RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 LRRC59Q96AG4 307 aaKnown RBP19.85■□□□□ 0.77
SEMA3B-207ENST00000441915 GPATCH3Q96I76 525 aa19.85■□□□□ 0.77
SEMA3B-207ENST00000441915 ALDH1L1O75891 902 aa19.85■□□□□ 0.77
SEMA3B-207ENST00000441915 ECHDC1Q9NTX5 307 aa19.85■□□□□ 0.77
SEMA3B-207ENST00000441915 ZKSCAN5Q9Y2L8 839 aa19.85■□□□□ 0.77
SEMA3B-207ENST00000441915 MAP3K2Q9Y2U5 619 aa19.85■□□□□ 0.77
SEMA3B-207ENST00000441915 ADGRL3Q9HAR2 1447 aa19.85■□□□□ 0.77
SEMA3B-207ENST00000441915 ZSCAN22P10073 491 aaPredicted RBP19.84■□□□□ 0.77
SEMA3B-207ENST00000441915 ESCO1Q5FWF5 840 aa19.84■□□□□ 0.77
SEMA3B-207ENST00000441915 ERC1Q8IUD2 1116 aa19.84■□□□□ 0.77
SEMA3B-207ENST00000441915 TMEM87AQ8NBN3 555 aa19.84■□□□□ 0.77
SEMA3B-207ENST00000441915 CCDC39Q9UFE4 941 aa19.84■□□□□ 0.77
SEMA3B-207ENST00000441915 LMO7Q8WWI1 1683 aa19.84■□□□□ 0.77
SEMA3B-207ENST00000441915 CASTP20810 708 aaKnown RBP19.84■□□□□ 0.77
SEMA3B-207ENST00000441915 MCM5P33992 734 aa19.84■□□□□ 0.77
SEMA3B-207ENST00000441915 RUFY3Q7L099 469 aa19.84■□□□□ 0.77
SEMA3B-207ENST00000441915 SMC3Q9UQE7 1217 aa19.84■□□□□ 0.77
SEMA3B-207ENST00000441915 TCHHQ07283 1943 aa19.84■□□□□ 0.77
SEMA3B-207ENST00000441915 STX6O43752 255 aa19.83■□□□□ 0.77
SEMA3B-207ENST00000441915 IFIT2P09913 472 aaKnown RBP19.83■□□□□ 0.77
SEMA3B-207ENST00000441915 KSR2Q6VAB6 950 aa19.83■□□□□ 0.77
SEMA3B-207ENST00000441915 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.83■□□□□ 0.77
SEMA3B-207ENST00000441915 CRYBG1Q9Y4K1 1723 aa19.83■□□□□ 0.77
SEMA3B-207ENST00000441915 RNMTO43148 476 aaKnown RBP19.83■□□□□ 0.76
SEMA3B-207ENST00000441915 ATP6V1DQ9Y5K8 247 aa19.83■□□□□ 0.76
SEMA3B-207ENST00000441915 SYT1P21579 422 aa19.82■□□□□ 0.76
SEMA3B-207ENST00000441915 GIGYF1O75420 1035 aaPredicted RBP19.82■□□□□ 0.76
SEMA3B-207ENST00000441915 LARP6Q9BRS8 491 aaKnown RBP19.82■□□□□ 0.76
SEMA3B-207ENST00000441915 RBM33Q96EV2 1170 aaKnown RBP19.82■□□□□ 0.76
SEMA3B-207ENST00000441915 FAM184AQ8NB25 1140 aa19.81■□□□□ 0.76
SEMA3B-207ENST00000441915 CNPY2Q9Y2B0 182 aa19.81■□□□□ 0.76
SEMA3B-207ENST00000441915 NCAPD2Q15021 1401 aa19.81■□□□□ 0.76
SEMA3B-207ENST00000441915 RGPD2P0DJD1 1756 aa19.81■□□□□ 0.76
SEMA3B-207ENST00000441915 EVI5LQ96CN4 794 aa19.81■□□□□ 0.76
SEMA3B-207ENST00000441915 HYPKQ9NX55 129 aa19.81■□□□□ 0.76
SEMA3B-207ENST00000441915 PA2G4Q9UQ80 394 aaKnown RBP19.81■□□□□ 0.76
SEMA3B-207ENST00000441915 TERF1P54274 439 aa19.8■□□□□ 0.76
SEMA3B-207ENST00000441915 CWF19L2Q2TBE0 894 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-207ENST00000441915 VPS53Q5VIR6 699 aa19.8■□□□□ 0.76
SEMA3B-207ENST00000441915 PTH1RQ03431 593 aa19.8■□□□□ 0.76
SEMA3B-207ENST00000441915 PROSER3Q2NL68 480 aa19.8■□□□□ 0.76
SEMA3B-207ENST00000441915 CCDC183Q5T5S1 534 aa19.8■□□□□ 0.76
SEMA3B-207ENST00000441915 JAKMIP1Q96N16 626 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-207ENST00000441915 F13A1P00488 732 aa19.79■□□□□ 0.76
SEMA3B-207ENST00000441915 CPA1P15085 419 aa19.79■□□□□ 0.76
SEMA3B-207ENST00000441915 UBE2HP62256 183 aa19.79■□□□□ 0.76
SEMA3B-207ENST00000441915 PRPF40BQ6NWY9 871 aaKnown RBP19.79■□□□□ 0.76
SEMA3B-207ENST00000441915 TM6SF1Q9BZW5 370 aa19.79■□□□□ 0.76
SEMA3B-207ENST00000441915 PDRG1Q9NUG6 133 aa19.79■□□□□ 0.76
SEMA3B-207ENST00000441915 PHRF1Q9P1Y6 1649 aaKnown RBP19.79■□□□□ 0.76
SEMA3B-207ENST00000441915 LETM1O95202 739 aaPredicted RBP19.79■□□□□ 0.76
SEMA3B-207ENST00000441915 AACSQ86V21 672 aa19.79■□□□□ 0.76
SEMA3B-207ENST00000441915 ZSCAN31Q96LW9 406 aaPredicted RBP19.79■□□□□ 0.76
SEMA3B-207ENST00000441915 CYP46A1Q9Y6A2 500 aa19.79■□□□□ 0.76
SEMA3B-207ENST00000441915 CHD2O14647 1828 aaKnown RBP19.79■□□□□ 0.76
SEMA3B-207ENST00000441915 GCP02774 474 aa19.78■□□□□ 0.76
SEMA3B-207ENST00000441915 ZKSCAN1P17029 563 aaPredicted RBP19.78■□□□□ 0.76
SEMA3B-207ENST00000441915 XPCQ01831 940 aaPredicted RBP19.78■□□□□ 0.76
SEMA3B-207ENST00000441915 ANKLE2Q86XL3 938 aa19.78■□□□□ 0.76
SEMA3B-207ENST00000441915 SH2B1Q9NRF2 756 aaPredicted RBP19.78■□□□□ 0.76
SEMA3B-207ENST00000441915 OVOS2A0A0G2JMS6 1433 aa19.78■□□□□ 0.76
SEMA3B-207ENST00000441915 PTMAP06454 111 aaKnown RBP19.78■□□□□ 0.76
SEMA3B-207ENST00000441915 CCDC83Q8IWF9 413 aa19.78■□□□□ 0.76
SEMA3B-207ENST00000441915 LINS1Q8NG48 757 aa19.78■□□□□ 0.76
SEMA3B-207ENST00000441915 ZSWIM6Q9HCJ5 1215 aa19.78■□□□□ 0.76
SEMA3B-207ENST00000441915 DDX58O95786 925 aaKnown RBP19.77■□□□□ 0.76
SEMA3B-207ENST00000441915 CSPP1Q1MSJ5 1256 aa19.77■□□□□ 0.76
SEMA3B-207ENST00000441915 ADCK5Q3MIX3 580 aa19.77■□□□□ 0.76
SEMA3B-207ENST00000441915 ARHGEF25Q86VW2 580 aa19.77■□□□□ 0.76
SEMA3B-207ENST00000441915 HEG1Q9ULI3 1381 aa19.77■□□□□ 0.76
SEMA3B-207ENST00000441915 PXDNQ92626 1479 aa19.77■□□□□ 0.76
SEMA3B-207ENST00000441915 GRM8O00222 908 aa19.77■□□□□ 0.76
SEMA3B-207ENST00000441915 LARGE1O95461 756 aa19.77■□□□□ 0.76
SEMA3B-207ENST00000441915 UVSSAQ2YD98 709 aa19.77■□□□□ 0.76
SEMA3B-207ENST00000441915 HIP1O00291 1037 aa19.76■□□□□ 0.75
SEMA3B-207ENST00000441915 GJB2P29033 226 aa19.76■□□□□ 0.75
SEMA3B-207ENST00000441915 KCNB2Q92953 911 aa19.76■□□□□ 0.75
SEMA3B-207ENST00000441915 CCDC171Q6TFL3 1326 aa19.76■□□□□ 0.75
SEMA3B-207ENST00000441915 FIBPO43427 364 aa19.76■□□□□ 0.75
SEMA3B-207ENST00000441915 G3BP1Q13283 466 aaKnown RBP eCLIP19.76■□□□□ 0.75
SEMA3B-207ENST00000441915 NECTIN1Q15223 517 aa19.76■□□□□ 0.75
SEMA3B-207ENST00000441915 R3HCC1Q9Y3T6 440 aaKnown RBP19.76■□□□□ 0.75
SEMA3B-207ENST00000441915 PRAMEF22A3QJZ6 481 aa19.75■□□□□ 0.75
SEMA3B-207ENST00000441915 ANKRD24Q8TF21 1146 aa19.75■□□□□ 0.75
SEMA3B-207ENST00000441915 KCNJ4P48050 445 aa19.75■□□□□ 0.75
SEMA3B-207ENST00000441915 SUCLG2Q96I99 432 aa19.75■□□□□ 0.75
SEMA3B-207ENST00000441915 TPRNQ4KMQ1 711 aa19.74■□□□□ 0.75
SEMA3B-207ENST00000441915 PDCL3Q9H2J4 239 aa19.74■□□□□ 0.75
SEMA3B-207ENST00000441915 BICC1Q9H694 974 aaKnown RBP19.74■□□□□ 0.75
SEMA3B-207ENST00000441915 DDX21Q9NR30 783 aaKnown RBP eCLIP19.74■□□□□ 0.75
SEMA3B-207ENST00000441915 UTYO14607 1347 aa19.74■□□□□ 0.75
SEMA3B-207ENST00000441915 SASH1O94885 1247 aa19.74■□□□□ 0.75
SEMA3B-207ENST00000441915 AIMP1Q12904 312 aaKnown RBP19.74■□□□□ 0.75
SEMA3B-207ENST00000441915 RBM8AQ9Y5S9 174 aaKnown RBP19.74■□□□□ 0.75
SEMA3B-207ENST00000441915 LMOD2Q6P5Q4 547 aa19.73■□□□□ 0.75
SEMA3B-207ENST00000441915 EAF2Q96CJ1 260 aaPredicted RBP19.73■□□□□ 0.75
SEMA3B-207ENST00000441915 MTMR6Q9Y217 621 aa19.73■□□□□ 0.75
SEMA3B-207ENST00000441915 CREB3L3Q68CJ9 461 aa19.73■□□□□ 0.75
SEMA3B-207ENST00000441915 KAZALD1Q96I82 304 aa19.73■□□□□ 0.75
SEMA3B-207ENST00000441915 PSMA5P28066 241 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms