RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 SCHIP1Q9P0W5 487 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P9-201ENST00000441799 ELOA3CA0A087WX78 387 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 ELOA3DA6NLF2 546 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 SPATA31C1P0DKV0 1188 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 HSP90B1P14625 803 aaKnown RBP6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 LAMC2Q13753 1193 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 WASHC4Q2M389 1173 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 ELOA3BQ3SY89 546 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 FOXD4L6Q3SYB3 417 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 FOXD4L3Q6VB84 417 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 SYT9Q86SS6 491 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 ELOA3Q8NG57 546 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 PSMG3-AS1Q96PY0 264 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 KRTAP9-2Q9BYQ4 174 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 GJA3Q9Y6H8 435 aa6.97□□□□□ -1.29
HMGB3P9-201ENST00000441799 RSPO4Q2I0M5 234 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 NKAPLQ5M9Q1 402 aa6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 LRRC69Q6ZNQ3 347 aa6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 BICDL1Q6ZP65 573 aa6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 L3MBTL2Q969R5 705 aa6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 STARD13Q9Y3M8 1113 aa6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 SHROOM4Q9ULL8 1493 aa6.96□□□□□ -1.3
HMGB3P9-201ENST00000441799 EML1O00423 815 aa6.95□□□□□ -1.3
HMGB3P9-201ENST00000441799 SOX11P35716 441 aa6.95□□□□□ -1.3
HMGB3P9-201ENST00000441799 EPHA4P54764 986 aa6.95□□□□□ -1.3
HMGB3P9-201ENST00000441799 SFSWAPQ12872 951 aaKnown RBP6.95□□□□□ -1.3
HMGB3P9-201ENST00000441799 TEAD4Q15561 434 aa6.95□□□□□ -1.3
HMGB3P9-201ENST00000441799 SLC30A3Q99726 388 aa6.95□□□□□ -1.3
HMGB3P9-201ENST00000441799 ZNF358Q9NW07 568 aa6.95□□□□□ -1.3
HMGB3P9-201ENST00000441799 ADARB2-AS1A8MUL3 147 aa6.94□□□□□ -1.3
HMGB3P9-201ENST00000441799 SIN3BO75182 1162 aa6.94□□□□□ -1.3
HMGB3P9-201ENST00000441799 UBTFP17480 764 aaKnown RBP6.94□□□□□ -1.3
HMGB3P9-201ENST00000441799 NOS2P35228 1153 aa6.94□□□□□ -1.3
HMGB3P9-201ENST00000441799 FGD1P98174 961 aa6.94□□□□□ -1.3
HMGB3P9-201ENST00000441799 ZMYM1Q5SVZ6 1142 aa6.94□□□□□ -1.3
HMGB3P9-201ENST00000441799 TPSG1Q9NRR2 321 aa6.94□□□□□ -1.3
HMGB3P9-201ENST00000441799 KRTAP9-6A0A140TA67 174 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 SUPT5HO00267 1087 aaKnown RBP6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 BACH1O14867 736 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 ALAS2P22557 587 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 GTF2IP78347 998 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 TBCELQ5QJ74 424 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 SH3PXD2AQ5TCZ1 1133 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 C8orf86Q6ZUL3 223 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 ALG2Q9H553 416 aa6.93□□□□□ -1.3
HMGB3P9-201ENST00000441799 FAM229AH3BQW9 127 aa6.92□□□□□ -1.3
HMGB3P9-201ENST00000441799 SKIP12755 728 aa6.92□□□□□ -1.3
HMGB3P9-201ENST00000441799 EML3Q32P44 896 aa6.92□□□□□ -1.3
HMGB3P9-201ENST00000441799 TNS4Q8IZW8 715 aa6.92□□□□□ -1.3
HMGB3P9-201ENST00000441799 NOD1Q9Y239 953 aa6.92□□□□□ -1.3
HMGB3P9-201ENST00000441799 M0R082 166 aa6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 ALBP02768 609 aa6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 SLC9A9Q8IVB4 645 aa6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 MICALL1Q8N3F8 863 aa6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 ZNF417Q8TAU3 575 aa6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 TNFRSF25Q93038 417 aa6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 ZNF587Q96SQ5 575 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 PRDM6Q9NQX0 595 aa6.91□□□□□ -1.3
HMGB3P9-201ENST00000441799 ZBTB7BO15156 539 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 NID1P14543 1247 aa6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 NCOA4Q13772 614 aa6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 MCM6Q14566 821 aa6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 PRRT3Q5FWE3 981 aa6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 C20orf204Q6ZNR8 217 aa6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 DHX37Q8IY37 1157 aaKnown RBP6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 ANP32EQ9BTT0 268 aa6.9□□□□□ -1.3
HMGB3P9-201ENST00000441799 SPDYE3A6NKU9 549 aa6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 DYRK3O43781 588 aa6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 LZTS3O60299 673 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 SPEM2Q0P670 501 aa6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 ZNF326Q5BKZ1 582 aaKnown RBP6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 DEPDC4Q8N2C3 294 aa6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 NFATC2IPQ8NCF5 419 aa6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 BCCIPQ9P287 314 aaKnown RBP eCLIP6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 ZNF232Q9UNY5 417 aa6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 COG6Q9Y2V7 657 aa6.89□□□□□ -1.31
HMGB3P9-201ENST00000441799 SERTM1A2A2V5 107 aa6.88□□□□□ -1.31
HMGB3P9-201ENST00000441799 APBA3O96018 575 aa6.88□□□□□ -1.31
HMGB3P9-201ENST00000441799 PSME1Q06323 249 aa6.88□□□□□ -1.31
HMGB3P9-201ENST00000441799 GRIK4Q16099 956 aa6.88□□□□□ -1.31
HMGB3P9-201ENST00000441799 RAB44Q7Z6P3 723 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P9-201ENST00000441799 KIAA1024Q9UPX6 916 aa6.88□□□□□ -1.31
HMGB3P9-201ENST00000441799 GPC6Q9Y625 555 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P9-201ENST00000441799 ADH7P40394 386 aa6.87□□□□□ -1.31
HMGB3P9-201ENST00000441799 TRIM28Q13263 835 aaKnown RBP6.87□□□□□ -1.31
HMGB3P9-201ENST00000441799 POTEAQ6S8J7 498 aa6.87□□□□□ -1.31
HMGB3P9-201ENST00000441799 NEUROD4Q9HD90 331 aa6.87□□□□□ -1.31
HMGB3P9-201ENST00000441799 HCN4Q9Y3Q4 1203 aa6.87□□□□□ -1.31
HMGB3P9-201ENST00000441799 KCNQ4P56696 695 aa6.86□□□□□ -1.31
HMGB3P9-201ENST00000441799 C1orf53Q5VUE5 145 aa6.86□□□□□ -1.31
HMGB3P9-201ENST00000441799 ZNF280CQ8ND82 737 aa6.86□□□□□ -1.31
HMGB3P9-201ENST00000441799 RHPN1Q8TCX5 695 aa6.86□□□□□ -1.31
HMGB3P9-201ENST00000441799 HSH2DQ96JZ2 352 aa6.86□□□□□ -1.31
HMGB3P9-201ENST00000441799 SFI1A8K8P3 1242 aa6.85□□□□□ -1.31
HMGB3P9-201ENST00000441799 USP17L5A8MUK1 530 aa6.85□□□□□ -1.31
HMGB3P9-201ENST00000441799 CLDN10P78369 228 aa6.85□□□□□ -1.31
HMGB3P9-201ENST00000441799 PUS7Q96PZ0 661 aaKnown RBP6.85□□□□□ -1.31
HMGB3P9-201ENST00000441799 TSPAN10Q9H1Z9 355 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P9-201ENST00000441799 BRD7Q9NPI1 651 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms