RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 HOMEZQ8IX15 550 aa9.65□□□□□ -0.86
APP-209ENST00000440126 ZGPATQ8N5A5 531 aaKnown RBP9.65□□□□□ -0.86
APP-209ENST00000440126 CCDC8Q9H0W5 538 aaPredicted RBP9.65□□□□□ -0.86
APP-209ENST00000440126 BABAM1Q9NWV8 329 aa9.65□□□□□ -0.86
APP-209ENST00000440126 CHMP5Q9NZZ3 219 aa9.65□□□□□ -0.86
APP-209ENST00000440126 NDUFB9Q9Y6M9 179 aa9.65□□□□□ -0.86
APP-209ENST00000440126 ALS2Q96Q42 1657 aa9.65□□□□□ -0.87
APP-209ENST00000440126 K7ELQ4 463 aaPredicted RBP9.64□□□□□ -0.87
APP-209ENST00000440126 CASC1Q6TDU7 716 aa9.64□□□□□ -0.87
APP-209ENST00000440126 KAZALD1Q96I82 304 aa9.64□□□□□ -0.87
APP-209ENST00000440126 SALL3Q9BXA9 1300 aa9.64□□□□□ -0.87
APP-209ENST00000440126 ERC2O15083 957 aa9.64□□□□□ -0.87
APP-209ENST00000440126 TLR7Q9NYK1 1049 aaKnown RBP9.64□□□□□ -0.87
APP-209ENST00000440126 CACNA1FO60840 1977 aa9.64□□□□□ -0.87
APP-209ENST00000440126 MCM4P33991 863 aa9.64□□□□□ -0.87
APP-209ENST00000440126 FOXD4L6Q3SYB3 417 aaPredicted RBP9.64□□□□□ -0.87
APP-209ENST00000440126 TPRNQ4KMQ1 711 aa9.64□□□□□ -0.87
APP-209ENST00000440126 FOXD4L3Q6VB84 417 aaPredicted RBP9.64□□□□□ -0.87
APP-209ENST00000440126 TNPO1Q92973 898 aaKnown RBP9.64□□□□□ -0.87
APP-209ENST00000440126 DDX21Q9NR30 783 aaKnown RBP eCLIP9.64□□□□□ -0.87
APP-209ENST00000440126 A1BGP04217 495 aa9.63□□□□□ -0.87
APP-209ENST00000440126 CHMLP26374 656 aa9.63□□□□□ -0.87
APP-209ENST00000440126 EVA1CP58658 441 aa9.63□□□□□ -0.87
APP-209ENST00000440126 CWC27Q6UX04 472 aaKnown RBP9.63□□□□□ -0.87
APP-209ENST00000440126 ESYT1Q9BSJ8 1104 aa9.63□□□□□ -0.87
APP-209ENST00000440126 GRM8O00222 908 aa9.63□□□□□ -0.87
APP-209ENST00000440126 CPA1P15085 419 aa9.63□□□□□ -0.87
APP-209ENST00000440126 NEK4P51957 841 aa9.63□□□□□ -0.87
APP-209ENST00000440126 POLA2Q14181 598 aa9.63□□□□□ -0.87
APP-209ENST00000440126 UBE3BQ7Z3V4 1068 aa9.63□□□□□ -0.87
APP-209ENST00000440126 CCDC85AQ96PX6 553 aaPredicted RBP9.63□□□□□ -0.87
APP-209ENST00000440126 CHMP3Q9Y3E7 222 aa9.63□□□□□ -0.87
APP-209ENST00000440126 KIF1AQ12756 1690 aa9.62□□□□□ -0.87
APP-209ENST00000440126 CHGBP05060 677 aa9.62□□□□□ -0.87
APP-209ENST00000440126 HOXB7P09629 217 aa9.62□□□□□ -0.87
APP-209ENST00000440126 AACSQ86V21 672 aa9.62□□□□□ -0.87
APP-209ENST00000440126 EDC3Q96F86 508 aaKnown RBP9.62□□□□□ -0.87
APP-209ENST00000440126 ZBTB3Q9H5J0 574 aa9.62□□□□□ -0.87
APP-209ENST00000440126 C5P01031 1676 aa9.62□□□□□ -0.87
APP-209ENST00000440126 TTLL7Q6ZT98 887 aa9.62□□□□□ -0.87
APP-209ENST00000440126 CNPY4Q8N129 248 aa9.62□□□□□ -0.87
APP-209ENST00000440126 SNX21Q969T3 373 aa9.62□□□□□ -0.87
APP-209ENST00000440126 HYPKQ9NX55 129 aa9.62□□□□□ -0.87
APP-209ENST00000440126 PHRF1Q9P1Y6 1649 aaKnown RBP9.61□□□□□ -0.87
APP-209ENST00000440126 XIRP1Q702N8 1843 aaKnown RBP9.61□□□□□ -0.87
APP-209ENST00000440126 PI4K2BQ8TCG2 481 aa9.61□□□□□ -0.87
APP-209ENST00000440126 KIF1BPQ96EK5 621 aa9.61□□□□□ -0.87
APP-209ENST00000440126 CAMTA1Q9Y6Y1 1673 aa9.61□□□□□ -0.87
APP-209ENST00000440126 REC8O95072 547 aa9.61□□□□□ -0.87
APP-209ENST00000440126 ZCRB1Q8TBF4 217 aaKnown RBP9.61□□□□□ -0.87
APP-209ENST00000440126 DCAF5Q96JK2 942 aa9.61□□□□□ -0.87
APP-209ENST00000440126 OSBPL3Q9H4L5 887 aa9.61□□□□□ -0.87
APP-209ENST00000440126 NCAPD2Q15021 1401 aa9.61□□□□□ -0.87
APP-209ENST00000440126 NEURL1BA8MQ27 555 aa9.6□□□□□ -0.87
APP-209ENST00000440126 NBPF26B4DH59 902 aa9.6□□□□□ -0.87
APP-209ENST00000440126 NBPF14Q5TI25 921 aa9.6□□□□□ -0.87
APP-209ENST00000440126 NBPF10Q6P3W6 841 aaKnown RBP9.6□□□□□ -0.87
APP-209ENST00000440126 ANKRD13DQ6ZTN6 518 aa9.6□□□□□ -0.87
APP-209ENST00000440126 NBPF15Q8N660 670 aa9.6□□□□□ -0.87
APP-209ENST00000440126 LINS1Q8NG48 757 aa9.6□□□□□ -0.87
APP-209ENST00000440126 PRDM10Q9NQV6 1147 aa9.6□□□□□ -0.87
APP-209ENST00000440126 HEG1Q9ULI3 1381 aa9.6□□□□□ -0.87
APP-209ENST00000440126 SASH1O94885 1247 aa9.6□□□□□ -0.87
APP-209ENST00000440126 DDX58O95786 925 aaKnown RBP9.6□□□□□ -0.87
APP-209ENST00000440126 SNRPA1P09661 255 aaKnown RBP9.6□□□□□ -0.87
APP-209ENST00000440126 RABEP1Q15276 862 aa9.6□□□□□ -0.87
APP-209ENST00000440126 SYTL4Q96C24 671 aaPredicted RBP9.6□□□□□ -0.87
APP-209ENST00000440126 EAF2Q96CJ1 260 aaPredicted RBP9.6□□□□□ -0.87
APP-209ENST00000440126 FMNL2Q96PY5 1086 aa9.6□□□□□ -0.87
APP-209ENST00000440126 BOLA2Q9H3K6 86 aa9.6□□□□□ -0.87
APP-209ENST00000440126 KCNG1Q9UIX4 513 aa9.6□□□□□ -0.87
APP-209ENST00000440126 COL18A1P39060 1754 aa9.6□□□□□ -0.87
APP-209ENST00000440126 TRAK2O60296 914 aa9.6□□□□□ -0.87
APP-209ENST00000440126 IFIT2P09913 472 aaKnown RBP9.6□□□□□ -0.87
APP-209ENST00000440126 NEXNQ0ZGT2 675 aa9.6□□□□□ -0.87
APP-209ENST00000440126 PXDNLA1KZ92 1463 aa9.59□□□□□ -0.87
APP-209ENST00000440126 DDIT3P35638 169 aa9.59□□□□□ -0.87
APP-209ENST00000440126 COL9A3Q14050 684 aaPredicted RBP9.59□□□□□ -0.87
APP-209ENST00000440126 GCKRQ14397 625 aa9.59□□□□□ -0.87
APP-209ENST00000440126 CLASRPQ8N2M8 674 aaKnown RBP9.59□□□□□ -0.87
APP-209ENST00000440126 BTG4Q9NY30 223 aa9.59□□□□□ -0.87
APP-209ENST00000440126 LMTK3Q96Q04 1460 aa9.59□□□□□ -0.87
APP-209ENST00000440126 WDR17Q8IZU2 1322 aa9.59□□□□□ -0.87
APP-209ENST00000440126 A0A087WZG4 1122 aa9.59□□□□□ -0.87
APP-209ENST00000440126 TPM2P07951 284 aa9.59□□□□□ -0.87
APP-209ENST00000440126 SCN11AQ9UI33 1791 aa9.58□□□□□ -0.88
APP-209ENST00000440126 ALDH1L1O75891 902 aa9.58□□□□□ -0.88
APP-209ENST00000440126 G3BP1Q13283 466 aaKnown RBP eCLIP9.58□□□□□ -0.88
APP-209ENST00000440126 SLFNL1Q499Z3 407 aa9.58□□□□□ -0.88
APP-209ENST00000440126 STAP2Q9UGK3 403 aa9.58□□□□□ -0.88
APP-209ENST00000440126 SIPA1L3O60292 1781 aaPredicted RBP9.58□□□□□ -0.88
APP-209ENST00000440126 STRCQ7RTU9 1775 aa9.58□□□□□ -0.88
APP-209ENST00000440126 NCOA3Q9Y6Q9 1424 aa9.58□□□□□ -0.88
APP-209ENST00000440126 ADAMTS2O95450 1211 aa9.58□□□□□ -0.88
APP-209ENST00000440126 LRP10Q7Z4F1 713 aa9.58□□□□□ -0.88
APP-209ENST00000440126 RASEFQ8IZ41 740 aa9.58□□□□□ -0.88
APP-209ENST00000440126 FAM227BQ96M60 508 aa9.58□□□□□ -0.88
APP-209ENST00000440126 ASAP1Q9ULH1 1129 aa9.58□□□□□ -0.88
APP-209ENST00000440126 RAB11FIP3O75154 756 aa9.57□□□□□ -0.88
APP-209ENST00000440126 IL2RBP14784 551 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms