RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 SNRPA1P09661 255 aaKnown RBP15.21■□□□□ 0.03
IRF1-204ENST00000439555 ERFEQ4G0M1 354 aa15.21■□□□□ 0.03
IRF1-204ENST00000439555 NPM2Q86SE8 214 aaKnown RBP15.21■□□□□ 0.03
IRF1-204ENST00000439555 MKRN1Q9UHC7 482 aaKnown RBP15.21■□□□□ 0.03
IRF1-204ENST00000439555 UBR2Q8IWV8 1755 aa15.21■□□□□ 0.02
IRF1-204ENST00000439555 PASKQ96RG2 1323 aa15.2■□□□□ 0.02
IRF1-204ENST00000439555 PNISRQ8TF01 805 aaKnown RBP15.2■□□□□ 0.02
IRF1-204ENST00000439555 CACNA1SQ13698 1873 aa15.2■□□□□ 0.02
IRF1-204ENST00000439555 RGL2O15211 777 aa15.19■□□□□ 0.02
IRF1-204ENST00000439555 A1BGP04217 495 aa15.19■□□□□ 0.02
IRF1-204ENST00000439555 PDE6BP35913 854 aa15.19■□□□□ 0.02
IRF1-204ENST00000439555 DCTN1Q14203 1278 aa15.19■□□□□ 0.02
IRF1-204ENST00000439555 AIDAQ96BJ3 306 aa15.19■□□□□ 0.02
IRF1-204ENST00000439555 BRIP1Q9BX63 1249 aa15.19■□□□□ 0.02
IRF1-204ENST00000439555 WBP1LQ9NX94 342 aa15.19■□□□□ 0.02
IRF1-204ENST00000439555 USP16Q9Y5T5 823 aa15.19■□□□□ 0.02
IRF1-204ENST00000439555 SLX4Q8IY92 1834 aa15.18■□□□□ 0.02
IRF1-204ENST00000439555 IQCA1LA6NCM1 817 aa15.18■□□□□ 0.02
IRF1-204ENST00000439555 NFE2L2Q16236 605 aa15.18■□□□□ 0.02
IRF1-204ENST00000439555 TBC1D2BQ9UPU7 963 aa15.18■□□□□ 0.02
IRF1-204ENST00000439555 TMEM88BA6NKF7 163 aa15.17■□□□□ 0.02
IRF1-204ENST00000439555 CAMTA2O94983 1202 aa15.17■□□□□ 0.02
IRF1-204ENST00000439555 TBC1D9BQ66K14 1250 aa15.17■□□□□ 0.02
IRF1-204ENST00000439555 CLEC4GQ6UXB4 293 aa15.17■□□□□ 0.02
IRF1-204ENST00000439555 LDHDQ86WU2 507 aa15.17■□□□□ 0.02
IRF1-204ENST00000439555 ITGBL1O95965 494 aaPredicted RBP15.16■□□□□ 0.02
IRF1-204ENST00000439555 SOGA3Q5TF21 947 aa15.16■□□□□ 0.02
IRF1-204ENST00000439555 DZIP3Q86Y13 1208 aaKnown RBP15.16■□□□□ 0.02
IRF1-204ENST00000439555 L3MBTL3Q96JM7 780 aaPredicted RBP15.16■□□□□ 0.02
IRF1-204ENST00000439555 SIPA1L3O60292 1781 aaPredicted RBP15.16■□□□□ 0.02
IRF1-204ENST00000439555 MAPK8IP3Q9UPT6 1336 aa15.16■□□□□ 0.02
IRF1-204ENST00000439555 COL11A2P13942 1736 aaPredicted RBP15.15■□□□□ 0.02
IRF1-204ENST00000439555 CARMIL3Q8ND23 1372 aa15.15■□□□□ 0.02
IRF1-204ENST00000439555 C21orf2O43822 256 aa15.15■□□□□ 0.02
IRF1-204ENST00000439555 DDNO94850 711 aaPredicted RBP15.15■□□□□ 0.02
IRF1-204ENST00000439555 VEGFBP49765 207 aa15.15■□□□□ 0.02
IRF1-204ENST00000439555 RGS19P49795 217 aa15.15■□□□□ 0.02
IRF1-204ENST00000439555 DDX10Q13206 875 aaKnown RBP15.15■□□□□ 0.02
IRF1-204ENST00000439555 BICDL1Q6ZP65 573 aa15.15■□□□□ 0.02
IRF1-204ENST00000439555 ZNF622Q969S3 477 aaKnown RBP eCLIP15.15■□□□□ 0.027e-6■■□□□ 12.8
IRF1-204ENST00000439555 SETDB2Q96T68 719 aa15.15■□□□□ 0.02
IRF1-204ENST00000439555 TAOK3Q9H2K8 898 aa15.15■□□□□ 0.02
IRF1-204ENST00000439555 ZNF330Q9Y3S2 320 aaPredicted RBP15.15■□□□□ 0.02
IRF1-204ENST00000439555 ADAMTSL1Q8N6G6 1762 aa15.14■□□□□ 0.01
IRF1-204ENST00000439555 PRAMEF22A3QJZ6 481 aa15.14■□□□□ 0.01
IRF1-204ENST00000439555 POTEIP0CG38 1075 aa15.14■□□□□ 0.01
IRF1-204ENST00000439555 POTEJP0CG39 1038 aa15.14■□□□□ 0.01
IRF1-204ENST00000439555 CNKSR1Q969H4 720 aa15.14■□□□□ 0.01
IRF1-204ENST00000439555 ZNF652Q9Y2D9 606 aa15.14■□□□□ 0.01
IRF1-204ENST00000439555 RASSF10A6NK89 507 aa15.13■□□□□ 0.01
IRF1-204ENST00000439555 LBX1P52954 281 aa15.13■□□□□ 0.01
IRF1-204ENST00000439555 ABHD8Q96I13 439 aa15.13■□□□□ 0.01
IRF1-204ENST00000439555 TAF1DQ9H5J8 278 aaPredicted RBP15.13■□□□□ 0.01
IRF1-204ENST00000439555 BABAM1Q9NWV8 329 aa15.13■□□□□ 0.01
IRF1-204ENST00000439555 MYBBP1AQ9BQG0 1328 aaKnown RBP15.13■□□□□ 0.01
IRF1-204ENST00000439555 NBPF26B4DH59 902 aa15.12■□□□□ 0.01
IRF1-204ENST00000439555 EIF4A1P60842 406 aaKnown RBP15.12■□□□□ 0.01
IRF1-204ENST00000439555 MAP2K1Q02750 393 aaPredicted RBP15.12■□□□□ 0.01
IRF1-204ENST00000439555 DEFB115Q30KQ5 88 aa15.12■□□□□ 0.01
IRF1-204ENST00000439555 STYK1Q6J9G0 422 aa15.12■□□□□ 0.01
IRF1-204ENST00000439555 PRR5LQ6MZQ0 368 aa15.12■□□□□ 0.01
IRF1-204ENST00000439555 NBPF10Q6P3W6 841 aaKnown RBP15.12■□□□□ 0.01
IRF1-204ENST00000439555 NBPF15Q8N660 670 aa15.12■□□□□ 0.01
IRF1-204ENST00000439555 MIS18AQ9NYP9 233 aa15.12■□□□□ 0.01
IRF1-204ENST00000439555 SCN7AQ01118 1682 aa15.12■□□□□ 0.01
IRF1-204ENST00000439555 LMOD3Q0VAK6 560 aa15.11■□□□□ 0.01
IRF1-204ENST00000439555 CNBD1Q8NA66 436 aa15.11■□□□□ 0.01
IRF1-204ENST00000439555 TRPM7Q96QT4 1865 aa15.1■□□□□ 0.01
IRF1-204ENST00000439555 HSPA8P11142 646 aaKnown RBP15.1■□□□□ 0.01
IRF1-204ENST00000439555 PNMA8AQ86V59 439 aaPredicted RBP15.1■□□□□ 0.01
IRF1-204ENST00000439555 ERVV-1B6SEH8 477 aa15.09■□□□□ 0.01
IRF1-204ENST00000439555 SRGNP10124 158 aa15.09■□□□□ 0.01
IRF1-204ENST00000439555 TMPOP42166 694 aaKnown RBP15.09■□□□□ 0.01
IRF1-204ENST00000439555 PIP4K2AP48426 406 aaPredicted RBP15.09■□□□□ 0.01
IRF1-204ENST00000439555 RIPK4P57078 832 aa15.09■□□□□ 0.01
IRF1-204ENST00000439555 ST5P78524 1137 aa15.09■□□□□ 0.01
IRF1-204ENST00000439555 MLLT1Q03111 559 aaPredicted RBP15.09■□□□□ 0.01
IRF1-204ENST00000439555 FAM161AQ3B820 660 aa15.09■□□□□ 0.01
IRF1-204ENST00000439555 MASTLQ96GX5 879 aa15.09■□□□□ 0.01
IRF1-204ENST00000439555 THUMPD2Q9BTF0 503 aaKnown RBP15.09■□□□□ 0.01
IRF1-204ENST00000439555 NPHP1O15259 732 aa15.08■□□□□ 0
IRF1-204ENST00000439555 TPTE2Q6XPS3 522 aa15.08■□□□□ 0
IRF1-204ENST00000439555 C7orf43Q8WVR3 580 aa15.08■□□□□ 0
IRF1-204ENST00000439555 HACL1Q9UJ83 578 aa15.08■□□□□ 0
IRF1-204ENST00000439555 ERBB4Q15303 1308 aa15.08■□□□□ 0
IRF1-204ENST00000439555 WDR33Q9C0J8 1336 aaKnown RBP15.08■□□□□ 0
IRF1-204ENST00000439555 THSD7BQ9C0I4 1608 aa15.07■□□□□ 0
IRF1-204ENST00000439555 KLRG2A4D1S0 409 aaPredicted RBP15.07■□□□□ 0
IRF1-204ENST00000439555 PRPF40BQ6NWY9 871 aaKnown RBP15.07■□□□□ 0
IRF1-204ENST00000439555 NBPF5PQ86XG9 351 aaPredicted RBP15.07■□□□□ 0
IRF1-204ENST00000439555 ZNF219Q9P2Y4 722 aaPredicted RBP15.07■□□□□ 0
IRF1-204ENST00000439555 BCORQ6W2J9 1755 aa15.06■□□□□ 0
IRF1-204ENST00000439555 CNTROBQ8N137 903 aa15.06■□□□□ 0
IRF1-204ENST00000439555 RUNDC1Q96C34 613 aa15.06■□□□□ 0
IRF1-204ENST00000439555 TSPYL4Q9UJ04 414 aa15.06■□□□□ 0
IRF1-204ENST00000439555 NIP7Q9Y221 180 aaKnown RBP eCLIP15.06■□□□□ 0
IRF1-204ENST00000439555 EPHX2P34913 555 aa15.05■□□□□ -0
IRF1-204ENST00000439555 WDR43Q15061 677 aaKnown RBP eCLIP15.05■□□□□ -0
IRF1-204ENST00000439555 CCDC93Q567U6 631 aa15.05■□□□□ -0
IRF1-204ENST00000439555 PRKRIP1Q9H875 184 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms