RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 RUFY3Q7L099 469 aa16.27■□□□□ 0.2
PCNX3-202ENST00000439247 PDCL2Q8N4E4 241 aa16.27■□□□□ 0.2
PCNX3-202ENST00000439247 KIAA1524Q8TCG1 905 aa16.27■□□□□ 0.2
PCNX3-202ENST00000439247 DCCP43146 1447 aa16.26■□□□□ 0.19
PCNX3-202ENST00000439247 HSPA4P34932 840 aa16.26■□□□□ 0.19
PCNX3-202ENST00000439247 FUCA2Q9BTY2 467 aa16.26■□□□□ 0.19
PCNX3-202ENST00000439247 TSPYL4Q9UJ04 414 aa16.26■□□□□ 0.19
PCNX3-202ENST00000439247 SPG7Q9UQ90 795 aa16.26■□□□□ 0.19
PCNX3-202ENST00000439247 SNX14Q9Y5W7 946 aa16.26■□□□□ 0.19
PCNX3-202ENST00000439247 AATKQ6ZMQ8 1374 aa16.26■□□□□ 0.19
PCNX3-202ENST00000439247 MARF1Q9Y4F3 1742 aaKnown RBP16.26■□□□□ 0.19
PCNX3-202ENST00000439247 UBE2HP62256 183 aa16.26■□□□□ 0.19
PCNX3-202ENST00000439247 UTP14CQ5TAP6 766 aaKnown RBP16.26■□□□□ 0.19
PCNX3-202ENST00000439247 KRT28Q7Z3Y7 464 aa16.26■□□□□ 0.19
PCNX3-202ENST00000439247 NAA30Q147X3 362 aaPredicted RBP16.25■□□□□ 0.19
PCNX3-202ENST00000439247 CAMK4Q16566 473 aa16.25■□□□□ 0.19
PCNX3-202ENST00000439247 USP31Q70CQ4 1352 aa16.25■□□□□ 0.19
PCNX3-202ENST00000439247 F13A1P00488 732 aa16.25■□□□□ 0.19
PCNX3-202ENST00000439247 FAM173BQ6P4H8 233 aa16.25■□□□□ 0.19
PCNX3-202ENST00000439247 TMEM87AQ8NBN3 555 aa16.25■□□□□ 0.19
PCNX3-202ENST00000439247 TULP1O00294 542 aaPredicted RBP16.25■□□□□ 0.19
PCNX3-202ENST00000439247 PTGS1P23219 599 aa16.25■□□□□ 0.19
PCNX3-202ENST00000439247 CCT4P50991 539 aaKnown RBP16.25■□□□□ 0.19
PCNX3-202ENST00000439247 CCDC83Q8IWF9 413 aa16.25■□□□□ 0.19
PCNX3-202ENST00000439247 MAP3K19Q56UN5 1328 aa16.25■□□□□ 0.19
PCNX3-202ENST00000439247 PEAK1Q9H792 1746 aa16.24■□□□□ 0.19
PCNX3-202ENST00000439247 LRMPQ12912 555 aa16.24■□□□□ 0.19
PCNX3-202ENST00000439247 BRINP3Q76B58 766 aa16.24■□□□□ 0.19
PCNX3-202ENST00000439247 TUBGCP6Q96RT7 1819 aa16.24■□□□□ 0.19
PCNX3-202ENST00000439247 SMC3Q9UQE7 1217 aa16.23■□□□□ 0.19
PCNX3-202ENST00000439247 CWC27Q6UX04 472 aaKnown RBP16.23■□□□□ 0.19
PCNX3-202ENST00000439247 TTC14Q96N46 770 aa16.23■□□□□ 0.19
PCNX3-202ENST00000439247 SLAIN2Q9P270 581 aa16.23■□□□□ 0.19
PCNX3-202ENST00000439247 ATP8B2P98198 1209 aa16.23■□□□□ 0.19
PCNX3-202ENST00000439247 COL9A3Q14050 684 aaPredicted RBP16.23■□□□□ 0.19
PCNX3-202ENST00000439247 NRBP1Q9UHY1 535 aa16.23■□□□□ 0.19
PCNX3-202ENST00000439247 CRB1P82279 1406 aa16.22■□□□□ 0.19
PCNX3-202ENST00000439247 VPS37CA5D8V6 355 aaPredicted RBP16.22■□□□□ 0.19
PCNX3-202ENST00000439247 FERMT3Q86UX7 667 aa16.22■□□□□ 0.19
PCNX3-202ENST00000439247 LUZP1Q86V48 1076 aa16.22■□□□□ 0.19
PCNX3-202ENST00000439247 GJB2P29033 226 aa16.22■□□□□ 0.19
PCNX3-202ENST00000439247 MTHFSDQ2M296 383 aaKnown RBP16.22■□□□□ 0.19
PCNX3-202ENST00000439247 CASTP20810 708 aaKnown RBP16.21■□□□□ 0.19
PCNX3-202ENST00000439247 FLIIQ13045 1269 aa16.21■□□□□ 0.19
PCNX3-202ENST00000439247 NECAB1Q8N987 351 aa16.21■□□□□ 0.19
PCNX3-202ENST00000439247 C16orf45Q96MC5 204 aaPredicted RBP16.21■□□□□ 0.19
PCNX3-202ENST00000439247 HAP1P54257 671 aaPredicted RBP16.21■□□□□ 0.19
PCNX3-202ENST00000439247 ADCK5Q3MIX3 580 aa16.21■□□□□ 0.19
PCNX3-202ENST00000439247 STAP2Q9UGK3 403 aa16.21■□□□□ 0.19
PCNX3-202ENST00000439247 CKAP2LQ8IYA6 745 aa16.21■□□□□ 0.18
PCNX3-202ENST00000439247 TRPM3Q9HCF6 1732 aaPredicted RBP16.2■□□□□ 0.18
PCNX3-202ENST00000439247 LIMCH1Q9UPQ0 1083 aa16.2■□□□□ 0.18
PCNX3-202ENST00000439247 LSG1Q9H089 658 aaKnown RBP16.2■□□□□ 0.18
PCNX3-202ENST00000439247 MTMR6Q9Y217 621 aa16.2■□□□□ 0.18
PCNX3-202ENST00000439247 RAD50Q92878 1312 aa16.19■□□□□ 0.18
PCNX3-202ENST00000439247 SGSM2O43147 1006 aa16.19■□□□□ 0.18
PCNX3-202ENST00000439247 SURF6O75683 361 aaKnown RBP16.19■□□□□ 0.18
PCNX3-202ENST00000439247 ANKRD7Q92527 254 aa16.19■□□□□ 0.18
PCNX3-202ENST00000439247 KIF1AQ12756 1690 aa16.19■□□□□ 0.18
PCNX3-202ENST00000439247 LETM1O95202 739 aaPredicted RBP16.19■□□□□ 0.18
PCNX3-202ENST00000439247 LIG1P18858 919 aa16.19■□□□□ 0.18
PCNX3-202ENST00000439247 CHAF1AQ13111 956 aaPredicted RBP16.19■□□□□ 0.18
PCNX3-202ENST00000439247 CCDC186Q7Z3E2 898 aa16.19■□□□□ 0.18
PCNX3-202ENST00000439247 STK31Q9BXU1 1019 aa16.19■□□□□ 0.18
PCNX3-202ENST00000439247 ST3GAL1Q11201 340 aa16.19■□□□□ 0.18
PCNX3-202ENST00000439247 PI4K2BQ8TCG2 481 aa16.19■□□□□ 0.18
PCNX3-202ENST00000439247 CABLES1Q8TDN4 633 aa16.19■□□□□ 0.18
PCNX3-202ENST00000439247 USP44Q9H0E7 712 aa16.19■□□□□ 0.18
PCNX3-202ENST00000439247 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.18■□□□□ 0.18
PCNX3-202ENST00000439247 NCBP1Q09161 790 aaKnown RBP16.18■□□□□ 0.18
PCNX3-202ENST00000439247 GTPBP4Q9BZE4 634 aaKnown RBP16.18■□□□□ 0.18
PCNX3-202ENST00000439247 DIAPH3Q9NSV4 1193 aa16.18■□□□□ 0.18
PCNX3-202ENST00000439247 PTH1RQ03431 593 aa16.18■□□□□ 0.18
PCNX3-202ENST00000439247 GNAI3P08754 354 aa16.17■□□□□ 0.18
PCNX3-202ENST00000439247 AMPHP49418 695 aa16.17■□□□□ 0.18
PCNX3-202ENST00000439247 RTF1Q92541 710 aaKnown RBP16.17■□□□□ 0.18
PCNX3-202ENST00000439247 HYPKQ9NX55 129 aa16.17■□□□□ 0.18
PCNX3-202ENST00000439247 LTBP4Q8N2S1 1624 aa16.17■□□□□ 0.18
PCNX3-202ENST00000439247 PPP1R42Q7Z4L9 355 aa16.17■□□□□ 0.18
PCNX3-202ENST00000439247 TTC6Q86TZ1 520 aa16.17■□□□□ 0.18
PCNX3-202ENST00000439247 IL17RAQ96F46 866 aa16.17■□□□□ 0.18
PCNX3-202ENST00000439247 TCEANC2Q96MN5 208 aa16.17■□□□□ 0.18
PCNX3-202ENST00000439247 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.17■□□□□ 0.18
PCNX3-202ENST00000439247 DRC7Q8IY82 874 aa16.17■□□□□ 0.18
PCNX3-202ENST00000439247 JAKMIP1Q96N16 626 aaKnown RBP16.17■□□□□ 0.18
PCNX3-202ENST00000439247 MRVI1Q9Y6F6 885 aa16.17■□□□□ 0.18
PCNX3-202ENST00000439247 NPHP3Q7Z494 1330 aa16.16■□□□□ 0.18
PCNX3-202ENST00000439247 PRPF40BQ6NWY9 871 aaKnown RBP16.16■□□□□ 0.18
PCNX3-202ENST00000439247 PHAXQ9H814 394 aaKnown RBP16.16■□□□□ 0.18
PCNX3-202ENST00000439247 PXDNQ92626 1479 aa16.16■□□□□ 0.18
PCNX3-202ENST00000439247 CTIFO43310 598 aaKnown RBP16.16■□□□□ 0.18
PCNX3-202ENST00000439247 GCP02774 474 aa16.16■□□□□ 0.18
PCNX3-202ENST00000439247 CCDC192P0DO97 292 aa16.16■□□□□ 0.18
PCNX3-202ENST00000439247 LTV1Q96GA3 475 aaPredicted RBP16.16■□□□□ 0.18
PCNX3-202ENST00000439247 TFIP11Q9UBB9 837 aaKnown RBP16.16■□□□□ 0.18
PCNX3-202ENST00000439247 NFAT5O94916 1531 aa16.15■□□□□ 0.18
PCNX3-202ENST00000439247 SOS1Q07889 1333 aaPredicted RBP16.15■□□□□ 0.18
PCNX3-202ENST00000439247 UBTFL1P0CB47 393 aaPredicted RBP16.15■□□□□ 0.18
PCNX3-202ENST00000439247 HOXC9P31274 260 aa16.15■□□□□ 0.18
PCNX3-202ENST00000439247 ME3Q16798 604 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms