RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 PKP1Q13835 747 aa22.88■■□□□ 1.25
LRCH3-207ENST00000441090 CABLES1Q8TDN4 633 aa22.88■■□□□ 1.25
LRCH3-207ENST00000441090 PARP4Q9UKK3 1724 aaKnown RBP22.87■■□□□ 1.25
LRCH3-207ENST00000441090 MRE11P49959 708 aa22.87■■□□□ 1.25
LRCH3-207ENST00000441090 KAZALD1Q96I82 304 aa22.87■■□□□ 1.25
LRCH3-207ENST00000441090 SUCLG2Q96I99 432 aa22.87■■□□□ 1.25
LRCH3-207ENST00000441090 SPATA31A3Q5VYP0 1347 aa22.87■■□□□ 1.25
LRCH3-207ENST00000441090 CPDO75976 1380 aa22.86■■□□□ 1.25
LRCH3-207ENST00000441090 CUL4AQ13619 759 aa22.86■■□□□ 1.25
LRCH3-207ENST00000441090 LARP1Q6PKG0 1096 aaKnown RBP22.86■■□□□ 1.25
LRCH3-207ENST00000441090 DCAF5Q96JK2 942 aa22.86■■□□□ 1.25
LRCH3-207ENST00000441090 ARXQ96QS3 562 aa22.86■■□□□ 1.25
LRCH3-207ENST00000441090 RAD50Q92878 1312 aa22.86■■□□□ 1.25
LRCH3-207ENST00000441090 IGKV5-2P06315 115 aa22.86■■□□□ 1.25
LRCH3-207ENST00000441090 RIC3Q7Z5B4 369 aa22.86■■□□□ 1.25
LRCH3-207ENST00000441090 PA2G4Q9UQ80 394 aaKnown RBP22.86■■□□□ 1.25
LRCH3-207ENST00000441090 CHRNA2Q15822 529 aa22.85■■□□□ 1.25
LRCH3-207ENST00000441090 ZNF496Q96IT1 587 aaPredicted RBP22.85■■□□□ 1.25
LRCH3-207ENST00000441090 BICC1Q9H694 974 aaKnown RBP22.85■■□□□ 1.25
LRCH3-207ENST00000441090 LAMB4A4D0S4 1761 aa22.85■■□□□ 1.25
LRCH3-207ENST00000441090 AFDNP55196 1824 aaKnown RBP22.85■■□□□ 1.25
LRCH3-207ENST00000441090 CYP27B1O15528 508 aa22.84■■□□□ 1.25
LRCH3-207ENST00000441090 KLHL40Q2TBA0 621 aa22.84■■□□□ 1.25
LRCH3-207ENST00000441090 ECHDC1Q9NTX5 307 aa22.84■■□□□ 1.25
LRCH3-207ENST00000441090 ZDHHC9Q9Y397 364 aa22.84■■□□□ 1.25
LRCH3-207ENST00000441090 GPATCH3Q96I76 525 aa22.84■■□□□ 1.25
LRCH3-207ENST00000441090 MYL6BP14649 208 aa22.83■■□□□ 1.25
LRCH3-207ENST00000441090 MCTP1Q6DN14 999 aa22.83■■□□□ 1.25
LRCH3-207ENST00000441090 INTS4Q96HW7 963 aaKnown RBP22.83■■□□□ 1.25
LRCH3-207ENST00000441090 LSG1Q9H089 658 aaKnown RBP22.83■■□□□ 1.25
LRCH3-207ENST00000441090 GRPEL1Q9HAV7 217 aa22.83■■□□□ 1.25
LRCH3-207ENST00000441090 NEXNQ0ZGT2 675 aa22.82■■□□□ 1.24
LRCH3-207ENST00000441090 XAGE3Q8WTP9 111 aa22.82■■□□□ 1.24
LRCH3-207ENST00000441090 ARFGEF2Q9Y6D5 1785 aa22.82■■□□□ 1.24
LRCH3-207ENST00000441090 GLI3P10071 1580 aa22.82■■□□□ 1.24
LRCH3-207ENST00000441090 NEURL1BA8MQ27 555 aa22.82■■□□□ 1.24
LRCH3-207ENST00000441090 SNRPA1P09661 255 aaKnown RBP22.82■■□□□ 1.24
LRCH3-207ENST00000441090 IFIT2P09913 472 aaKnown RBP22.82■■□□□ 1.24
LRCH3-207ENST00000441090 LRP10Q7Z4F1 713 aa22.82■■□□□ 1.24
LRCH3-207ENST00000441090 TTC5Q8N0Z6 440 aa22.82■■□□□ 1.24
LRCH3-207ENST00000441090 COPS6Q7L5N1 327 aa22.81■■□□□ 1.24
LRCH3-207ENST00000441090 METTL22Q9BUU2 404 aaPredicted RBP22.81■■□□□ 1.24
LRCH3-207ENST00000441090 DDX49Q9Y6V7 483 aaKnown RBP22.81■■□□□ 1.24
LRCH3-207ENST00000441090 PANK2Q9BZ23 570 aa22.81■■□□□ 1.24
LRCH3-207ENST00000441090 UPF3BQ9BZI7 483 aaKnown RBP22.81■■□□□ 1.24
LRCH3-207ENST00000441090 SASH1O94885 1247 aa22.8■■□□□ 1.24
LRCH3-207ENST00000441090 GCKRQ14397 625 aa22.8■■□□□ 1.24
LRCH3-207ENST00000441090 LMBRD1Q9NUN5 540 aa22.8■■□□□ 1.24
LRCH3-207ENST00000441090 G3BP1Q13283 466 aaKnown RBP eCLIP22.79■■□□□ 1.24
LRCH3-207ENST00000441090 CWC27Q6UX04 472 aaKnown RBP22.79■■□□□ 1.24
LRCH3-207ENST00000441090 AACSQ86V21 672 aa22.79■■□□□ 1.24
LRCH3-207ENST00000441090 FMNL2Q96PY5 1086 aa22.79■■□□□ 1.24
LRCH3-207ENST00000441090 USP16Q9Y5T5 823 aa22.79■■□□□ 1.24
LRCH3-207ENST00000441090 KIAA1211Q6ZU35 1233 aa22.79■■□□□ 1.24
LRCH3-207ENST00000441090 FAM43AQ8N2R8 423 aa22.79■■□□□ 1.24
LRCH3-207ENST00000441090 RUFY2Q8WXA3 655 aa22.79■■□□□ 1.24
LRCH3-207ENST00000441090 GAS2L3Q86XJ1 694 aa22.78■■□□□ 1.24
LRCH3-207ENST00000441090 MYD88Q99836 296 aa22.78■■□□□ 1.24
LRCH3-207ENST00000441090 DIAPH3Q9NSV4 1193 aa22.78■■□□□ 1.24
LRCH3-207ENST00000441090 SNX14Q9Y5W7 946 aa22.78■■□□□ 1.24
LRCH3-207ENST00000441090 ANKRD13DQ6ZTN6 518 aa22.77■■□□□ 1.24
LRCH3-207ENST00000441090 EVI5LQ96CN4 794 aa22.77■■□□□ 1.24
LRCH3-207ENST00000441090 NOL8Q76FK4 1167 aaKnown RBP22.76■■□□□ 1.23
LRCH3-207ENST00000441090 EAF2Q96CJ1 260 aaPredicted RBP22.76■■□□□ 1.23
LRCH3-207ENST00000441090 BRD1O95696 1058 aa22.75■■□□□ 1.23
LRCH3-207ENST00000441090 CABP4P57796 275 aa22.75■■□□□ 1.23
LRCH3-207ENST00000441090 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.75■■□□□ 1.23
LRCH3-207ENST00000441090 UBR2Q8IWV8 1755 aa22.75■■□□□ 1.23
LRCH3-207ENST00000441090 BRINP3Q76B58 766 aa22.75■■□□□ 1.23
LRCH3-207ENST00000441090 TTC14Q96N46 770 aa22.74■■□□□ 1.23
LRCH3-207ENST00000441090 COL15A1P39059 1388 aa22.74■■□□□ 1.23
LRCH3-207ENST00000441090 HSPA2P54652 639 aa22.74■■□□□ 1.23
LRCH3-207ENST00000441090 EPHA10Q5JZY3 1008 aa22.74■■□□□ 1.23
LRCH3-207ENST00000441090 RASEFQ8IZ41 740 aa22.74■■□□□ 1.23
LRCH3-207ENST00000441090 CCDC8Q9H0W5 538 aaPredicted RBP22.72■■□□□ 1.23
LRCH3-207ENST00000441090 SIL1Q9H173 461 aa22.72■■□□□ 1.23
LRCH3-207ENST00000441090 WDR17Q8IZU2 1322 aa22.72■■□□□ 1.23
LRCH3-207ENST00000441090 PIP4K2AP48426 406 aaPredicted RBP22.72■■□□□ 1.23
LRCH3-207ENST00000441090 ABCA3Q99758 1704 aa22.72■■□□□ 1.23
LRCH3-207ENST00000441090 HIP1O00291 1037 aa22.71■■□□□ 1.23
LRCH3-207ENST00000441090 PRPF40AO75400 957 aaKnown RBP22.71■■□□□ 1.23
LRCH3-207ENST00000441090 COPRSQ9NQ92 184 aa22.71■■□□□ 1.23
LRCH3-207ENST00000441090 PAPPAQ13219 1627 aa22.71■■□□□ 1.23
LRCH3-207ENST00000441090 KLHDC4Q8TBB5 520 aa22.7■■□□□ 1.23
LRCH3-207ENST00000441090 TLR7Q9NYK1 1049 aaKnown RBP22.7■■□□□ 1.23
LRCH3-207ENST00000441090 PCDH11XQ9BZA7 1347 aa22.7■■□□□ 1.22
LRCH3-207ENST00000441090 PCDH11YQ9BZA8 1340 aa22.7■■□□□ 1.22
LRCH3-207ENST00000441090 NUP188Q5SRE5 1749 aa22.7■■□□□ 1.22
LRCH3-207ENST00000441090 ZNF445P59923 1031 aa22.7■■□□□ 1.22
LRCH3-207ENST00000441090 PTH1RQ03431 593 aa22.7■■□□□ 1.22
LRCH3-207ENST00000441090 KCNB2Q92953 911 aa22.7■■□□□ 1.22
LRCH3-207ENST00000441090 SHANK3Q9BYB0 1731 aa22.7■■□□□ 1.22
LRCH3-207ENST00000441090 ERBB4Q15303 1308 aa22.7■■□□□ 1.22
LRCH3-207ENST00000441090 RABL6Q3YEC7 729 aaPredicted RBP22.69■■□□□ 1.22
LRCH3-207ENST00000441090 PRDM11Q9NQV5 511 aa22.69■■□□□ 1.22
LRCH3-207ENST00000441090 COL5A2P05997 1499 aaPredicted RBP22.69■■□□□ 1.22
LRCH3-207ENST00000441090 STRCQ7RTU9 1775 aa22.69■■□□□ 1.22
LRCH3-207ENST00000441090 RFX5P48382 616 aaPredicted RBP22.69■■□□□ 1.22
LRCH3-207ENST00000441090 AK2P54819 239 aa22.69■■□□□ 1.22
LRCH3-207ENST00000441090 CAVIN1Q6NZI2 390 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms