RNA–Protein interactions for RNA: ENST00000441237.1

PMS2P9-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 9, humanhuman

BASIC

Gene PMS2P9, Length 515 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P9-201ENST00000441237 BECN1Q14457 450 aa8.73□□□□□ -1.01
PMS2P9-201ENST00000441237 CFAP53Q96M91 514 aa8.73□□□□□ -1.01
PMS2P9-201ENST00000441237 STK32BQ9NY57 414 aa8.73□□□□□ -1.01
PMS2P9-201ENST00000441237 PLA2G2EQ9NZK7 142 aa8.73□□□□□ -1.01
PMS2P9-201ENST00000441237 PPP1R1BQ9UD71 204 aaPredicted RBP8.73□□□□□ -1.01
PMS2P9-201ENST00000441237 SHANK3Q9BYB0 1731 aa8.73□□□□□ -1.01
PMS2P9-201ENST00000441237 MAP3K19Q56UN5 1328 aa8.73□□□□□ -1.01
PMS2P9-201ENST00000441237 FRAT2O75474 233 aaPredicted RBP8.72□□□□□ -1.01
PMS2P9-201ENST00000441237 CT47B1P0C2W7 299 aaPredicted RBP8.72□□□□□ -1.01
PMS2P9-201ENST00000441237 CANXP27824 592 aaKnown RBP8.72□□□□□ -1.01
PMS2P9-201ENST00000441237 HOXC9P31274 260 aa8.72□□□□□ -1.01
PMS2P9-201ENST00000441237 AMPHP49418 695 aa8.72□□□□□ -1.01
PMS2P9-201ENST00000441237 SLC27A3Q5K4L6 730 aa8.72□□□□□ -1.01
PMS2P9-201ENST00000441237 KCNK17Q96T54 332 aa8.72□□□□□ -1.01
PMS2P9-201ENST00000441237 RWDD1Q9H446 243 aaPredicted RBP8.72□□□□□ -1.01
PMS2P9-201ENST00000441237 LY75O60449 1722 aa8.71□□□□□ -1.01
PMS2P9-201ENST00000441237 PKD1L3Q7Z443 1732 aa8.71□□□□□ -1.01
PMS2P9-201ENST00000441237 TXNRD1Q16881 649 aa8.71□□□□□ -1.02
PMS2P9-201ENST00000441237 PPP1R15BQ5SWA1 713 aa8.71□□□□□ -1.02
PMS2P9-201ENST00000441237 MYH16Q9H6N6 1097 aa8.71□□□□□ -1.02
PMS2P9-201ENST00000441237 PDZRN3Q9UPQ7 1066 aa8.71□□□□□ -1.02
PMS2P9-201ENST00000441237 PCDHB15Q9Y5E8 787 aa8.71□□□□□ -1.02
PMS2P9-201ENST00000441237 RLBP1P12271 317 aa8.7□□□□□ -1.02
PMS2P9-201ENST00000441237 MTHFSP49914 203 aa8.7□□□□□ -1.02
PMS2P9-201ENST00000441237 SLC15A2Q16348 729 aa8.7□□□□□ -1.02
PMS2P9-201ENST00000441237 MTFR1LQ9H019 292 aa8.7□□□□□ -1.02
PMS2P9-201ENST00000441237 ANO8Q9HCE9 1232 aaPredicted RBP8.7□□□□□ -1.02
PMS2P9-201ENST00000441237 PCDH11XQ9BZA7 1347 aa8.7□□□□□ -1.02
PMS2P9-201ENST00000441237 PCDH11YQ9BZA8 1340 aa8.7□□□□□ -1.02
PMS2P9-201ENST00000441237 MAP3K5Q99683 1374 aa8.7□□□□□ -1.02
PMS2P9-201ENST00000441237 NCAPD2Q15021 1401 aa8.7□□□□□ -1.02
PMS2P9-201ENST00000441237 MEGF6O75095 1541 aa8.7□□□□□ -1.02
PMS2P9-201ENST00000441237 COL24A1Q17RW2 1714 aa8.69□□□□□ -1.02
PMS2P9-201ENST00000441237 FYB1O15117 783 aa8.69□□□□□ -1.02
PMS2P9-201ENST00000441237 RAPGEF4Q8WZA2 1011 aa8.69□□□□□ -1.02
PMS2P9-201ENST00000441237 KCTD12Q96CX2 325 aaKnown RBP8.69□□□□□ -1.02
PMS2P9-201ENST00000441237 TBC1D32Q96NH3 1257 aa8.69□□□□□ -1.02
PMS2P9-201ENST00000441237 RGPD2P0DJD1 1756 aa8.68□□□□□ -1.02
PMS2P9-201ENST00000441237 MVPQ14764 893 aaKnown RBP8.68□□□□□ -1.02
PMS2P9-201ENST00000441237 NEUROD2Q15784 382 aa8.68□□□□□ -1.02
PMS2P9-201ENST00000441237 ZKSCAN2Q63HK3 967 aa8.68□□□□□ -1.02
PMS2P9-201ENST00000441237 ZNF454Q8N9F8 522 aa8.68□□□□□ -1.02
PMS2P9-201ENST00000441237 SLC16A10Q8TF71 515 aa8.68□□□□□ -1.02
PMS2P9-201ENST00000441237 ANTXR1Q9H6X2 564 aa8.68□□□□□ -1.02
PMS2P9-201ENST00000441237 RYDENQ9NUL5 291 aaKnown RBP8.68□□□□□ -1.02
PMS2P9-201ENST00000441237 BRPF3Q9ULD4 1205 aa8.68□□□□□ -1.02
PMS2P9-201ENST00000441237 TNNQ9UQP3 1299 aa8.68□□□□□ -1.02
PMS2P9-201ENST00000441237 VPS9D1Q9Y2B5 631 aa8.68□□□□□ -1.02
PMS2P9-201ENST00000441237 RRP7AQ9Y3A4 280 aaKnown RBP8.68□□□□□ -1.02
PMS2P9-201ENST00000441237 IL16Q14005 1332 aa8.68□□□□□ -1.02
PMS2P9-201ENST00000441237 GTPBP6O43824 516 aaPredicted RBP8.67□□□□□ -1.02
PMS2P9-201ENST00000441237 C5P01031 1676 aa8.67□□□□□ -1.02
PMS2P9-201ENST00000441237 COL3A1P02461 1466 aaPredicted RBP8.67□□□□□ -1.02
PMS2P9-201ENST00000441237 TATP17735 454 aaPredicted RBP8.67□□□□□ -1.02
PMS2P9-201ENST00000441237 FOSBP53539 338 aa8.67□□□□□ -1.02
PMS2P9-201ENST00000441237 ZCRB1Q8TBF4 217 aaKnown RBP8.67□□□□□ -1.02
PMS2P9-201ENST00000441237 UPF2Q9HAU5 1272 aaKnown RBP8.67□□□□□ -1.02
PMS2P9-201ENST00000441237 BCL2L12Q9HB09 334 aa8.67□□□□□ -1.02
PMS2P9-201ENST00000441237 TNNT2P45379 298 aaPredicted RBP8.66□□□□□ -1.02
PMS2P9-201ENST00000441237 HDAC1Q13547 482 aaPredicted RBP8.66□□□□□ -1.02
PMS2P9-201ENST00000441237 DZIP1LQ8IYY4 767 aaKnown RBP8.66□□□□□ -1.02
PMS2P9-201ENST00000441237 ACSBG1Q96GR2 724 aa8.66□□□□□ -1.02
PMS2P9-201ENST00000441237 PLEKHF1Q96S99 279 aa8.66□□□□□ -1.02
PMS2P9-201ENST00000441237 GGNBP2Q9H3C7 697 aa8.66□□□□□ -1.02
PMS2P9-201ENST00000441237 U2AF1L5P0DN76 240 aaPredicted RBP8.65□□□□□ -1.02
PMS2P9-201ENST00000441237 U2AF1Q01081 240 aaKnown RBP eCLIP8.65□□□□□ -1.02
PMS2P9-201ENST00000441237 RRS1Q15050 365 aaKnown RBP8.65□□□□□ -1.02
PMS2P9-201ENST00000441237 PTF1AQ7RTS3 328 aa8.65□□□□□ -1.02
PMS2P9-201ENST00000441237 FAM43AQ8N2R8 423 aa8.65□□□□□ -1.02
PMS2P9-201ENST00000441237 DDX54Q8TDD1 881 aaKnown RBP8.65□□□□□ -1.02
PMS2P9-201ENST00000441237 LTV1Q96GA3 475 aaPredicted RBP8.65□□□□□ -1.02
PMS2P9-201ENST00000441237 TBC1D2Q9BYX2 928 aa8.65□□□□□ -1.02
PMS2P9-201ENST00000441237 TUBGCP6Q96RT7 1819 aa8.65□□□□□ -1.02
PMS2P9-201ENST00000441237 TMPOP42166 694 aaKnown RBP8.64□□□□□ -1.03
PMS2P9-201ENST00000441237 L1TD1Q5T7N2 865 aaKnown RBP8.64□□□□□ -1.03
PMS2P9-201ENST00000441237 SLC4A5Q9BY07 1137 aa8.64□□□□□ -1.03
PMS2P9-201ENST00000441237 ZNF831Q5JPB2 1677 aa8.64□□□□□ -1.03
PMS2P9-201ENST00000441237 MAP2P11137 1827 aaKnown RBP8.64□□□□□ -1.03
PMS2P9-201ENST00000441237 TOGARAM1Q9Y4F4 1720 aa8.63□□□□□ -1.03
PMS2P9-201ENST00000441237 ZBTB7AO95365 584 aa8.63□□□□□ -1.03
PMS2P9-201ENST00000441237 POLD1P28340 1107 aa8.63□□□□□ -1.03
PMS2P9-201ENST00000441237 EXOSC9Q06265 439 aaKnown RBP8.63□□□□□ -1.03
PMS2P9-201ENST00000441237 NBPF6Q5VWK0 638 aa8.63□□□□□ -1.03
PMS2P9-201ENST00000441237 SMC5Q8IY18 1101 aa8.63□□□□□ -1.03
PMS2P9-201ENST00000441237 FLAD1Q8NFF5 587 aa8.63□□□□□ -1.03
PMS2P9-201ENST00000441237 SMARCC1Q92922 1105 aaPredicted RBP8.63□□□□□ -1.03
PMS2P9-201ENST00000441237 SYTL4Q96C24 671 aaPredicted RBP8.63□□□□□ -1.03
PMS2P9-201ENST00000441237 NBPF4Q96M43 638 aa8.63□□□□□ -1.03
PMS2P9-201ENST00000441237 PNNQ9H307 717 aaKnown RBP8.63□□□□□ -1.03
PMS2P9-201ENST00000441237 DDX19BQ9UMR2 479 aa8.63□□□□□ -1.03
PMS2P9-201ENST00000441237 SPG7Q9UQ90 795 aa8.63□□□□□ -1.03
PMS2P9-201ENST00000441237 TAF1LQ8IZX4 1826 aa8.63□□□□□ -1.03
PMS2P9-201ENST00000441237 ITGB4P16144 1822 aa8.62□□□□□ -1.03
PMS2P9-201ENST00000441237 BHMG1C9JSJ3 638 aaPredicted RBP8.62□□□□□ -1.03
PMS2P9-201ENST00000441237 EVI5O60447 810 aa8.62□□□□□ -1.03
PMS2P9-201ENST00000441237 YY1P25490 414 aa8.62□□□□□ -1.03
PMS2P9-201ENST00000441237 PRIM1P49642 420 aaKnown RBP8.62□□□□□ -1.03
PMS2P9-201ENST00000441237 ALDH1L2Q3SY69 923 aa8.62□□□□□ -1.03
PMS2P9-201ENST00000441237 HSP90AB2PQ58FF8 381 aa8.62□□□□□ -1.03
PMS2P9-201ENST00000441237 ATF7IPQ6VMQ6 1270 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms