RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 MASTLQ96GX5 879 aa19.04■□□□□ 0.64
LINC01088-201ENST00000437737 ZNF496Q96IT1 587 aaPredicted RBP19.04■□□□□ 0.64
LINC01088-201ENST00000437737 TEX13AQ9BXU3 409 aaPredicted RBP19.04■□□□□ 0.64
LINC01088-201ENST00000437737 TAF1DQ9H5J8 278 aaPredicted RBP19.04■□□□□ 0.64
LINC01088-201ENST00000437737 HEG1Q9ULI3 1381 aa19.04■□□□□ 0.64
LINC01088-201ENST00000437737 BCORQ6W2J9 1755 aa19.04■□□□□ 0.64
LINC01088-201ENST00000437737 SRGNP10124 158 aa19.03■□□□□ 0.64
LINC01088-201ENST00000437737 IL6STP40189 918 aaPredicted RBP19.03■□□□□ 0.64
LINC01088-201ENST00000437737 TEFQ10587 303 aa19.03■□□□□ 0.64
LINC01088-201ENST00000437737 L3MBTL3Q96JM7 780 aaPredicted RBP19.03■□□□□ 0.64
LINC01088-201ENST00000437737 LBX1P52954 281 aa19.02■□□□□ 0.64
LINC01088-201ENST00000437737 CLEC11AQ9Y240 323 aa19.02■□□□□ 0.64
LINC01088-201ENST00000437737 SIPA1L3O60292 1781 aaPredicted RBP19.01■□□□□ 0.63
LINC01088-201ENST00000437737 CCDC93Q567U6 631 aa19.01■□□□□ 0.63
LINC01088-201ENST00000437737 ZNF790Q6PG37 636 aa19.01■□□□□ 0.63
LINC01088-201ENST00000437737 DIAPH1O60610 1272 aaKnown RBP19■□□□□ 0.63
LINC01088-201ENST00000437737 CAMTA2O94983 1202 aa19■□□□□ 0.63
LINC01088-201ENST00000437737 WBP1LQ9NX94 342 aa19■□□□□ 0.63
LINC01088-201ENST00000437737 ITGBL1O95965 494 aaPredicted RBP18.99■□□□□ 0.63
LINC01088-201ENST00000437737 A1BGP04217 495 aa18.99■□□□□ 0.63
LINC01088-201ENST00000437737 HACL1Q9UJ83 578 aa18.99■□□□□ 0.63
LINC01088-201ENST00000437737 ZNF541Q9H0D2 1346 aa18.99■□□□□ 0.63
LINC01088-201ENST00000437737 DZIP3Q86Y13 1208 aaKnown RBP18.98■□□□□ 0.63
LINC01088-201ENST00000437737 FMNL2Q96PY5 1086 aa18.98■□□□□ 0.63
LINC01088-201ENST00000437737 ADAMTSL1Q8N6G6 1762 aa18.98■□□□□ 0.63
LINC01088-201ENST00000437737 EPHX2P34913 555 aa18.97■□□□□ 0.63
LINC01088-201ENST00000437737 FKBP4Q02790 459 aaKnown RBP eCLIP18.97■□□□□ 0.63
LINC01088-201ENST00000437737 DEFB115Q30KQ5 88 aa18.97■□□□□ 0.63
LINC01088-201ENST00000437737 AMER1Q5JTC6 1135 aaPredicted RBP18.97■□□□□ 0.63
LINC01088-201ENST00000437737 NBPF5PQ86XG9 351 aaPredicted RBP18.97■□□□□ 0.63
LINC01088-201ENST00000437737 ZNF277Q9NRM2 450 aaPredicted RBP18.97■□□□□ 0.63
LINC01088-201ENST00000437737 GNAT3A8MTJ3 354 aa18.96■□□□□ 0.63
LINC01088-201ENST00000437737 NPR1P16066 1061 aa18.96■□□□□ 0.63
LINC01088-201ENST00000437737 IL17REQ8NFR9 667 aa18.96■□□□□ 0.63
LINC01088-201ENST00000437737 GAS2L2Q8NHY3 880 aa18.96■□□□□ 0.63
LINC01088-201ENST00000437737 ABHD8Q96I13 439 aa18.96■□□□□ 0.63
LINC01088-201ENST00000437737 RNF123Q5XPI4 1314 aa18.96■□□□□ 0.63
LINC01088-201ENST00000437737 SLC34A2O95436 690 aa18.95■□□□□ 0.62
LINC01088-201ENST00000437737 HSPA8P11142 646 aaKnown RBP18.95■□□□□ 0.62
LINC01088-201ENST00000437737 FAM161AQ3B820 660 aa18.95■□□□□ 0.62
LINC01088-201ENST00000437737 MAP1SQ66K74 1059 aaPredicted RBP18.95■□□□□ 0.62
LINC01088-201ENST00000437737 PNMA8AQ86V59 439 aaPredicted RBP18.95■□□□□ 0.62
LINC01088-201ENST00000437737 C7orf43Q8WVR3 580 aa18.95■□□□□ 0.62
LINC01088-201ENST00000437737 ABT1Q9ULW3 272 aaKnown RBP18.95■□□□□ 0.62
LINC01088-201ENST00000437737 RASSF10A6NK89 507 aa18.94■□□□□ 0.62
LINC01088-201ENST00000437737 MAP2K1Q02750 393 aaPredicted RBP18.94■□□□□ 0.62
LINC01088-201ENST00000437737 CNTROBQ8N137 903 aa18.94■□□□□ 0.62
LINC01088-201ENST00000437737 ZNF652Q9Y2D9 606 aa18.94■□□□□ 0.62
LINC01088-201ENST00000437737 WDR33Q9C0J8 1336 aaKnown RBP18.94■□□□□ 0.62
LINC01088-201ENST00000437737 U2SURPO15042 1029 aaKnown RBP18.93■□□□□ 0.62
LINC01088-201ENST00000437737 PIP4K2AP48426 406 aaPredicted RBP18.93■□□□□ 0.62
LINC01088-201ENST00000437737 RTKN2Q8IZC4 609 aa18.93■□□□□ 0.62
LINC01088-201ENST00000437737 BTBD11A6QL63 1104 aa18.92■□□□□ 0.62
LINC01088-201ENST00000437737 OLFM4Q6UX06 510 aa18.92■□□□□ 0.62
LINC01088-201ENST00000437737 KCNQ3O43525 872 aa18.91■□□□□ 0.62
LINC01088-201ENST00000437737 IARSP41252 1262 aaKnown RBP18.91■□□□□ 0.62
LINC01088-201ENST00000437737 CLEC4GQ6UXB4 293 aa18.91■□□□□ 0.62
LINC01088-201ENST00000437737 TPTE2Q6XPS3 522 aa18.91■□□□□ 0.62
LINC01088-201ENST00000437737 PAXIP1Q6ZW49 1069 aaPredicted RBP18.91■□□□□ 0.62
LINC01088-201ENST00000437737 FAM177BA6PVY3 158 aa18.9■□□□□ 0.62
LINC01088-201ENST00000437737 CC2D1BQ5T0F9 858 aaKnown RBP18.9■□□□□ 0.62
LINC01088-201ENST00000437737 GPC2Q8N158 579 aa18.9■□□□□ 0.62
LINC01088-201ENST00000437737 SYNE4Q8N205 404 aa18.9■□□□□ 0.62
LINC01088-201ENST00000437737 USP16Q9Y5T5 823 aa18.9■□□□□ 0.62
LINC01088-201ENST00000437737 FZD9O00144 591 aa18.89■□□□□ 0.61
LINC01088-201ENST00000437737 JDP2Q8WYK2 163 aa18.89■□□□□ 0.61
LINC01088-201ENST00000437737 BEGAINQ9BUH8 593 aa18.89■□□□□ 0.61
LINC01088-201ENST00000437737 NIP7Q9Y221 180 aaKnown RBP eCLIP18.89■□□□□ 0.61
LINC01088-201ENST00000437737 KLRG2A4D1S0 409 aaPredicted RBP18.88■□□□□ 0.61
LINC01088-201ENST00000437737 CCDC85CA6NKD9 419 aa18.88■□□□□ 0.61
LINC01088-201ENST00000437737 ALDH1B1P30837 517 aa18.88■□□□□ 0.61
LINC01088-201ENST00000437737 GRM1Q13255 1194 aa18.88■□□□□ 0.61
LINC01088-201ENST00000437737 DDX21Q9NR30 783 aaKnown RBP eCLIP18.88■□□□□ 0.61
LINC01088-201ENST00000437737 GJA3Q9Y6H8 435 aa18.88■□□□□ 0.61
LINC01088-201ENST00000437737 CEMIPQ8WUJ3 1361 aa18.88■□□□□ 0.61
LINC01088-201ENST00000437737 COL3A1P02461 1466 aaPredicted RBP18.88■□□□□ 0.61
LINC01088-201ENST00000437737 THSD7BQ9C0I4 1608 aa18.88■□□□□ 0.61
LINC01088-201ENST00000437737 GTF2E1P29083 439 aaPredicted RBP18.87■□□□□ 0.61
LINC01088-201ENST00000437737 LMOD1P29536 600 aaPredicted RBP18.87■□□□□ 0.61
LINC01088-201ENST00000437737 TRPM7Q96QT4 1865 aa18.86■□□□□ 0.61
LINC01088-201ENST00000437737 PRAMEF22A3QJZ6 481 aa18.86■□□□□ 0.61
LINC01088-201ENST00000437737 ECE1P42892 770 aa18.86■□□□□ 0.61
LINC01088-201ENST00000437737 EIF6P56537 245 aaKnown RBP18.86■□□□□ 0.61
LINC01088-201ENST00000437737 MLLT1Q03111 559 aaPredicted RBP18.85■□□□□ 0.61
LINC01088-201ENST00000437737 CNGB1Q14028 1251 aaPredicted RBP18.85■□□□□ 0.61
LINC01088-201ENST00000437737 CAPNS2Q96L46 248 aa18.85■□□□□ 0.61
LINC01088-201ENST00000437737 LTBP1Q14766 1721 aa18.85■□□□□ 0.61
LINC01088-201ENST00000437737 SNRPA1P09661 255 aaKnown RBP18.84■□□□□ 0.61
LINC01088-201ENST00000437737 PSMD1Q99460 953 aa18.84■□□□□ 0.61
LINC01088-201ENST00000437737 KIF7Q2M1P5 1343 aa18.83■□□□□ 0.61
LINC01088-201ENST00000437737 CYP4F22Q6NT55 531 aa18.83■□□□□ 0.6
LINC01088-201ENST00000437737 RGL2O15211 777 aa18.82■□□□□ 0.6
LINC01088-201ENST00000437737 PRKAR2BP31323 418 aa18.82■□□□□ 0.6
LINC01088-201ENST00000437737 FMR1Q06787 632 aaKnown RBP eCLIP18.82■□□□□ 0.6
LINC01088-201ENST00000437737 GPR101Q96P66 508 aaPredicted RBP18.82■□□□□ 0.6
LINC01088-201ENST00000437737 COL4A5P29400 1685 aa18.82■□□□□ 0.6
LINC01088-201ENST00000437737 CC2D2BQ6DHV5 1058 aa18.81■□□□□ 0.6
LINC01088-201ENST00000437737 PHACTR3Q96KR7 559 aa18.81■□□□□ 0.6
LINC01088-201ENST00000437737 SNED1Q8TER0 1413 aa18.81■□□□□ 0.6
LINC01088-201ENST00000437737 NBPF26B4DH59 902 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms