 aaKnown RBP17.23■□□□□ 0.35
TRIM13-205ENST00000442421 CREBZFQ9NS37 354 aa17.23■□□□□ 0.35
TRIM13-205ENST00000442421 BTBD11A6QL63 1104 aa17.22■□□□□ 0.35
TRIM13-205ENST00000442421 MASTLQ96GX5 879 aa17.22■□□□□ 0.35
TRIM13-205ENST00000442421 PRAMEF22A3QJZ6 481 aa17.21■□□□□ 0.35
TRIM13-205ENST00000442421 SOGA3Q5TF21 947 aa17.21■□□□□ 0.35
TRIM13-205ENST00000442421 PHACTR3Q96KR7 559 aa17.21■□□□□ 0.35
TRIM13-205ENST00000442421 USP16Q9Y5T5 823 aa17.21■□□□□ 0.35
TRIM13-205ENST00000442421 NBPF5PQ86XG9 351 aaPredicted RBP17.2■□□□□ 0.34
TRIM13-205ENST00000442421 NPC1L1Q9UHC9 1359 aa17.19■□□□□ 0.34
TRIM13-205ENST00000442421 PRKAR2BP31323 418 aa17.19■□□□□ 0.34
TRIM13-205ENST00000442421 C7orf43Q8WVR3 580 aa17.19■□□□□ 0.34
TRIM13-205ENST00000442421 CNTNAP1P78357 1384 aa17.18■□□□□ 0.34
TRIM13-205ENST00000442421 ADAMTSL1Q8N6G6 1762 aa17.18■□□□□ 0.34
TRIM13-205ENST00000442421 IQCA1LA6NCM1 817 aa17.18■□□□□ 0.34
TRIM13-205ENST00000442421 CCDC93Q567U6 631 aa17.18■□□□□ 0.34
TRIM13-205ENST00000442421 OLFM4Q6UX06 510 aa17.18■□□□□ 0.34
TRIM13-205ENST00000442421 RSPH6AQ9H0K4 717 aa17.18■□□□□ 0.34
TRIM13-205ENST00000442421 TAF1DQ9H5J8 278 aaPredicted RBP17.18■□□□□ 0.34
TRIM13-205ENST00000442421 PASKQ96RG2 1323 aa17.18■□□□□ 0.34
TRIM13-205ENST00000442421 ZNF541Q9H0D2 1346 aa17.18■□□□□ 0.34
TRIM13-205ENST00000442421 LAMB4A4D0S4 1761 aa17.17■□□□□ 0.34
TRIM13-205ENST00000442421 LDHDQ86WU2 507 aa17.17■□□□□ 0.34
TRIM13-205ENST00000442421 L3MBTL3Q96JM7 780 aaPredicted RBP17.17■□□□□ 0.34
TRIM13-205ENST00000442421 NUP98P52948 1817 aa17.17■□□□□ 0.34
TRIM13-205ENST00000442421 FAM177BA6PVY3 158 aa17.16■□□□□ 0.34
TRIM13-205ENST00000442421 FOXN1O15353 648 aa17.16■□□□□ 0.34
TRIM13-205ENST00000442421 NPR1P16066 1061 aa17.16■□□□□ 0.34
TRIM13-205ENST00000442421 EAPPQ56P03 285 aaPredicted RBP17.16■□□□□ 0.34
TRIM13-205ENST00000442421 CLEC4GQ6UXB4 293 aa17.16■□□□□ 0.34
TRIM13-205ENST00000442421 ZNF277Q9NRM2 450 aaPredicted RBP17.16■□□□□ 0.34
TRIM13-205ENST00000442421 ZNF652Q9Y2D9 606 aa17.16■□□□□ 0.34
TRIM13-205ENST00000442421 DLG5Q8TDM6 1919 aa17.15■□□□□ 0.34
TRIM13-205ENST00000442421 SNRPA1P09661 255 aaKnown RBP17.15■□□□□ 0.34
TRIM13-205ENST00000442421 FKBP4Q02790 459 aaKnown RBP eCLIP17.15■□□□□ 0.34
TRIM13-205ENST00000442421 MCM10Q7L590 875 aa17.15■□□□□ 0.34
TRIM13-205ENST00000442421 NIP7Q9Y221 180 aaKnown RBP eCLIP17.15■□□□□ 0.34
TRIM13-205ENST00000442421 KLRG2A4D1S0 409 aaPredicted RBP17.14■□□□□ 0.33
TRIM13-205ENST00000442421 NBPF26B4DH59 902 aa17.14■□□□□ 0.33
TRIM13-205ENST00000442421 NBPF10Q6P3W6 841 aaKnown RBP17.14■□□□□ 0.33
TRIM13-205ENST00000442421 NBPF15Q8N660 670 aa17.14■□□□□ 0.33
TRIM13-205ENST00000442421 ITGBL1O95965 494 aaPredicted RBP17.13■□□□□ 0.33
TRIM13-205ENST00000442421 VEGFBP49765 207 aa17.13■□□□□ 0.33
TRIM13-205ENST00000442421 TPTE2Q6XPS3 522 aa17.13■□□□□ 0.33
TRIM13-205ENST00000442421 CFAP53Q96M91 514 aa17.13■□□□□ 0.33
TRIM13-205ENST00000442421 HACL1Q9UJ83 578 aa17.13■□□□□ 0.33
TRIM13-205ENST00000442421 TMEM88BA6NKF7 163 aa17.12■□□□□ 0.33
TRIM13-205ENST00000442421 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
TRIM13-205ENST00000442421 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
TRIM13-205ENST00000442421 CLEC11AQ9Y240 323 aa17.12■□□□□ 0.33
TRIM13-205ENST00000442421 RNF123Q5XPI4 1314 aa17.12■□□□□ 0.33
TRIM13-205ENST00000442421 KDM3BQ7LBC6 1761 aa17.11■□□□□ 0.33
TRIM13-205ENST00000442421 EPHX2P34913 555 aa17.11■□□□□ 0.33
TRIM13-205ENST00000442421 HLFQ16534 295 aa17.11■□□□□ 0.33
TRIM13-205ENST00000442421 RTKN2Q8IZC4 609 aa17.11■□□□□ 0.33
TRIM13-205ENST00000442421 U2AF1L5P0DN76 240 aaPredicted RBP17.1■□□□□ 0.33
TRIM13-205ENST00000442421 IARSP41252 1262 aaKnown RBP17.1■□□□□ 0.33
TRIM13-205ENST00000442421 U2AF1Q01081 240 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRIM13-205ENST00000442421 AIDAQ96BJ3 306 aa17.1■□□□□ 0.33
TRIM13-205ENST00000442421 PRDM10Q9NQV6 1147 aa17.1■□□□□ 0.33
TRIM13-205ENST00000442421 COL4A5P29400 1685 aa17.1■□□□□ 0.33
TRIM13-205ENST00000442421 LTBP1Q14766 1721 aa17.1■□□□□ 0.33
TRIM13-205ENST00000442421 GTF2E1P29083 439 aaPredicted RBP17.09■□□□□ 0.33
TRIM13-205ENST00000442421 CTCFP49711 727 aaPredicted RBP17.09■□□□□ 0.33
TRIM13-205ENST00000442421 MAP1SQ66K74 1059 aaPredicted RBP17.09■□□□□ 0.33
TRIM13-205ENST00000442421 SYNE4Q8N205 404 aa17.09■□□□□ 0.33
TRIM13-205ENST00000442421 NUDCQ9Y266 331 aa17.09■□□□□ 0.33
TRIM13-205ENST00000442421 ABCC12Q96J65 1359 aa17.09■□□□□ 0.33
TRIM13-205ENST00000442421 SNED1Q8TER0 1413 aa17.09■□□□□ 0.33
TRIM13-205ENST00000442421 TRPM7Q96QT4 1865 aa17.09■□□□□ 0.33
TRIM13-205ENST00000442421 FZD9O00144 591 aa17.08■□□□□ 0.32
TRIM13-205ENST00000442421 RGL2O15211 777 aa17.08■□□□□ 0.32
TRIM13-205ENST00000442421 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.32
TRIM13-205ENST00000442421 ALDH1B1P30837 517 aa17.07■□□□□ 0.32
TRIM13-205ENST00000442421 PNMA8AQ86V59 439 aaPredicted RBP17.07■□□□□ 0.32
TRIM13-205ENST00000442421 NUTM1Q86Y26 1132 aa17.07■□□□□ 0.32
TRIM13-205ENST00000442421 CNTROBQ8N137 903 aa17.07■□□□□ 0.32
TRIM13-205ENST00000442421 NGEFQ8N5V2 710 aa17.07■□□□□ 0.32
TRIM13-205ENST00000442421 LBX1P52954 281 aa17.06■□□□□ 0.32
TRIM13-205ENST00000442421 GPC2Q8N158 579 aa17.06■□□□□ 0.32
TRIM13-205ENST00000442421 WBP1LQ9NX94 342 aa17.06■□□□□ 0.32
TRIM13-205ENST00000442421 RASSF10A6NK89 507 aa17.05■□□□□ 0.32
TRIM13-205ENST00000442421 PPP2R1AP30153 589 aa17.05■□□□□ 0.32
TRIM13-205ENST00000442421 TAF7Q15545 349 aaPredicted RBP17.05■□□□□ 0.32
TRIM13-205ENST00000442421 CRY2Q49AN0 593 aa17.05■□□□□ 0.32
TRIM13-205ENST00000442421 SLC51AQ86UW1 340 aa17.05■□□□□ 0.32
TRIM13-205ENST00000442421 JDP2Q8WYK2 163 aa17.05■□□□□ 0.32
TRIM13-205ENST00000442421 PSMD1Q99460 953 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms