RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 PDZRN3Q9UPQ7 1066 aa17.02■□□□□ 0.31
HLA-DPA1-243ENST00000437811 UBTFL1P0CB47 393 aaPredicted RBP17.01■□□□□ 0.31
HLA-DPA1-243ENST00000437811 CYP19A1P11511 503 aaPredicted RBP17.01■□□□□ 0.31
HLA-DPA1-243ENST00000437811 BTAF1O14981 1849 aa17.01■□□□□ 0.31
HLA-DPA1-243ENST00000437811 SBF2Q86WG5 1849 aa17.01■□□□□ 0.31
HLA-DPA1-243ENST00000437811 AFDNP55196 1824 aaKnown RBP17■□□□□ 0.31
HLA-DPA1-243ENST00000437811 NEXNQ0ZGT2 675 aa17■□□□□ 0.31
HLA-DPA1-243ENST00000437811 GCC1Q96CN9 775 aa17■□□□□ 0.31
HLA-DPA1-243ENST00000437811 COL5A3P25940 1745 aaPredicted RBP16.99■□□□□ 0.31
HLA-DPA1-243ENST00000437811 LOC102724428A0A0B4J2F2 783 aa16.99■□□□□ 0.31
HLA-DPA1-243ENST00000437811 IGKV5-2P06315 115 aa16.99■□□□□ 0.31
HLA-DPA1-243ENST00000437811 SIK1P57059 783 aa16.99■□□□□ 0.31
HLA-DPA1-243ENST00000437811 CWF19L2Q2TBE0 894 aaKnown RBP16.99■□□□□ 0.31
HLA-DPA1-243ENST00000437811 ZNF772Q68DY9 489 aaPredicted RBP16.99■□□□□ 0.31
HLA-DPA1-243ENST00000437811 TTLL7Q6ZT98 887 aa16.99■□□□□ 0.31
HLA-DPA1-243ENST00000437811 MYD88Q99836 296 aa16.99■□□□□ 0.31
HLA-DPA1-243ENST00000437811 LRRFIP2Q9Y608 721 aaKnown RBP16.99■□□□□ 0.31
HLA-DPA1-243ENST00000437811 BRWD3Q6RI45 1802 aa16.98■□□□□ 0.31
HLA-DPA1-243ENST00000437811 HMMRO75330 724 aa16.98■□□□□ 0.31
HLA-DPA1-243ENST00000437811 UTYO14607 1347 aa16.97■□□□□ 0.31
HLA-DPA1-243ENST00000437811 NEURL1BA8MQ27 555 aa16.97■□□□□ 0.31
HLA-DPA1-243ENST00000437811 NBPF7P0C2Y1 421 aaPredicted RBP16.97■□□□□ 0.31
HLA-DPA1-243ENST00000437811 ATP6V1AP38606 617 aa16.96■□□□□ 0.31
HLA-DPA1-243ENST00000437811 RGS3P49796 1198 aa16.96■□□□□ 0.31
HLA-DPA1-243ENST00000437811 ATP8B2P98198 1209 aa16.96■□□□□ 0.31
HLA-DPA1-243ENST00000437811 NUCB1Q02818 461 aa16.96■□□□□ 0.31
HLA-DPA1-243ENST00000437811 FBXO41Q8TF61 875 aa16.96■□□□□ 0.31
HLA-DPA1-243ENST00000437811 DCTPP1Q9H773 170 aa16.96■□□□□ 0.31
HLA-DPA1-243ENST00000437811 TSHZ2Q9NRE2 1034 aa16.96■□□□□ 0.31
HLA-DPA1-243ENST00000437811 C9orf78Q9NZ63 289 aaPredicted RBP16.96■□□□□ 0.31
HLA-DPA1-243ENST00000437811 HDAC5Q9UQL6 1122 aa16.96■□□□□ 0.31
HLA-DPA1-243ENST00000437811 ZBTB1Q9Y2K1 713 aa16.96■□□□□ 0.31
HLA-DPA1-243ENST00000437811 GRM8O00222 908 aa16.95■□□□□ 0.3
HLA-DPA1-243ENST00000437811 ITPK1Q13572 414 aa16.95■□□□□ 0.3
HLA-DPA1-243ENST00000437811 FAM182BQ5T319 152 aa16.95■□□□□ 0.3
HLA-DPA1-243ENST00000437811 LY75O60449 1722 aa16.94■□□□□ 0.3
HLA-DPA1-243ENST00000437811 IL6STP40189 918 aaPredicted RBP16.94■□□□□ 0.3
HLA-DPA1-243ENST00000437811 RBM6P78332 1123 aaKnown RBP16.94■□□□□ 0.3
HLA-DPA1-243ENST00000437811 GCKRQ14397 625 aa16.94■□□□□ 0.3
HLA-DPA1-243ENST00000437811 KIF6Q6ZMV9 814 aa16.94■□□□□ 0.3
HLA-DPA1-243ENST00000437811 PTF1AQ7RTS3 328 aa16.94■□□□□ 0.3
HLA-DPA1-243ENST00000437811 ZBTB3Q9H5J0 574 aa16.94■□□□□ 0.3
HLA-DPA1-243ENST00000437811 CCDC87Q9NVE4 849 aa16.94■□□□□ 0.3
HLA-DPA1-243ENST00000437811 ZNF330Q9Y3S2 320 aaPredicted RBP16.93■□□□□ 0.3
HLA-DPA1-243ENST00000437811 ANKRD36CQ5JPF3 1778 aa16.92■□□□□ 0.3
HLA-DPA1-243ENST00000437811 CRKLP46109 303 aaKnown RBP16.92■□□□□ 0.3
HLA-DPA1-243ENST00000437811 INTS5Q6P9B9 1019 aaKnown RBP16.92■□□□□ 0.3
HLA-DPA1-243ENST00000437811 KRT27Q7Z3Y8 459 aa16.92■□□□□ 0.3
HLA-DPA1-243ENST00000437811 CHD1LQ86WJ1 897 aa16.92■□□□□ 0.3
HLA-DPA1-243ENST00000437811 MAP3K15Q6ZN16 1313 aa16.92■□□□□ 0.3
HLA-DPA1-243ENST00000437811 PNMA6EA0A0J9YXQ4 647 aa16.91■□□□□ 0.3
HLA-DPA1-243ENST00000437811 ATP5J2-PTCD1G3V325 749 aa16.91■□□□□ 0.3
HLA-DPA1-243ENST00000437811 PDE4AP27815 886 aa16.91■□□□□ 0.3
HLA-DPA1-243ENST00000437811 MTX1Q13505 466 aa16.91■□□□□ 0.3
HLA-DPA1-243ENST00000437811 SSH3Q8TE77 659 aa16.91■□□□□ 0.3
HLA-DPA1-243ENST00000437811 COL15A1P39059 1388 aa16.91■□□□□ 0.3
HLA-DPA1-243ENST00000437811 MYH14Q7Z406 1995 aaKnown RBP16.91■□□□□ 0.3
HLA-DPA1-243ENST00000437811 EIF5P55010 431 aaKnown RBP16.9■□□□□ 0.3
HLA-DPA1-243ENST00000437811 POLA2Q14181 598 aa16.9■□□□□ 0.3
HLA-DPA1-243ENST00000437811 ANKRD45Q5TZF3 282 aa16.9■□□□□ 0.3
HLA-DPA1-243ENST00000437811 SUCLG2Q96I99 432 aa16.9■□□□□ 0.3
HLA-DPA1-243ENST00000437811 ISCA1Q9BUE6 129 aa16.9■□□□□ 0.3
HLA-DPA1-243ENST00000437811 TCIRG1Q13488 830 aa16.89■□□□□ 0.3
HLA-DPA1-243ENST00000437811 FAM196AQ6ZSG2 479 aa16.89■□□□□ 0.3
HLA-DPA1-243ENST00000437811 PPP1R42Q7Z4L9 355 aa16.89■□□□□ 0.3
HLA-DPA1-243ENST00000437811 LNPKQ9C0E8 428 aa16.89■□□□□ 0.3
HLA-DPA1-243ENST00000437811 BCL11BQ9C0K0 894 aaPredicted RBP16.89■□□□□ 0.3
HLA-DPA1-243ENST00000437811 CWC25Q9NXE8 425 aaPredicted RBP16.89■□□□□ 0.3
HLA-DPA1-243ENST00000437811 GIGYF2Q6Y7W6 1299 aaKnown RBP16.89■□□□□ 0.29
HLA-DPA1-243ENST00000437811 CCDC191Q8NCU4 936 aa16.89■□□□□ 0.29
HLA-DPA1-243ENST00000437811 LINC00116Q8NCU8 138 aa16.89■□□□□ 0.29
HLA-DPA1-243ENST00000437811 KAZALD1Q96I82 304 aa16.89■□□□□ 0.29
HLA-DPA1-243ENST00000437811 CNTNAP4Q9C0A0 1308 aa16.88■□□□□ 0.29
HLA-DPA1-243ENST00000437811 A0A087WZG4 1122 aa16.88■□□□□ 0.29
HLA-DPA1-243ENST00000437811 ERVV-1B6SEH8 477 aa16.88■□□□□ 0.29
HLA-DPA1-243ENST00000437811 SRGAP3O43295 1099 aa16.88■□□□□ 0.29
HLA-DPA1-243ENST00000437811 CASP7P55210 303 aa16.88■□□□□ 0.29
HLA-DPA1-243ENST00000437811 TRIM28Q13263 835 aaKnown RBP16.88■□□□□ 0.29
HLA-DPA1-243ENST00000437811 HSP90AB3PQ58FF7 597 aa16.88■□□□□ 0.29
HLA-DPA1-243ENST00000437811 NPM2Q86SE8 214 aaKnown RBP16.88■□□□□ 0.29
HLA-DPA1-243ENST00000437811 DZIP3Q86Y13 1208 aaKnown RBP16.88■□□□□ 0.29
HLA-DPA1-243ENST00000437811 NUP98P52948 1817 aa16.88■□□□□ 0.29
HLA-DPA1-243ENST00000437811 TAF1LQ8IZX4 1826 aa16.88■□□□□ 0.29
HLA-DPA1-243ENST00000437811 BCORQ6W2J9 1755 aa16.87■□□□□ 0.29
HLA-DPA1-243ENST00000437811 H7C1W4 665 aa16.87■□□□□ 0.29
HLA-DPA1-243ENST00000437811 UBE3BQ7Z3V4 1068 aa16.87■□□□□ 0.29
HLA-DPA1-243ENST00000437811 BICC1Q9H694 974 aaKnown RBP16.87■□□□□ 0.29
HLA-DPA1-243ENST00000437811 HLFQ16534 295 aa16.86■□□□□ 0.29
HLA-DPA1-243ENST00000437811 ARXQ96QS3 562 aa16.86■□□□□ 0.29
HLA-DPA1-243ENST00000437811 ZBTB47Q9UFB7 747 aaPredicted RBP16.86■□□□□ 0.29
HLA-DPA1-243ENST00000437811 CCNL1Q9UK58 526 aaPredicted RBP16.86■□□□□ 0.29
HLA-DPA1-243ENST00000437811 EXOC6BQ9Y2D4 811 aa16.86■□□□□ 0.29
HLA-DPA1-243ENST00000437811 RXRBP28702 533 aa16.85■□□□□ 0.29
HLA-DPA1-243ENST00000437811 RC3H1Q5TC82 1133 aaKnown RBP16.85■□□□□ 0.29
HLA-DPA1-243ENST00000437811 TBC1D2BQ9UPU7 963 aa16.85■□□□□ 0.29
HLA-DPA1-243ENST00000437811 SCN7AQ01118 1682 aa16.84■□□□□ 0.29
HLA-DPA1-243ENST00000437811 RABL6Q3YEC7 729 aaPredicted RBP16.84■□□□□ 0.29
HLA-DPA1-243ENST00000437811 EPHA10Q5JZY3 1008 aa16.84■□□□□ 0.29
HLA-DPA1-243ENST00000437811 JARID2Q92833 1246 aaPredicted RBP16.84■□□□□ 0.29
HLA-DPA1-243ENST00000437811 C4BP0C0L5 1744 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms