RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 CLDN10P78369 228 aa9.14□□□□□ -0.95
UPP2-IT1-201ENST00000439185 SH3PXD2AQ5TCZ1 1133 aa9.14□□□□□ -0.95
UPP2-IT1-201ENST00000439185 USP17L2Q6R6M4 530 aa9.14□□□□□ -0.95
UPP2-IT1-201ENST00000439185 USP17L1Q7RTZ2 530 aa9.14□□□□□ -0.95
UPP2-IT1-201ENST00000439185 PLEKHM2Q8IWE5 1019 aa9.14□□□□□ -0.95
UPP2-IT1-201ENST00000439185 C7orf43Q8WVR3 580 aa9.14□□□□□ -0.95
UPP2-IT1-201ENST00000439185 ATP1A2P50993 1020 aa9.13□□□□□ -0.95
UPP2-IT1-201ENST00000439185 UCN2Q96RP3 112 aa9.13□□□□□ -0.95
UPP2-IT1-201ENST00000439185 NOP53Q9NZM5 478 aaKnown RBP9.13□□□□□ -0.95
UPP2-IT1-201ENST00000439185 ATP9BO43861 1147 aa9.12□□□□□ -0.95
UPP2-IT1-201ENST00000439185 C1QTNF9BB2RNN3 333 aa9.11□□□□□ -0.95
UPP2-IT1-201ENST00000439185 SFSWAPQ12872 951 aaKnown RBP9.11□□□□□ -0.95
UPP2-IT1-201ENST00000439185 SYT9Q86SS6 491 aa9.11□□□□□ -0.95
UPP2-IT1-201ENST00000439185 OGFOD1Q8N543 542 aa9.11□□□□□ -0.95
UPP2-IT1-201ENST00000439185 RHPN1Q8TCX5 695 aa9.11□□□□□ -0.95
UPP2-IT1-201ENST00000439185 TSPAN10Q9H1Z9 355 aaPredicted RBP9.11□□□□□ -0.95
UPP2-IT1-201ENST00000439185 MKRN1Q9UHC7 482 aaKnown RBP9.11□□□□□ -0.95
UPP2-IT1-201ENST00000439185 HCN4Q9Y3Q4 1203 aa9.11□□□□□ -0.95
UPP2-IT1-201ENST00000439185 K7ELQ4 463 aaPredicted RBP9.1□□□□□ -0.95
UPP2-IT1-201ENST00000439185 CD163Q86VB7 1156 aa9.1□□□□□ -0.95
UPP2-IT1-201ENST00000439185 LARGE2Q8N3Y3 721 aa9.1□□□□□ -0.95
UPP2-IT1-201ENST00000439185 GPC6Q9Y625 555 aaPredicted RBP9.1□□□□□ -0.95
UPP2-IT1-201ENST00000439185 ELOA3CA0A087WX78 387 aaPredicted RBP9.09□□□□□ -0.95
UPP2-IT1-201ENST00000439185 PALM3A6NDB9 673 aaPredicted RBP9.09□□□□□ -0.95
UPP2-IT1-201ENST00000439185 ELOA3DA6NLF2 546 aaPredicted RBP9.09□□□□□ -0.95
UPP2-IT1-201ENST00000439185 FURINP09958 794 aa9.09□□□□□ -0.95
UPP2-IT1-201ENST00000439185 ALAS2P22557 587 aa9.09□□□□□ -0.95
UPP2-IT1-201ENST00000439185 PSMA6P60900 246 aaKnown RBP9.09□□□□□ -0.95
UPP2-IT1-201ENST00000439185 ELOA3BQ3SY89 546 aa9.09□□□□□ -0.95
UPP2-IT1-201ENST00000439185 ELOA3Q8NG57 546 aa9.09□□□□□ -0.95
UPP2-IT1-201ENST00000439185 TRIM11Q96F44 468 aa9.09□□□□□ -0.95
UPP2-IT1-201ENST00000439185 PLVAPQ9BX97 442 aa9.09□□□□□ -0.95
UPP2-IT1-201ENST00000439185 CHMP3Q9Y3E7 222 aa9.09□□□□□ -0.95
UPP2-IT1-201ENST00000439185 CHRNA4P43681 627 aa9.08□□□□□ -0.96
UPP2-IT1-201ENST00000439185 SLC30A3Q99726 388 aa9.08□□□□□ -0.96
UPP2-IT1-201ENST00000439185 SFI1A8K8P3 1242 aa9.07□□□□□ -0.96
UPP2-IT1-201ENST00000439185 M0R2N6 131 aa9.07□□□□□ -0.96
UPP2-IT1-201ENST00000439185 C1orf53Q5VUE5 145 aa9.07□□□□□ -0.96
UPP2-IT1-201ENST00000439185 TSEN2Q8NCE0 465 aaKnown RBP9.07□□□□□ -0.96
UPP2-IT1-201ENST00000439185 ZNF594Q96JF6 807 aaPredicted RBP9.07□□□□□ -0.96
UPP2-IT1-201ENST00000439185 PHACTR1Q9C0D0 580 aa9.07□□□□□ -0.96
UPP2-IT1-201ENST00000439185 RBM19Q9Y4C8 960 aaKnown RBP9.07□□□□□ -0.96
UPP2-IT1-201ENST00000439185 SIN3BO75182 1162 aa9.06□□□□□ -0.96
UPP2-IT1-201ENST00000439185 HSH2DQ96JZ2 352 aa9.06□□□□□ -0.96
UPP2-IT1-201ENST00000439185 CEP63Q96MT8 703 aa9.06□□□□□ -0.96
UPP2-IT1-201ENST00000439185 MDFIQ99750 246 aa9.06□□□□□ -0.96
UPP2-IT1-201ENST00000439185 ANKIB1Q9P2G1 1089 aa9.06□□□□□ -0.96
UPP2-IT1-201ENST00000439185 PPP1R12BO60237 982 aaPredicted RBP9.05□□□□□ -0.96
UPP2-IT1-201ENST00000439185 HIRAP54198 1017 aaPredicted RBP9.05□□□□□ -0.96
UPP2-IT1-201ENST00000439185 POTEAQ6S8J7 498 aa9.05□□□□□ -0.96
UPP2-IT1-201ENST00000439185 SIX5Q8N196 739 aa9.05□□□□□ -0.96
UPP2-IT1-201ENST00000439185 CLUAP1Q96AJ1 413 aa9.05□□□□□ -0.96
UPP2-IT1-201ENST00000439185 TFIP11Q9UBB9 837 aaKnown RBP9.05□□□□□ -0.96
UPP2-IT1-201ENST00000439185 ADARB2-AS1A8MUL3 147 aa9.04□□□□□ -0.96
UPP2-IT1-201ENST00000439185 DKK1O94907 266 aa9.04□□□□□ -0.96
UPP2-IT1-201ENST00000439185 SPEM2Q0P670 501 aa9.04□□□□□ -0.96
UPP2-IT1-201ENST00000439185 ZNF280CQ8ND82 737 aa9.04□□□□□ -0.96
UPP2-IT1-201ENST00000439185 BRD7Q9NPI1 651 aa9.04□□□□□ -0.96
UPP2-IT1-201ENST00000439185 C21orf2O43822 256 aa9.03□□□□□ -0.96
UPP2-IT1-201ENST00000439185 RASA1P20936 1047 aa9.03□□□□□ -0.96
UPP2-IT1-201ENST00000439185 RAB44Q7Z6P3 723 aaPredicted RBP9.03□□□□□ -0.96
UPP2-IT1-201ENST00000439185 SUSD3Q96L08 255 aa9.03□□□□□ -0.96
UPP2-IT1-201ENST00000439185 KCNH4Q9UQ05 1017 aa9.03□□□□□ -0.96
UPP2-IT1-201ENST00000439185 ATAD2Q6PL18 1390 aa9.02□□□□□ -0.97
UPP2-IT1-201ENST00000439185 SPATA31C1P0DKV0 1188 aa9.02□□□□□ -0.97
UPP2-IT1-201ENST00000439185 NEUROD1Q13562 356 aa9.02□□□□□ -0.97
UPP2-IT1-201ENST00000439185 GLMNQ92990 594 aa9.02□□□□□ -0.97
UPP2-IT1-201ENST00000439185 TNFRSF25Q93038 417 aa9.02□□□□□ -0.97
UPP2-IT1-201ENST00000439185 STARD13Q9Y3M8 1113 aa9.02□□□□□ -0.97
UPP2-IT1-201ENST00000439185 M0R082 166 aa9.01□□□□□ -0.97
UPP2-IT1-201ENST00000439185 KCNQ4P56696 695 aa9.01□□□□□ -0.97
UPP2-IT1-201ENST00000439185 TYRO3Q06418 890 aa9.01□□□□□ -0.97
UPP2-IT1-201ENST00000439185 PROSER2Q86WR7 435 aaPredicted RBP9.01□□□□□ -0.97
UPP2-IT1-201ENST00000439185 ALDH16A1Q8IZ83 802 aa9.01□□□□□ -0.97
UPP2-IT1-201ENST00000439185 FNBP4Q8N3X1 1017 aaPredicted RBP9.01□□□□□ -0.97
UPP2-IT1-201ENST00000439185 ZNF417Q8TAU3 575 aa9.01□□□□□ -0.97
UPP2-IT1-201ENST00000439185 SCG3Q8WXD2 468 aaKnown RBP9.01□□□□□ -0.97
UPP2-IT1-201ENST00000439185 ZNF587Q96SQ5 575 aaPredicted RBP9.01□□□□□ -0.97
UPP2-IT1-201ENST00000439185 SPDYE3A6NKU9 549 aa9□□□□□ -0.97
UPP2-IT1-201ENST00000439185 ADH7P40394 386 aa9□□□□□ -0.97
UPP2-IT1-201ENST00000439185 DOC2BQ14184 412 aa9□□□□□ -0.97
UPP2-IT1-201ENST00000439185 CHMP7Q8WUX9 453 aaPredicted RBP9□□□□□ -0.97
UPP2-IT1-201ENST00000439185 C2orf49Q9BVC5 232 aaPredicted RBP9□□□□□ -0.97
UPP2-IT1-201ENST00000439185 MAFBQ9Y5Q3 323 aaPredicted RBP9□□□□□ -0.97
UPP2-IT1-201ENST00000439185 ALBP02768 609 aa8.99□□□□□ -0.97
UPP2-IT1-201ENST00000439185 GATA4P43694 442 aa8.99□□□□□ -0.97
UPP2-IT1-201ENST00000439185 SEC13P55735 322 aa8.99□□□□□ -0.97
UPP2-IT1-201ENST00000439185 PRRT3Q5FWE3 981 aa8.99□□□□□ -0.97
UPP2-IT1-201ENST00000439185 XP32Q5T750 250 aa8.99□□□□□ -0.97
UPP2-IT1-201ENST00000439185 C8orf86Q6ZUL3 223 aa8.99□□□□□ -0.97
UPP2-IT1-201ENST00000439185 MICALL1Q8N3F8 863 aa8.99□□□□□ -0.97
UPP2-IT1-201ENST00000439185 NGLY1Q96IV0 654 aa8.99□□□□□ -0.97
UPP2-IT1-201ENST00000439185 COL9A3Q14050 684 aaPredicted RBP8.98□□□□□ -0.97
UPP2-IT1-201ENST00000439185 LARP1Q6PKG0 1096 aaKnown RBP8.98□□□□□ -0.97
UPP2-IT1-201ENST00000439185 STAG2Q8N3U4 1231 aa8.98□□□□□ -0.97
UPP2-IT1-201ENST00000439185 GAS2L2Q8NHY3 880 aa8.98□□□□□ -0.97
UPP2-IT1-201ENST00000439185 BHMTQ93088 406 aa8.98□□□□□ -0.97
UPP2-IT1-201ENST00000439185 FAM229AH3BQW9 127 aa8.97□□□□□ -0.97
UPP2-IT1-201ENST00000439185 LGR5O75473 907 aa8.97□□□□□ -0.97
UPP2-IT1-201ENST00000439185 BTLAQ7Z6A9 289 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms