RNA–Protein interactions for RNA: ENST00000441867.5

ABCF1-203, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 5

Gene ABCF1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-203ENST00000441867 PRPF40BQ6NWY9 871 aaKnown RBP12.55□□□□□ -0.4
ABCF1-203ENST00000441867 NPM2Q86SE8 214 aaKnown RBP12.55□□□□□ -0.4
ABCF1-203ENST00000441867 MASTLQ96GX5 879 aa12.55□□□□□ -0.4
ABCF1-203ENST00000441867 TEX13AQ9BXU3 409 aaPredicted RBP12.55□□□□□ -0.4
ABCF1-203ENST00000441867 WDR33Q9C0J8 1336 aaKnown RBP12.55□□□□□ -0.4
ABCF1-203ENST00000441867 SRGNP10124 158 aa12.54□□□□□ -0.4
ABCF1-203ENST00000441867 EPHX2P34913 555 aa12.54□□□□□ -0.4
ABCF1-203ENST00000441867 ST5P78524 1137 aa12.54□□□□□ -0.4
ABCF1-203ENST00000441867 CCDC93Q567U6 631 aa12.54□□□□□ -0.4
ABCF1-203ENST00000441867 CNTROBQ8N137 903 aa12.54□□□□□ -0.4
ABCF1-203ENST00000441867 CNBD1Q8NA66 436 aa12.54□□□□□ -0.4
ABCF1-203ENST00000441867 SETDB2Q96T68 719 aa12.54□□□□□ -0.4
ABCF1-203ENST00000441867 LGR6Q9HBX8 967 aa12.54□□□□□ -0.4
ABCF1-203ENST00000441867 ABT1Q9ULW3 272 aaKnown RBP12.54□□□□□ -0.4
ABCF1-203ENST00000441867 DLEC1Q9Y238 1755 aa12.53□□□□□ -0.4
ABCF1-203ENST00000441867 RNMTO43148 476 aaKnown RBP12.53□□□□□ -0.4
ABCF1-203ENST00000441867 ECE1P42892 770 aa12.53□□□□□ -0.4
ABCF1-203ENST00000441867 TTC5Q8N0Z6 440 aa12.53□□□□□ -0.4
ABCF1-203ENST00000441867 IL13P35225 146 aa12.52□□□□□ -0.41
ABCF1-203ENST00000441867 IL6STP40189 918 aaPredicted RBP12.52□□□□□ -0.41
ABCF1-203ENST00000441867 MORC1Q86VD1 984 aa12.52□□□□□ -0.41
ABCF1-203ENST00000441867 C7orf43Q8WVR3 580 aa12.52□□□□□ -0.41
ABCF1-203ENST00000441867 AFDNP55196 1824 aaKnown RBP12.51□□□□□ -0.41
ABCF1-203ENST00000441867 FKBP4Q02790 459 aaKnown RBP eCLIP12.51□□□□□ -0.41
ABCF1-203ENST00000441867 RTKN2Q8IZC4 609 aa12.51□□□□□ -0.41
ABCF1-203ENST00000441867 CCDC24Q8N4L8 307 aa12.51□□□□□ -0.41
ABCF1-203ENST00000441867 CA12O43570 354 aa12.5□□□□□ -0.41
ABCF1-203ENST00000441867 NPR1P16066 1061 aa12.5□□□□□ -0.41
ABCF1-203ENST00000441867 MAP1SQ66K74 1059 aaPredicted RBP12.5□□□□□ -0.41
ABCF1-203ENST00000441867 GPC2Q8N158 579 aa12.5□□□□□ -0.41
ABCF1-203ENST00000441867 POLR3GLQ9BT43 218 aa12.5□□□□□ -0.41
ABCF1-203ENST00000441867 DDX21Q9NR30 783 aaKnown RBP eCLIP12.5□□□□□ -0.41
ABCF1-203ENST00000441867 TBC1D2BQ9UPU7 963 aa12.5□□□□□ -0.41
ABCF1-203ENST00000441867 MRC1P22897 1456 aa12.5□□□□□ -0.41
ABCF1-203ENST00000441867 VIRMAQ69YN4 1812 aaKnown RBP12.5□□□□□ -0.41
ABCF1-203ENST00000441867 ZNF541Q9H0D2 1346 aa12.49□□□□□ -0.41
ABCF1-203ENST00000441867 CAPNS2Q96L46 248 aa12.49□□□□□ -0.41
ABCF1-203ENST00000441867 GPR101Q96P66 508 aaPredicted RBP12.49□□□□□ -0.41
ABCF1-203ENST00000441867 ZNF277Q9NRM2 450 aaPredicted RBP12.49□□□□□ -0.41
ABCF1-203ENST00000441867 ZNF330Q9Y3S2 320 aaPredicted RBP12.49□□□□□ -0.41
ABCF1-203ENST00000441867 FER1L6Q2WGJ9 1857 aa12.48□□□□□ -0.41
ABCF1-203ENST00000441867 FZD9O00144 591 aa12.48□□□□□ -0.41
ABCF1-203ENST00000441867 MAP2K2P36507 400 aa12.48□□□□□ -0.41
ABCF1-203ENST00000441867 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
ABCF1-203ENST00000441867 PANK3Q9H999 370 aa12.48□□□□□ -0.41
ABCF1-203ENST00000441867 DICER1Q9UPY3 1922 aaKnown RBP12.48□□□□□ -0.41
ABCF1-203ENST00000441867 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
ABCF1-203ENST00000441867 SCN4AP35499 1836 aa12.48□□□□□ -0.41
ABCF1-203ENST00000441867 RNF123Q5XPI4 1314 aa12.47□□□□□ -0.41
ABCF1-203ENST00000441867 KLRG2A4D1S0 409 aaPredicted RBP12.47□□□□□ -0.41
ABCF1-203ENST00000441867 CAMTA2O94983 1202 aa12.47□□□□□ -0.41
ABCF1-203ENST00000441867 LMOD1P29536 600 aaPredicted RBP12.47□□□□□ -0.41
ABCF1-203ENST00000441867 CLEC4GQ6UXB4 293 aa12.47□□□□□ -0.41
ABCF1-203ENST00000441867 NBPF5PQ86XG9 351 aaPredicted RBP12.47□□□□□ -0.41
ABCF1-203ENST00000441867 JDP2Q8WYK2 163 aa12.47□□□□□ -0.41
ABCF1-203ENST00000441867 MCOLN1Q9GZU1 580 aa12.47□□□□□ -0.41
ABCF1-203ENST00000441867 ZNF316A6NFI3 1004 aaPredicted RBP12.46□□□□□ -0.41
ABCF1-203ENST00000441867 ALDH1B1P30837 517 aa12.46□□□□□ -0.41
ABCF1-203ENST00000441867 IARSP41252 1262 aaKnown RBP12.46□□□□□ -0.41
ABCF1-203ENST00000441867 TEFQ10587 303 aa12.46□□□□□ -0.41
ABCF1-203ENST00000441867 MTHFSDQ2M296 383 aaKnown RBP12.46□□□□□ -0.41
ABCF1-203ENST00000441867 ZNF790Q6PG37 636 aa12.46□□□□□ -0.41
ABCF1-203ENST00000441867 ZNF496Q96IT1 587 aaPredicted RBP12.46□□□□□ -0.41
ABCF1-203ENST00000441867 ZNF652Q9Y2D9 606 aa12.46□□□□□ -0.41
ABCF1-203ENST00000441867 PDE4DIPQ5VU43 2346 aa12.45□□□□□ -0.42
ABCF1-203ENST00000441867 HEG1Q9ULI3 1381 aa12.45□□□□□ -0.42
ABCF1-203ENST00000441867 RGL2O15211 777 aa12.45□□□□□ -0.42
ABCF1-203ENST00000441867 EIF6P56537 245 aaKnown RBP12.45□□□□□ -0.42
ABCF1-203ENST00000441867 TPTE2Q6XPS3 522 aa12.45□□□□□ -0.42
ABCF1-203ENST00000441867 DZIP3Q86Y13 1208 aaKnown RBP12.45□□□□□ -0.42
ABCF1-203ENST00000441867 FMNL2Q96PY5 1086 aa12.45□□□□□ -0.42
ABCF1-203ENST00000441867 TSKSQ9UJT2 592 aa12.45□□□□□ -0.42
ABCF1-203ENST00000441867 SCN11AQ9UI33 1791 aa12.45□□□□□ -0.42
ABCF1-203ENST00000441867 HMOX1P09601 288 aa12.44□□□□□ -0.42
ABCF1-203ENST00000441867 EIF4G2P78344 907 aaKnown RBP eCLIP12.44□□□□□ -0.42
ABCF1-203ENST00000441867 GRM1Q13255 1194 aa12.44□□□□□ -0.42
ABCF1-203ENST00000441867 GRIPAP1Q4V328 841 aa12.44□□□□□ -0.42
ABCF1-203ENST00000441867 CC2D2BQ6DHV5 1058 aa12.44□□□□□ -0.42
ABCF1-203ENST00000441867 CYP4F22Q6NT55 531 aa12.44□□□□□ -0.42
ABCF1-203ENST00000441867 USP50Q70EL3 339 aaPredicted RBP12.44□□□□□ -0.42
ABCF1-203ENST00000441867 SYNE4Q8N205 404 aa12.44□□□□□ -0.42
ABCF1-203ENST00000441867 PSMD1Q99460 953 aa12.44□□□□□ -0.42
ABCF1-203ENST00000441867 KNSTRNQ9Y448 316 aa12.44□□□□□ -0.42
ABCF1-203ENST00000441867 TLL2Q9Y6L7 1015 aa12.44□□□□□ -0.42
ABCF1-203ENST00000441867 ANKRD31Q8N7Z5 1873 aa12.43□□□□□ -0.42
ABCF1-203ENST00000441867 A1BGP04217 495 aa12.43□□□□□ -0.42
ABCF1-203ENST00000441867 GJA3Q9Y6H8 435 aa12.43□□□□□ -0.42
ABCF1-203ENST00000441867 SLX4Q8IY92 1834 aa12.42□□□□□ -0.42
ABCF1-203ENST00000441867 HHIPL1Q96JK4 782 aa12.42□□□□□ -0.42
ABCF1-203ENST00000441867 COL11A2P13942 1736 aaPredicted RBP12.42□□□□□ -0.42
ABCF1-203ENST00000441867 ADAMTSL1Q8N6G6 1762 aa12.41□□□□□ -0.42
ABCF1-203ENST00000441867 GNAT3A8MTJ3 354 aa12.41□□□□□ -0.42
ABCF1-203ENST00000441867 HSPA5P11021 654 aaKnown RBP12.41□□□□□ -0.42
ABCF1-203ENST00000441867 BRPF1P55201 1214 aaPredicted RBP12.41□□□□□ -0.42
ABCF1-203ENST00000441867 PRPF38BQ5VTL8 546 aaKnown RBP12.41□□□□□ -0.42
ABCF1-203ENST00000441867 CST9Q5W186 159 aa12.41□□□□□ -0.42
ABCF1-203ENST00000441867 GAS2L2Q8NHY3 880 aa12.41□□□□□ -0.42
ABCF1-203ENST00000441867 DIAPH1O60610 1272 aaKnown RBP12.4□□□□□ -0.42
ABCF1-203ENST00000441867 GTF2E1P29083 439 aaPredicted RBP12.4□□□□□ -0.42
ABCF1-203ENST00000441867 DGKZQ13574 1117 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms