RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, human

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCRN1-208	ENST00000438497	POLR3GL	Q9BT43	218 aa		11.83	□□□□□ -0.52
SCRN1-208	ENST00000438497	TBC1D2B	Q9UPU7	963 aa		11.83	□□□□□ -0.52
SCRN1-208	ENST00000438497	SLX4	Q8IY92	1834 aa		11.83	□□□□□ -0.52
SCRN1-208	ENST00000438497	SCN11A	Q9UI33	1791 aa		11.82	□□□□□ -0.52
SCRN1-208	ENST00000438497	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.82	□□□□□ -0.52
SCRN1-208	ENST00000438497	GPR101	Q96P66	508 aa	Predicted RBP	11.82	□□□□□ -0.52
SCRN1-208	ENST00000438497	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.82	□□□□□ -0.52
SCRN1-208	ENST00000438497	ANKRD31	Q8N7Z5	1873 aa		11.82	□□□□□ -0.52
SCRN1-208	ENST00000438497	ECE1	P42892	770 aa		11.81	□□□□□ -0.52
SCRN1-208	ENST00000438497	ST5	P78524	1137 aa		11.81	□□□□□ -0.52
SCRN1-208	ENST00000438497	GRM1	Q13255	1194 aa		11.81	□□□□□ -0.52
SCRN1-208	ENST00000438497	NCBP3	Q53F19	620 aa	Known RBP	11.81	□□□□□ -0.52
SCRN1-208	ENST00000438497	NPM2	Q86SE8	214 aa	Known RBP	11.81	□□□□□ -0.52
SCRN1-208	ENST00000438497	CNBD1	Q8NA66	436 aa		11.81	□□□□□ -0.52
SCRN1-208	ENST00000438497	CAPNS2	Q96L46	248 aa		11.81	□□□□□ -0.52
SCRN1-208	ENST00000438497	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
SCRN1-208	ENST00000438497	CCDC93	Q567U6	631 aa		11.8	□□□□□ -0.52
SCRN1-208	ENST00000438497	TTC5	Q8N0Z6	440 aa		11.8	□□□□□ -0.52
SCRN1-208	ENST00000438497	C7orf43	Q8WVR3	580 aa		11.8	□□□□□ -0.52
SCRN1-208	ENST00000438497	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.8	□□□□□ -0.52
SCRN1-208	ENST00000438497	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
SCRN1-208	ENST00000438497	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.8	□□□□□ -0.52
SCRN1-208	ENST00000438497	ZNF541	Q9H0D2	1346 aa		11.8	□□□□□ -0.52
SCRN1-208	ENST00000438497	CACNA1S	Q13698	1873 aa		11.79	□□□□□ -0.52
SCRN1-208	ENST00000438497	CYP4F22	Q6NT55	531 aa		11.79	□□□□□ -0.52
SCRN1-208	ENST00000438497	MORC1	Q86VD1	984 aa		11.79	□□□□□ -0.52
SCRN1-208	ENST00000438497	TSKS	Q9UJT2	592 aa		11.79	□□□□□ -0.52
SCRN1-208	ENST00000438497	RNF123	Q5XPI4	1314 aa		11.79	□□□□□ -0.52
SCRN1-208	ENST00000438497	IL13	P35225	146 aa		11.78	□□□□□ -0.52
SCRN1-208	ENST00000438497	RTKN2	Q8IZC4	609 aa		11.78	□□□□□ -0.52
SCRN1-208	ENST00000438497	GPC2	Q8N158	579 aa		11.78	□□□□□ -0.52
SCRN1-208	ENST00000438497	SYNE4	Q8N205	404 aa		11.78	□□□□□ -0.52
SCRN1-208	ENST00000438497	MCOLN1	Q9GZU1	580 aa		11.78	□□□□□ -0.52
SCRN1-208	ENST00000438497	FZD9	O00144	591 aa		11.77	□□□□□ -0.53
SCRN1-208	ENST00000438497	NPR1	P16066	1061 aa		11.77	□□□□□ -0.53
SCRN1-208	ENST00000438497	MAP2K2	P36507	400 aa		11.77	□□□□□ -0.53
SCRN1-208	ENST00000438497	IL6ST	P40189	918 aa	Predicted RBP	11.77	□□□□□ -0.53
SCRN1-208	ENST00000438497	FMR1	Q06787	632 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
SCRN1-208	ENST00000438497	JDP2	Q8WYK2	163 aa		11.77	□□□□□ -0.53
SCRN1-208	ENST00000438497	COL11A2	P13942	1736 aa	Predicted RBP	11.77	□□□□□ -0.53
SCRN1-208	ENST00000438497	AOC2	O75106	756 aa		11.76	□□□□□ -0.53
SCRN1-208	ENST00000438497	A1BG	P04217	495 aa		11.76	□□□□□ -0.53
SCRN1-208	ENST00000438497	IARS	P41252	1262 aa	Known RBP	11.76	□□□□□ -0.53
SCRN1-208	ENST00000438497	MTHFSD	Q2M296	383 aa	Known RBP	11.76	□□□□□ -0.53
SCRN1-208	ENST00000438497	OLFM4	Q6UX06	510 aa		11.76	□□□□□ -0.53
SCRN1-208	ENST00000438497	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.76	□□□□□ -0.53
SCRN1-208	ENST00000438497	PANK3	Q9H999	370 aa		11.76	□□□□□ -0.53
SCRN1-208	ENST00000438497	GJA3	Q9Y6H8	435 aa		11.76	□□□□□ -0.53
SCRN1-208	ENST00000438497	CAMTA2	O94983	1202 aa		11.75	□□□□□ -0.53
SCRN1-208	ENST00000438497	HMOX1	P09601	288 aa		11.75	□□□□□ -0.53
SCRN1-208	ENST00000438497	LMOD1	P29536	600 aa	Predicted RBP	11.75	□□□□□ -0.53
SCRN1-208	ENST00000438497	ALDH1B1	P30837	517 aa		11.75	□□□□□ -0.53
SCRN1-208	ENST00000438497	EIF6	P56537	245 aa	Known RBP	11.75	□□□□□ -0.53
SCRN1-208	ENST00000438497	DGKZ	Q13574	1117 aa		11.75	□□□□□ -0.53
SCRN1-208	ENST00000438497	CST9	Q5W186	159 aa		11.75	□□□□□ -0.53
SCRN1-208	ENST00000438497	ZNF496	Q96IT1	587 aa	Predicted RBP	11.75	□□□□□ -0.53
SCRN1-208	ENST00000438497	CASP8AP2	Q9UKL3	1982 aa		11.75	□□□□□ -0.53
SCRN1-208	ENST00000438497	ADAMTSL1	Q8N6G6	1762 aa		11.74	□□□□□ -0.53
SCRN1-208	ENST00000438497	TPTE2	Q6XPS3	522 aa		11.74	□□□□□ -0.53
SCRN1-208	ENST00000438497	DZIP3	Q86Y13	1208 aa	Known RBP	11.74	□□□□□ -0.53
SCRN1-208	ENST00000438497	TLL2	Q9Y6L7	1015 aa		11.74	□□□□□ -0.53
SCRN1-208	ENST00000438497	KLRG2	A4D1S0	409 aa	Predicted RBP	11.73	□□□□□ -0.53
SCRN1-208	ENST00000438497	CA12	O43570	354 aa		11.73	□□□□□ -0.53
SCRN1-208	ENST00000438497	EPS15	P42566	896 aa		11.73	□□□□□ -0.53
SCRN1-208	ENST00000438497	TEF	Q10587	303 aa		11.73	□□□□□ -0.53
SCRN1-208	ENST00000438497	ZNF790	Q6PG37	636 aa		11.73	□□□□□ -0.53
SCRN1-208	ENST00000438497	CLEC4G	Q6UXB4	293 aa		11.73	□□□□□ -0.53
SCRN1-208	ENST00000438497	HEG1	Q9ULI3	1381 aa		11.73	□□□□□ -0.53
SCRN1-208	ENST00000438497	ARFGEF2	Q9Y6D5	1785 aa		11.72	□□□□□ -0.53
SCRN1-208	ENST00000438497	TRAF5	O00463	557 aa		11.72	□□□□□ -0.53
SCRN1-208	ENST00000438497	USP50	Q70EL3	339 aa	Predicted RBP	11.72	□□□□□ -0.53
SCRN1-208	ENST00000438497	FMNL2	Q96PY5	1086 aa		11.72	□□□□□ -0.53
SCRN1-208	ENST00000438497	FAM177B	A6PVY3	158 aa		11.71	□□□□□ -0.53
SCRN1-208	ENST00000438497	GTF2E1	P29083	439 aa	Predicted RBP	11.71	□□□□□ -0.53
SCRN1-208	ENST00000438497	IL17RE	Q8NFR9	667 aa		11.71	□□□□□ -0.53
SCRN1-208	ENST00000438497	PSMD1	Q99460	953 aa		11.71	□□□□□ -0.53
SCRN1-208	ENST00000438497	RTN4	Q9NQC3	1192 aa	Known RBP	11.71	□□□□□ -0.53
SCRN1-208	ENST00000438497	TRPM7	Q96QT4	1865 aa		11.71	□□□□□ -0.53
SCRN1-208	ENST00000438497	MRC1	P22897	1456 aa		11.7	□□□□□ -0.54
SCRN1-208	ENST00000438497	SAPCD2	Q86UD0	394 aa		11.7	□□□□□ -0.54
SCRN1-208	ENST00000438497	ZNF652	Q9Y2D9	606 aa		11.7	□□□□□ -0.54
SCRN1-208	ENST00000438497	USP16	Q9Y5T5	823 aa		11.7	□□□□□ -0.54
SCRN1-208	ENST00000438497	UBR2	Q8IWV8	1755 aa		11.69	□□□□□ -0.54
SCRN1-208	ENST00000438497	PDE4DIP	Q5VU43	2346 aa		11.69	□□□□□ -0.54
SCRN1-208	ENST00000438497	CELF2	O95319	508 aa	Known RBP	11.69	□□□□□ -0.54
SCRN1-208	ENST00000438497	PIP4K2A	P48426	406 aa	Predicted RBP	11.69	□□□□□ -0.54
SCRN1-208	ENST00000438497	SCNN1D	P51172	638 aa		11.69	□□□□□ -0.54
SCRN1-208	ENST00000438497	BRPF1	P55201	1214 aa	Predicted RBP	11.69	□□□□□ -0.54
SCRN1-208	ENST00000438497	CC2D2B	Q6DHV5	1058 aa		11.69	□□□□□ -0.54
SCRN1-208	ENST00000438497	CIAPIN1	Q6FI81	312 aa		11.69	□□□□□ -0.54
SCRN1-208	ENST00000438497	LARGE2	Q8N3Y3	721 aa		11.69	□□□□□ -0.54
SCRN1-208	ENST00000438497	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
SCRN1-208	ENST00000438497	KNSTRN	Q9Y448	316 aa		11.69	□□□□□ -0.54
SCRN1-208	ENST00000438497	SCN7A	Q01118	1682 aa		11.68	□□□□□ -0.54
SCRN1-208	ENST00000438497	TNRC18	O15417	2968 aa	Predicted RBP	11.68	□□□□□ -0.54
SCRN1-208	ENST00000438497	GNAT3	A8MTJ3	354 aa		11.68	□□□□□ -0.54
SCRN1-208	ENST00000438497	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.68	□□□□□ -0.54
SCRN1-208	ENST00000438497	HHIPL1	Q96JK4	782 aa		11.68	□□□□□ -0.54
SCRN1-208	ENST00000438497	KCNQ3	O43525	872 aa		11.67	□□□□□ -0.54
SCRN1-208	ENST00000438497	DIAPH1	O60610	1272 aa	Known RBP	11.67	□□□□□ -0.54

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