RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 RAB11FIP3O75154 756 aa15.46■□□□□ 0.07
HCG18-236ENST00000438412 SASH1O94885 1247 aa15.46■□□□□ 0.07
HCG18-236ENST00000438412 RASEFQ8IZ41 740 aa15.46■□□□□ 0.07
HCG18-236ENST00000438412 TNS3Q68CZ2 1445 aa15.46■□□□□ 0.07
HCG18-236ENST00000438412 FSD2A1L4K1 749 aa15.46■□□□□ 0.07
HCG18-236ENST00000438412 BRINP3Q76B58 766 aa15.46■□□□□ 0.07
HCG18-236ENST00000438412 AACSQ86V21 672 aa15.46■□□□□ 0.07
HCG18-236ENST00000438412 CHGBP05060 677 aa15.45■□□□□ 0.06
HCG18-236ENST00000438412 IFNL2Q8IZJ0 200 aa15.45■□□□□ 0.06
HCG18-236ENST00000438412 LINS1Q8NG48 757 aa15.45■□□□□ 0.06
HCG18-236ENST00000438412 EAF2Q96CJ1 260 aaPredicted RBP15.45■□□□□ 0.06
HCG18-236ENST00000438412 CCDC9Q9Y3X0 531 aaKnown RBP15.45■□□□□ 0.06
HCG18-236ENST00000438412 SPATA31A3Q5VYP0 1347 aa15.45■□□□□ 0.06
HCG18-236ENST00000438412 ADAMTS7Q9UKP4 1686 aa15.45■□□□□ 0.06
HCG18-236ENST00000438412 EDC3Q96F86 508 aaKnown RBP15.45■□□□□ 0.06
HCG18-236ENST00000438412 NEURL1BA8MQ27 555 aa15.44■□□□□ 0.06
HCG18-236ENST00000438412 CYP2E1P05181 493 aaPredicted RBP15.44■□□□□ 0.06
HCG18-236ENST00000438412 LRP10Q7Z4F1 713 aa15.44■□□□□ 0.06
HCG18-236ENST00000438412 CADPS2Q86UW7 1296 aa15.44■□□□□ 0.06
HCG18-236ENST00000438412 PTH1RQ03431 593 aa15.44■□□□□ 0.06
HCG18-236ENST00000438412 XIRP1Q702N8 1843 aaKnown RBP15.43■□□□□ 0.06
HCG18-236ENST00000438412 OVOS2A0A0G2JMS6 1433 aa15.43■□□□□ 0.06
HCG18-236ENST00000438412 SGSM2O43147 1006 aa15.43■□□□□ 0.06
HCG18-236ENST00000438412 ALDH1L1O75891 902 aa15.43■□□□□ 0.06
HCG18-236ENST00000438412 MTX1Q13505 466 aa15.43■□□□□ 0.06
HCG18-236ENST00000438412 TTC5Q8N0Z6 440 aa15.43■□□□□ 0.06
HCG18-236ENST00000438412 CLASRPQ8N2M8 674 aaKnown RBP15.43■□□□□ 0.06
HCG18-236ENST00000438412 ZNF335Q9H4Z2 1342 aaPredicted RBP15.43■□□□□ 0.06
HCG18-236ENST00000438412 PRDM11Q9NQV5 511 aa15.43■□□□□ 0.06
HCG18-236ENST00000438412 STRN4Q9NRL3 753 aa15.43■□□□□ 0.06
HCG18-236ENST00000438412 IFIT2P09913 472 aaKnown RBP15.42■□□□□ 0.06
HCG18-236ENST00000438412 NCLP19338 710 aaKnown RBP15.42■□□□□ 0.06
HCG18-236ENST00000438412 CABP4P57796 275 aa15.42■□□□□ 0.06
HCG18-236ENST00000438412 GCKRQ14397 625 aa15.42■□□□□ 0.06
HCG18-236ENST00000438412 TPRNQ4KMQ1 711 aa15.42■□□□□ 0.06
HCG18-236ENST00000438412 TOM1L2Q6ZVM7 507 aa15.42■□□□□ 0.06
HCG18-236ENST00000438412 UBE3BQ7Z3V4 1068 aa15.42■□□□□ 0.06
HCG18-236ENST00000438412 FAM227BQ96M60 508 aa15.42■□□□□ 0.06
HCG18-236ENST00000438412 LSG1Q9H089 658 aaKnown RBP15.42■□□□□ 0.06
HCG18-236ENST00000438412 CNTROBQ8N137 903 aa15.42■□□□□ 0.06
HCG18-236ENST00000438412 BOLA2Q9H3K6 86 aa15.42■□□□□ 0.06
HCG18-236ENST00000438412 NSFL1CQ9UNZ2 370 aaKnown RBP15.42■□□□□ 0.06
HCG18-236ENST00000438412 DDX49Q9Y6V7 483 aaKnown RBP15.42■□□□□ 0.06
HCG18-236ENST00000438412 AOX1Q06278 1338 aa15.41■□□□□ 0.06
HCG18-236ENST00000438412 DDX58O95786 925 aaKnown RBP15.41■□□□□ 0.06
HCG18-236ENST00000438412 HSPA4P34932 840 aa15.41■□□□□ 0.06
HCG18-236ENST00000438412 RBM27Q9P2N5 1060 aaKnown RBP15.41■□□□□ 0.06
HCG18-236ENST00000438412 SNX14Q9Y5W7 946 aa15.41■□□□□ 0.06
HCG18-236ENST00000438412 ANKRD13DQ6ZTN6 518 aa15.41■□□□□ 0.06
HCG18-236ENST00000438412 DCAF5Q96JK2 942 aa15.41■□□□□ 0.06
HCG18-236ENST00000438412 RAD50Q92878 1312 aa15.4■□□□□ 0.06
HCG18-236ENST00000438412 NBPF26B4DH59 902 aa15.4■□□□□ 0.06
HCG18-236ENST00000438412 PRPF40AO75400 957 aaKnown RBP15.4■□□□□ 0.06
HCG18-236ENST00000438412 MCCP23508 829 aa15.4■□□□□ 0.06
HCG18-236ENST00000438412 ADCK5Q3MIX3 580 aa15.4■□□□□ 0.06
HCG18-236ENST00000438412 NBPF14Q5TI25 921 aa15.4■□□□□ 0.06
HCG18-236ENST00000438412 NBPF10Q6P3W6 841 aaKnown RBP15.4■□□□□ 0.06
HCG18-236ENST00000438412 NBPF15Q8N660 670 aa15.4■□□□□ 0.06
HCG18-236ENST00000438412 ECHDC1Q9NTX5 307 aa15.4■□□□□ 0.06
HCG18-236ENST00000438412 KAT6BQ8WYB5 2073 aa15.4■□□□□ 0.06
HCG18-236ENST00000438412 SNRPA1P09661 255 aaKnown RBP15.39■□□□□ 0.05
HCG18-236ENST00000438412 TTLL7Q6ZT98 887 aa15.39■□□□□ 0.05
HCG18-236ENST00000438412 TAF6LQ9Y6J9 622 aa15.39■□□□□ 0.05
HCG18-236ENST00000438412 GLRX3O76003 335 aaKnown RBP15.39■□□□□ 0.05
HCG18-236ENST00000438412 A1BGP04217 495 aa15.39■□□□□ 0.05
HCG18-236ENST00000438412 CAVIN1Q6NZI2 390 aaKnown RBP15.39■□□□□ 0.05
HCG18-236ENST00000438412 LARP1Q6PKG0 1096 aaKnown RBP15.39■□□□□ 0.05
HCG18-236ENST00000438412 METTL22Q9BUU2 404 aaPredicted RBP15.39■□□□□ 0.05
HCG18-236ENST00000438412 GRPEL1Q9HAV7 217 aa15.39■□□□□ 0.05
HCG18-236ENST00000438412 GDPD2Q9HCC8 539 aa15.39■□□□□ 0.05
HCG18-236ENST00000438412 DIAPH3Q9NSV4 1193 aa15.39■□□□□ 0.05
HCG18-236ENST00000438412 LMBRD1Q9NUN5 540 aa15.39■□□□□ 0.05
HCG18-236ENST00000438412 LARGE1O95461 756 aa15.38■□□□□ 0.05
HCG18-236ENST00000438412 G3BP1Q13283 466 aaKnown RBP eCLIP15.38■□□□□ 0.05
HCG18-236ENST00000438412 L1TD1Q5T7N2 865 aaKnown RBP15.38■□□□□ 0.05
HCG18-236ENST00000438412 ZNF330Q9Y3S2 320 aaPredicted RBP15.38■□□□□ 0.05
HCG18-236ENST00000438412 NEXNQ0ZGT2 675 aa15.38■□□□□ 0.05
HCG18-236ENST00000438412 PRPF40BQ6NWY9 871 aaKnown RBP15.38■□□□□ 0.05
HCG18-236ENST00000438412 FMNL2Q96PY5 1086 aa15.38■□□□□ 0.05
HCG18-236ENST00000438412 UTYO14607 1347 aa15.38■□□□□ 0.05
HCG18-236ENST00000438412 GLI3P10071 1580 aa15.37■□□□□ 0.05
HCG18-236ENST00000438412 NUCB2P80303 420 aa15.37■□□□□ 0.05
HCG18-236ENST00000438412 SLFNL1Q499Z3 407 aa15.37■□□□□ 0.05
HCG18-236ENST00000438412 HSP90AB4PQ58FF6 505 aa15.37■□□□□ 0.05
HCG18-236ENST00000438412 GPT2Q8TD30 523 aa15.37■□□□□ 0.05
HCG18-236ENST00000438412 TCEANC2Q96MN5 208 aa15.37■□□□□ 0.05
HCG18-236ENST00000438412 AFDNP55196 1824 aaKnown RBP15.37■□□□□ 0.05
HCG18-236ENST00000438412 A0A0D9SFI3 127 aa15.37■□□□□ 0.05
HCG18-236ENST00000438412 AK2P54819 239 aa15.37■□□□□ 0.05
HCG18-236ENST00000438412 ZBTB3Q9H5J0 574 aa15.37■□□□□ 0.05
HCG18-236ENST00000438412 RRAGDQ9NQL2 400 aaPredicted RBP15.37■□□□□ 0.05
HCG18-236ENST00000438412 CHMP3Q9Y3E7 222 aa15.37■□□□□ 0.05
HCG18-236ENST00000438412 TTC41PQ6P2S7 1318 aa15.37■□□□□ 0.05
HCG18-236ENST00000438412 USP42Q9H9J4 1324 aaKnown RBP15.37■□□□□ 0.05
HCG18-236ENST00000438412 DCCP43146 1447 aa15.36■□□□□ 0.05
HCG18-236ENST00000438412 A0A087WZG4 1122 aa15.36■□□□□ 0.05
HCG18-236ENST00000438412 EIF5BO60841 1220 aaKnown RBP15.36■□□□□ 0.05
HCG18-236ENST00000438412 CASTP20810 708 aaKnown RBP15.36■□□□□ 0.05
HCG18-236ENST00000438412 NMIQ13287 307 aaPredicted RBP15.36■□□□□ 0.05
HCG18-236ENST00000438412 TFCP2Q12800 502 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms