RNA–Protein interactions for RNA: ENST00000440702.5

FAM20B-202, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

TSL 3

Gene FAM20B, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-202ENST00000440702 ST5P78524 1137 aa22.84■■□□□ 1.25
FAM20B-202ENST00000440702 SMC1BQ8NDV3 1235 aa22.84■■□□□ 1.25
FAM20B-202ENST00000440702 PDZRN3Q9UPQ7 1066 aa22.82■■□□□ 1.24
FAM20B-202ENST00000440702 ARFGEF2Q9Y6D5 1785 aa22.81■■□□□ 1.24
FAM20B-202ENST00000440702 SNRPA1P09661 255 aaKnown RBP22.81■■□□□ 1.24
FAM20B-202ENST00000440702 VEGFAP15692 232 aaPredicted RBP22.81■■□□□ 1.24
FAM20B-202ENST00000440702 KLRG1Q96E93 195 aa22.81■■□□□ 1.24
FAM20B-202ENST00000440702 DLG5Q8TDM6 1919 aa22.8■■□□□ 1.24
FAM20B-202ENST00000440702 NBPF5PQ86XG9 351 aaPredicted RBP22.8■■□□□ 1.24
FAM20B-202ENST00000440702 ERFEQ4G0M1 354 aa22.79■■□□□ 1.24
FAM20B-202ENST00000440702 PRPF40BQ6NWY9 871 aaKnown RBP22.79■■□□□ 1.24
FAM20B-202ENST00000440702 FAM177BA6PVY3 158 aa22.78■■□□□ 1.24
FAM20B-202ENST00000440702 SRGNP10124 158 aa22.78■■□□□ 1.24
FAM20B-202ENST00000440702 STYK1Q6J9G0 422 aa22.78■■□□□ 1.24
FAM20B-202ENST00000440702 CNKSR1Q969H4 720 aa22.78■■□□□ 1.24
FAM20B-202ENST00000440702 TAOK3Q9H2K8 898 aa22.78■■□□□ 1.24
FAM20B-202ENST00000440702 MIS18AQ9NYP9 233 aa22.78■■□□□ 1.24
FAM20B-202ENST00000440702 LAMB4A4D0S4 1761 aa22.78■■□□□ 1.24
FAM20B-202ENST00000440702 NBPF26B4DH59 902 aa22.77■■□□□ 1.24
FAM20B-202ENST00000440702 NBPF10Q6P3W6 841 aaKnown RBP22.77■■□□□ 1.24
FAM20B-202ENST00000440702 NBPF15Q8N660 670 aa22.77■■□□□ 1.24
FAM20B-202ENST00000440702 MASTLQ96GX5 879 aa22.77■■□□□ 1.24
FAM20B-202ENST00000440702 ZNF652Q9Y2D9 606 aa22.77■■□□□ 1.24
FAM20B-202ENST00000440702 DPY19L2Q6NUT2 758 aa22.76■■□□□ 1.23
FAM20B-202ENST00000440702 NIP7Q9Y221 180 aaKnown RBP eCLIP22.75■■□□□ 1.23
FAM20B-202ENST00000440702 POTECB2RU33 542 aa22.74■■□□□ 1.23
FAM20B-202ENST00000440702 TAF7Q15545 349 aaPredicted RBP22.74■■□□□ 1.23
FAM20B-202ENST00000440702 CLEC4GQ6UXB4 293 aa22.74■■□□□ 1.23
FAM20B-202ENST00000440702 LTBP3Q9NS15 1303 aa22.74■■□□□ 1.23
FAM20B-202ENST00000440702 KDM3BQ7LBC6 1761 aa22.73■■□□□ 1.23
FAM20B-202ENST00000440702 HTATSF1O43719 755 aaKnown RBP22.73■■□□□ 1.23
FAM20B-202ENST00000440702 NGEFQ8N5V2 710 aa22.73■■□□□ 1.23
FAM20B-202ENST00000440702 NEFMP07197 916 aa22.72■■□□□ 1.23
FAM20B-202ENST00000440702 JMYQ8N9B5 988 aa22.72■■□□□ 1.23
FAM20B-202ENST00000440702 DDNO94850 711 aaPredicted RBP22.71■■□□□ 1.23
FAM20B-202ENST00000440702 HLFQ16534 295 aa22.71■■□□□ 1.23
FAM20B-202ENST00000440702 SOGA3Q5TF21 947 aa22.71■■□□□ 1.23
FAM20B-202ENST00000440702 NPR1P16066 1061 aa22.7■■□□□ 1.22
FAM20B-202ENST00000440702 THUMPD2Q9BTF0 503 aaKnown RBP22.7■■□□□ 1.22
FAM20B-202ENST00000440702 NUP98P52948 1817 aa22.69■■□□□ 1.22
FAM20B-202ENST00000440702 CCDC93Q567U6 631 aa22.69■■□□□ 1.22
FAM20B-202ENST00000440702 OLFM4Q6UX06 510 aa22.69■■□□□ 1.22
FAM20B-202ENST00000440702 TPTE2Q6XPS3 522 aa22.69■■□□□ 1.22
FAM20B-202ENST00000440702 POTEIP0CG38 1075 aa22.67■■□□□ 1.22
FAM20B-202ENST00000440702 POTEJP0CG39 1038 aa22.67■■□□□ 1.22
FAM20B-202ENST00000440702 GTF2E1P29083 439 aaPredicted RBP22.67■■□□□ 1.22
FAM20B-202ENST00000440702 C7orf43Q8WVR3 580 aa22.67■■□□□ 1.22
FAM20B-202ENST00000440702 ZNF277Q9NRM2 450 aaPredicted RBP22.67■■□□□ 1.22
FAM20B-202ENST00000440702 RRP7AQ9Y3A4 280 aaKnown RBP22.66■■□□□ 1.22
FAM20B-202ENST00000440702 PCNTO95613 3336 aa22.66■■□□□ 1.22
FAM20B-202ENST00000440702 ABCC12Q96J65 1359 aa22.65■■□□□ 1.22
FAM20B-202ENST00000440702 MYL6BP14649 208 aa22.65■■□□□ 1.22
FAM20B-202ENST00000440702 NFE2L2Q16236 605 aa22.65■■□□□ 1.22
FAM20B-202ENST00000440702 PNISRQ8TF01 805 aaKnown RBP22.65■■□□□ 1.22
FAM20B-202ENST00000440702 PLEKHF1Q96S99 279 aa22.65■■□□□ 1.22
FAM20B-202ENST00000440702 FKBP4Q02790 459 aaKnown RBP eCLIP22.64■■□□□ 1.21
FAM20B-202ENST00000440702 COL13A1Q5TAT6 717 aaPredicted RBP22.64■■□□□ 1.21
FAM20B-202ENST00000440702 CHADLQ6NUI6 762 aa22.64■■□□□ 1.21
FAM20B-202ENST00000440702 NUTM1Q86Y26 1132 aa22.64■■□□□ 1.21
FAM20B-202ENST00000440702 ZNF541Q9H0D2 1346 aa22.63■■□□□ 1.21
FAM20B-202ENST00000440702 MAPK8IP3Q9UPT6 1336 aa22.63■■□□□ 1.21
FAM20B-202ENST00000440702 KLRG2A4D1S0 409 aaPredicted RBP22.63■■□□□ 1.21
FAM20B-202ENST00000440702 RGL2O15211 777 aa22.63■■□□□ 1.21
FAM20B-202ENST00000440702 EIF4A1P60842 406 aaKnown RBP22.63■■□□□ 1.21
FAM20B-202ENST00000440702 KIF6Q6ZMV9 814 aa22.63■■□□□ 1.21
FAM20B-202ENST00000440702 TTLL7Q6ZT98 887 aa22.63■■□□□ 1.21
FAM20B-202ENST00000440702 MAP3K15Q6ZN16 1313 aa22.62■■□□□ 1.21
FAM20B-202ENST00000440702 SCN4AP35499 1836 aa22.62■■□□□ 1.21
FAM20B-202ENST00000440702 GPTP24298 496 aa22.62■■□□□ 1.21
FAM20B-202ENST00000440702 ZBTB3Q9H5J0 574 aa22.62■■□□□ 1.21
FAM20B-202ENST00000440702 HSPA1AP0DMV8 641 aaKnown RBP22.6■■□□□ 1.21
FAM20B-202ENST00000440702 HSPA1BP0DMV9 641 aaKnown RBP22.6■■□□□ 1.21
FAM20B-202ENST00000440702 RTKN2Q8IZC4 609 aa22.6■■□□□ 1.21
FAM20B-202ENST00000440702 NYXQ9GZU5 481 aa22.6■■□□□ 1.21
FAM20B-202ENST00000440702 IQCA1LA6NCM1 817 aa22.59■■□□□ 1.21
FAM20B-202ENST00000440702 ERVV-1B6SEH8 477 aa22.59■■□□□ 1.21
FAM20B-202ENST00000440702 ALDH1B1P30837 517 aa22.59■■□□□ 1.21
FAM20B-202ENST00000440702 SYNE4Q8N205 404 aa22.59■■□□□ 1.21
FAM20B-202ENST00000440702 UBN2Q6ZU65 1347 aa22.58■■□□□ 1.21
FAM20B-202ENST00000440702 EAPPQ56P03 285 aaPredicted RBP22.58■■□□□ 1.21
FAM20B-202ENST00000440702 L3MBTL3Q96JM7 780 aaPredicted RBP22.58■■□□□ 1.21
FAM20B-202ENST00000440702 TAF1DQ9H5J8 278 aaPredicted RBP22.58■■□□□ 1.21
FAM20B-202ENST00000440702 MKRN1Q9UHC7 482 aaKnown RBP22.58■■□□□ 1.21
FAM20B-202ENST00000440702 IARSP41252 1262 aaKnown RBP22.57■■□□□ 1.2
FAM20B-202ENST00000440702 RPGRQ92834 1020 aaKnown RBP22.57■■□□□ 1.2
FAM20B-202ENST00000440702 TSPYL4Q9UJ04 414 aa22.57■■□□□ 1.2
FAM20B-202ENST00000440702 CAPN15O75808 1086 aa22.56■■□□□ 1.2
FAM20B-202ENST00000440702 SLC51AQ86UW1 340 aa22.56■■□□□ 1.2
FAM20B-202ENST00000440702 LDHDQ86WU2 507 aa22.56■■□□□ 1.2
FAM20B-202ENST00000440702 PNNQ9H307 717 aaKnown RBP22.56■■□□□ 1.2
FAM20B-202ENST00000440702 CREBZFQ9NS37 354 aa22.56■■□□□ 1.2
FAM20B-202ENST00000440702 CRY2Q49AN0 593 aa22.55■■□□□ 1.2
FAM20B-202ENST00000440702 SUSD4Q5VX71 490 aa22.55■■□□□ 1.2
FAM20B-202ENST00000440702 TCERG1O14776 1098 aaKnown RBP22.54■■□□□ 1.2
FAM20B-202ENST00000440702 EIF2S2P20042 333 aaKnown RBP22.54■■□□□ 1.2
FAM20B-202ENST00000440702 TNS4Q8IZW8 715 aa22.54■■□□□ 1.2
FAM20B-202ENST00000440702 HACL1Q9UJ83 578 aa22.54■■□□□ 1.2
FAM20B-202ENST00000440702 CLEC11AQ9Y240 323 aa22.54■■□□□ 1.2
FAM20B-202ENST00000440702 RNF123Q5XPI4 1314 aa22.54■■□□□ 1.2
FAM20B-202ENST00000440702 COL4A5P29400 1685 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms