RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 PRPF40BQ6NWY9 871 aaKnown RBP15.84■□□□□ 0.13
SLC48A1-201ENST00000442218 ZNF530Q6P9A1 599 aaPredicted RBP15.84■□□□□ 0.13
SLC48A1-201ENST00000442218 GIMAP6Q6P9H5 292 aa15.84■□□□□ 0.13
SLC48A1-201ENST00000442218 ZMYND15Q9H091 742 aa15.84■□□□□ 0.13
SLC48A1-201ENST00000442218 NDUFB9Q9Y6M9 179 aa15.84■□□□□ 0.13
SLC48A1-201ENST00000442218 MST1RQ04912 1400 aa15.84■□□□□ 0.13
SLC48A1-201ENST00000442218 KDRP35968 1356 aa15.84■□□□□ 0.13
SLC48A1-201ENST00000442218 STRCQ7RTU9 1775 aa15.84■□□□□ 0.13
SLC48A1-201ENST00000442218 PTH1RQ03431 593 aa15.84■□□□□ 0.13
SLC48A1-201ENST00000442218 SNX14Q9Y5W7 946 aa15.84■□□□□ 0.13
SLC48A1-201ENST00000442218 NFAT5O94916 1531 aa15.84■□□□□ 0.13
SLC48A1-201ENST00000442218 CABLES1Q8TDN4 633 aa15.84■□□□□ 0.13
SLC48A1-201ENST00000442218 LTN1O94822 1766 aa15.83■□□□□ 0.13
SLC48A1-201ENST00000442218 NOL7Q9UMY1 257 aaKnown RBP15.83■□□□□ 0.12
SLC48A1-201ENST00000442218 RRP9O43818 475 aaKnown RBP15.83■□□□□ 0.12
SLC48A1-201ENST00000442218 GCP02774 474 aa15.83■□□□□ 0.12
SLC48A1-201ENST00000442218 MAP3K5Q99683 1374 aa15.82■□□□□ 0.12
SLC48A1-201ENST00000442218 RUFY3Q7L099 469 aa15.82■□□□□ 0.12
SLC48A1-201ENST00000442218 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.82■□□□□ 0.127e-9■■□□□ 13.1
SLC48A1-201ENST00000442218 KCNJ4P48050 445 aa15.82■□□□□ 0.12
SLC48A1-201ENST00000442218 FOSBP53539 338 aa15.82■□□□□ 0.12
SLC48A1-201ENST00000442218 SPC24Q8NBT2 197 aa15.82■□□□□ 0.12
SLC48A1-201ENST00000442218 IP6K1Q92551 441 aa15.82■□□□□ 0.12
SLC48A1-201ENST00000442218 JAKMIP1Q96N16 626 aaKnown RBP15.82■□□□□ 0.12
SLC48A1-201ENST00000442218 CCDC8Q9H0W5 538 aaPredicted RBP15.82■□□□□ 0.12
SLC48A1-201ENST00000442218 ZKSCAN5Q9Y2L8 839 aa15.82■□□□□ 0.12
SLC48A1-201ENST00000442218 ZNF335Q9H4Z2 1342 aaPredicted RBP15.82■□□□□ 0.12
SLC48A1-201ENST00000442218 CHGBP05060 677 aa15.81■□□□□ 0.12
SLC48A1-201ENST00000442218 DNM1Q05193 864 aaKnown RBP15.81■□□□□ 0.12
SLC48A1-201ENST00000442218 STK3Q13188 491 aa15.81■□□□□ 0.12
SLC48A1-201ENST00000442218 PI4K2BQ8TCG2 481 aa15.81■□□□□ 0.12
SLC48A1-201ENST00000442218 BTBD11A6QL63 1104 aa15.81■□□□□ 0.12
SLC48A1-201ENST00000442218 SYT1P21579 422 aa15.81■□□□□ 0.12
SLC48A1-201ENST00000442218 CUL4AQ13619 759 aa15.81■□□□□ 0.12
SLC48A1-201ENST00000442218 CAMK4Q16566 473 aa15.81■□□□□ 0.12
SLC48A1-201ENST00000442218 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.81■□□□□ 0.12
SLC48A1-201ENST00000442218 EDC3Q96F86 508 aaKnown RBP15.81■□□□□ 0.12
SLC48A1-201ENST00000442218 PDLIM2Q96JY6 352 aa15.81■□□□□ 0.12
SLC48A1-201ENST00000442218 TAOK2Q9UL54 1235 aa15.81■□□□□ 0.12
SLC48A1-201ENST00000442218 TEFQ10587 303 aa15.81■□□□□ 0.12
SLC48A1-201ENST00000442218 KCNH5Q8NCM2 988 aa15.8■□□□□ 0.12
SLC48A1-201ENST00000442218 DIAPH3Q9NSV4 1193 aa15.8■□□□□ 0.12
SLC48A1-201ENST00000442218 SMC3Q9UQE7 1217 aa15.8■□□□□ 0.12
SLC48A1-201ENST00000442218 TAF6LQ9Y6J9 622 aa15.8■□□□□ 0.12
SLC48A1-201ENST00000442218 TRPM3Q9HCF6 1732 aaPredicted RBP15.8■□□□□ 0.12
SLC48A1-201ENST00000442218 MBD3O95983 291 aa15.8■□□□□ 0.12
SLC48A1-201ENST00000442218 HSPA4P34932 840 aa15.8■□□□□ 0.12
SLC48A1-201ENST00000442218 EIF4A1P60842 406 aaKnown RBP15.8■□□□□ 0.12
SLC48A1-201ENST00000442218 CADPS2Q86UW7 1296 aa15.79■□□□□ 0.12
SLC48A1-201ENST00000442218 FAM227BQ96M60 508 aa15.79■□□□□ 0.12
SLC48A1-201ENST00000442218 C9orf78Q9NZ63 289 aaPredicted RBP15.79■□□□□ 0.12
SLC48A1-201ENST00000442218 SGSM2O43147 1006 aa15.79■□□□□ 0.12
SLC48A1-201ENST00000442218 MYL6BP14649 208 aa15.79■□□□□ 0.12
SLC48A1-201ENST00000442218 GLIPR1L2Q4G1C9 344 aa15.78■□□□□ 0.12
SLC48A1-201ENST00000442218 SSH3Q8TE77 659 aa15.78■□□□□ 0.12
SLC48A1-201ENST00000442218 TPM2P07951 284 aa15.78■□□□□ 0.12
SLC48A1-201ENST00000442218 GJB2P29033 226 aa15.78■□□□□ 0.12
SLC48A1-201ENST00000442218 ARHGEF25Q86VW2 580 aa15.78■□□□□ 0.12
SLC48A1-201ENST00000442218 DNAAF4Q8WXU2 420 aa15.78■□□□□ 0.12
SLC48A1-201ENST00000442218 XIRP1Q702N8 1843 aaKnown RBP15.78■□□□□ 0.12
SLC48A1-201ENST00000442218 RPAP1Q9BWH6 1393 aaPredicted RBP15.78■□□□□ 0.12
SLC48A1-201ENST00000442218 STX6O43752 255 aa15.78■□□□□ 0.12
SLC48A1-201ENST00000442218 LSG1Q9H089 658 aaKnown RBP15.78■□□□□ 0.12
SLC48A1-201ENST00000442218 PRDM10Q9NQV6 1147 aa15.78■□□□□ 0.12
SLC48A1-201ENST00000442218 TLR7Q9NYK1 1049 aaKnown RBP15.78■□□□□ 0.12
SLC48A1-201ENST00000442218 KIF1AQ12756 1690 aa15.78■□□□□ 0.12
SLC48A1-201ENST00000442218 WDR33Q9C0J8 1336 aaKnown RBP15.77■□□□□ 0.12
SLC48A1-201ENST00000442218 ADCY5O95622 1261 aa15.77■□□□□ 0.12
SLC48A1-201ENST00000442218 CHRNA2Q15822 529 aa15.77■□□□□ 0.12
SLC48A1-201ENST00000442218 AACSQ86V21 672 aa15.77■□□□□ 0.12
SLC48A1-201ENST00000442218 CNTROBQ8N137 903 aa15.77■□□□□ 0.12
SLC48A1-201ENST00000442218 BOLA2Q9H3K6 86 aa15.77■□□□□ 0.12
SLC48A1-201ENST00000442218 MAP3K2Q9Y2U5 619 aa15.77■□□□□ 0.12
SLC48A1-201ENST00000442218 TFIP11Q9UBB9 837 aaKnown RBP15.77■□□□□ 0.11
SLC48A1-201ENST00000442218 STAP2Q9UGK3 403 aa15.77■□□□□ 0.11
SLC48A1-201ENST00000442218 DCCP43146 1447 aa15.76■□□□□ 0.11
SLC48A1-201ENST00000442218 MCM2P49736 904 aa15.76■□□□□ 0.11
SLC48A1-201ENST00000442218 KIF1BPQ96EK5 621 aa15.76■□□□□ 0.11
SLC48A1-201ENST00000442218 CCDC39Q9UFE4 941 aa15.76■□□□□ 0.11
SLC48A1-201ENST00000442218 RAD50Q92878 1312 aa15.76■□□□□ 0.11
SLC48A1-201ENST00000442218 RGPD2P0DJD1 1756 aa15.76■□□□□ 0.11
SLC48A1-201ENST00000442218 SLIT3O75094 1523 aa15.76■□□□□ 0.11
SLC48A1-201ENST00000442218 ZSCAN22P10073 491 aaPredicted RBP15.76■□□□□ 0.11
SLC48A1-201ENST00000442218 IFIT2P09913 472 aaKnown RBP15.75■□□□□ 0.11
SLC48A1-201ENST00000442218 ANKRD24Q8TF21 1146 aa15.75■□□□□ 0.11
SLC48A1-201ENST00000442218 BEND3Q5T5X7 828 aa15.75■□□□□ 0.11
SLC48A1-201ENST00000442218 CKAP2LQ8IYA6 745 aa15.75■□□□□ 0.11
SLC48A1-201ENST00000442218 PDRG1Q9NUG6 133 aa15.75■□□□□ 0.11
SLC48A1-201ENST00000442218 GOLGB1Q14789 3259 aaKnown RBP15.74■□□□□ 0.11
SLC48A1-201ENST00000442218 PXDNQ92626 1479 aa15.74■□□□□ 0.11
SLC48A1-201ENST00000442218 LIMCH1Q9UPQ0 1083 aa15.74■□□□□ 0.11
SLC48A1-201ENST00000442218 AP5Z1O43299 807 aa15.74■□□□□ 0.11
SLC48A1-201ENST00000442218 CEBPZQ03701 1054 aaKnown RBP15.74■□□□□ 0.11
SLC48A1-201ENST00000442218 SYAP1Q96A49 352 aaPredicted RBP15.74■□□□□ 0.11
SLC48A1-201ENST00000442218 LRRC2Q9BYS8 371 aa15.74■□□□□ 0.11
SLC48A1-201ENST00000442218 ANAPC15P60006 121 aa15.73■□□□□ 0.11
SLC48A1-201ENST00000442218 ME3Q16798 604 aa15.73■□□□□ 0.11
SLC48A1-201ENST00000442218 SLFNL1Q499Z3 407 aa15.73■□□□□ 0.11
SLC48A1-201ENST00000442218 CLASRPQ8N2M8 674 aaKnown RBP15.73■□□□□ 0.11
SLC48A1-201ENST00000442218 DDX11Q96FC9 970 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms