RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 SCHIP1Q9P0W5 487 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P9-201ENST00000441799 ELOA3CA0A087WX78 387 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 ELOA3DA6NLF2 546 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 SPATA31C1P0DKV0 1188 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 HSP90B1P14625 803 aaKnown RBP6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 LAMC2Q13753 1193 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 WASHC4Q2M389 1173 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 ELOA3BQ3SY89 546 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 FOXD4L6Q3SYB3 417 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 FOXD4L3Q6VB84 417 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 SYT9Q86SS6 491 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 ELOA3Q8NG57 546 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 PSMG3-AS1Q96PY0 264 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 KRTAP9-2Q9BYQ4 174 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 GJA3Q9Y6H8 435 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 RSPO4Q2I0M5 234 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 NKAPLQ5M9Q1 402 aa6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 LRRC69Q6ZNQ3 347 aa6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 BICDL1Q6ZP65 573 aa6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 L3MBTL2Q969R5 705 aa6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 STARD13Q9Y3M8 1113 aa6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 SHROOM4Q9ULL8 1493 aa6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 EML1O00423 815 aa6.95□□□□□ -1.3
HMGB3P9-201ENST00000441799 SOX11P35716 441 aa6.95□□□□□ -1.3
HMGB3P9-201ENST00000441799 EPHA4P54764 986 aa6.95□□□□□ -1.3
HMGB3P9-201ENST00000441799 SFSWAPQ12872 951 aaKnown RBP6.95□□□□□ -1.3
HMGB3P9-201ENST00000441799 TEAD4Q15561 434 aa6.95□□□□□ -1.3
HMGB3P9-201ENST00000441799 SLC30A3Q99726 388 aa6.95□□□□□ -1.3
HMGB3P9-201ENST00000441799 ZNF358Q9NW07 568 aa6.95□□□□□ -1.3
HMGB3P9-201ENST00000441799 ADARB2-AS1A8MUL3 147 aa6.94□□□□□ -1.3
HMGB3P9-201ENST00000441799 SIN3BO75182 1162 aa6.94□□□□□ -1.3
HMGB3P9-201ENST00000441799 UBTFP17480 764 aaKnown RBP6.94□□□□□ -1.3
HMGB3P9-201ENST00000441799 NOS2P35228 1153 aa6.94□□□□□ -1.3
HMGB3P9-201ENST00000441799 FGD1P98174 961 aa6.94□□□□□ -1.3
HMGB3P9-201ENST00000441799 ZMYM1Q5SVZ6 1142 aa6.94□□□□□ -1.3
HMGB3P9-201ENST00000441799 TPSG1Q9NRR2 321 aa6.94□□□□□ -1.3
HMGB3P9-201ENST00000441799 KRTAP9-6A0A140TA67 174 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 SUPT5HO00267 1087 aaKnown RBP6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 BACH1O14867 736 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 ALAS2P22557 587 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 GTF2IP78347 998 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 TBCELQ5QJ74 424 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 SH3PXD2AQ5TCZ1 1133 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 C8orf86Q6ZUL3 223 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 ALG2Q9H553 416 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 FAM229AH3BQW9 127 aa6.92□□□□□ -1.3
HMGB3P9-201ENST00000441799 SKIP12755 728 aa6.92□□□□□ -1.3
HMGB3P9-201ENST00000441799 EML3Q32P44 896 aa6.92□□□□□ -1.3
HMGB3P9-201ENST00000441799 TNS4Q8IZW8 715 aa6.92□□□□□ -1.3
HMGB3P9-201ENST00000441799 NOD1Q9Y239 953 aa6.92□□□□□ -1.3
HMGB3P9-201ENST00000441799 M0R082 166 aa6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 ALBP02768 609 aa6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 SLC9A9Q8IVB4 645 aa6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 MICALL1Q8N3F8 863 aa6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 ZNF417Q8TAU3 575 aa6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 TNFRSF25Q93038 417 aa6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 ZNF587Q96SQ5 575 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 PRDM6Q9NQX0 595 aa6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 ZBTB7BO15156 539 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 NID1P14543 1247 aa6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 NCOA4Q13772 614 aa6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 MCM6Q14566 821 aa6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 PRRT3Q5FWE3 981 aa6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 C20orf204Q6ZNR8 217 aa6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 DHX37Q8IY37 1157 aaKnown RBP6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 ANP32EQ9BTT0 268 aa6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 SPDYE3A6NKU9 549 aa6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 DYRK3O43781 588 aa6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 LZTS3O60299 673 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 SPEM2Q0P670 501 aa6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 ZNF326Q5BKZ1 582 aaKnown RBP6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 DEPDC4Q8N2C3 294 aa6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 NFATC2IPQ8NCF5 419 aa6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 BCCIPQ9P287 314 aaKnown RBP eCLIP6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 ZNF232Q9UNY5 417 aa6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 COG6Q9Y2V7 657 aa6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 SERTM1A2A2V5 107 aa6.88□□□□□ -1.31
HMGB3P9-201ENST00000441799 APBA3O96018 575 aa6.88□□□□□ -1.31
HMGB3P9-201ENST00000441799 PSME1Q06323 249 aa6.88□□□□□ -1.31
HMGB3P9-201ENST00000441799 GRIK4Q16099 956 aa6.88□□□□□ -1.31
HMGB3P9-201ENST00000441799 RAB44Q7Z6P3 723 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P9-201ENST00000441799 KIAA1024Q9UPX6 916 aa6.88□□□□□ -1.31
HMGB3P9-201ENST00000441799 GPC6Q9Y625 555 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P9-201ENST00000441799 ADH7P40394 386 aa6.87□□□□□ -1.31
HMGB3P9-201ENST00000441799 TRIM28Q13263 835 aaKnown RBP6.87□□□□□ -1.31
HMGB3P9-201ENST00000441799 POTEAQ6S8J7 498 aa6.87□□□□□ -1.31
HMGB3P9-201ENST00000441799 NEUROD4Q9HD90 331 aa6.87□□□□□ -1.31
HMGB3P9-201ENST00000441799 HCN4Q9Y3Q4 1203 aa6.87□□□□□ -1.31
HMGB3P9-201ENST00000441799 KCNQ4P56696 695 aa6.86□□□□□ -1.31
HMGB3P9-201ENST00000441799 C1orf53Q5VUE5 145 aa6.86□□□□□ -1.31
HMGB3P9-201ENST00000441799 ZNF280CQ8ND82 737 aa6.86□□□□□ -1.31
HMGB3P9-201ENST00000441799 RHPN1Q8TCX5 695 aa6.86□□□□□ -1.31
HMGB3P9-201ENST00000441799 HSH2DQ96JZ2 352 aa6.86□□□□□ -1.31
HMGB3P9-201ENST00000441799 SFI1A8K8P3 1242 aa6.85□□□□□ -1.31
HMGB3P9-201ENST00000441799 USP17L5A8MUK1 530 aa6.85□□□□□ -1.31
HMGB3P9-201ENST00000441799 CLDN10P78369 228 aa6.85□□□□□ -1.31
HMGB3P9-201ENST00000441799 PUS7Q96PZ0 661 aaKnown RBP6.85□□□□□ -1.31
HMGB3P9-201ENST00000441799 TSPAN10Q9H1Z9 355 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P9-201ENST00000441799 BRD7Q9NPI1 651 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms