RNA–Protein interactions for RNA: ENST00000437167.1

RGPD6-203, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 1 (best)

Gene RGPD6, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-203ENST00000437167 RHPN1Q8TCX5 695 aa9.5□□□□□ -0.89
RGPD6-203ENST00000437167 MKRN1Q9UHC7 482 aaKnown RBP9.5□□□□□ -0.89
RGPD6-203ENST00000437167 KLF15Q9UIH9 416 aa9.5□□□□□ -0.89
RGPD6-203ENST00000437167 ZNF777Q9ULD5 760 aaPredicted RBP9.5□□□□□ -0.89
RGPD6-203ENST00000437167 ATP9BO43861 1147 aa9.49□□□□□ -0.89
RGPD6-203ENST00000437167 EPHA4P54764 986 aa9.49□□□□□ -0.89
RGPD6-203ENST00000437167 CLDN10P78369 228 aa9.49□□□□□ -0.89
RGPD6-203ENST00000437167 SH3PXD2AQ5TCZ1 1133 aa9.49□□□□□ -0.89
RGPD6-203ENST00000437167 SAMD5Q5TGI4 173 aa9.49□□□□□ -0.89
RGPD6-203ENST00000437167 ALYREFQ86V81 257 aaKnown RBP9.49□□□□□ -0.89
RGPD6-203ENST00000437167 PLEKHM2Q8IWE5 1019 aa9.49□□□□□ -0.89
RGPD6-203ENST00000437167 OGFOD1Q8N543 542 aa9.49□□□□□ -0.89
RGPD6-203ENST00000437167 ZNF594Q96JF6 807 aaPredicted RBP9.49□□□□□ -0.89
RGPD6-203ENST00000437167 UCN2Q96RP3 112 aa9.49□□□□□ -0.89
RGPD6-203ENST00000437167 AVENQ9NQS1 362 aaPredicted RBP9.49□□□□□ -0.89
RGPD6-203ENST00000437167 ZBTB7BO15156 539 aaPredicted RBP9.48□□□□□ -0.89
RGPD6-203ENST00000437167 PROCP04070 461 aa9.48□□□□□ -0.89
RGPD6-203ENST00000437167 HOXB4P17483 251 aaPredicted RBP9.48□□□□□ -0.89
RGPD6-203ENST00000437167 ZNF468Q5VIY5 522 aaPredicted RBP9.48□□□□□ -0.89
RGPD6-203ENST00000437167 GLMNQ92990 594 aa9.48□□□□□ -0.89
RGPD6-203ENST00000437167 TSPAN10Q9H1Z9 355 aaPredicted RBP9.48□□□□□ -0.89
RGPD6-203ENST00000437167 HCN4Q9Y3Q4 1203 aa9.48□□□□□ -0.89
RGPD6-203ENST00000437167 EML1O00423 815 aa9.47□□□□□ -0.89
RGPD6-203ENST00000437167 DGKGP49619 791 aa9.47□□□□□ -0.89
RGPD6-203ENST00000437167 LAMC2Q13753 1193 aa9.47□□□□□ -0.89
RGPD6-203ENST00000437167 NOP53Q9NZM5 478 aaKnown RBP9.47□□□□□ -0.89
RGPD6-203ENST00000437167 PALM3A6NDB9 673 aaPredicted RBP9.46□□□□□ -0.9
RGPD6-203ENST00000437167 EFSO43281 561 aa9.46□□□□□ -0.9
RGPD6-203ENST00000437167 ALAS2P22557 587 aa9.46□□□□□ -0.9
RGPD6-203ENST00000437167 PSMA6P60900 246 aaKnown RBP9.46□□□□□ -0.9
RGPD6-203ENST00000437167 SYT9Q86SS6 491 aa9.46□□□□□ -0.9
RGPD6-203ENST00000437167 LARGE2Q8N3Y3 721 aa9.46□□□□□ -0.9
RGPD6-203ENST00000437167 SFI1A8K8P3 1242 aa9.45□□□□□ -0.9
RGPD6-203ENST00000437167 TSEN2Q8NCE0 465 aaKnown RBP9.45□□□□□ -0.9
RGPD6-203ENST00000437167 PPP1R12BO60237 982 aaPredicted RBP9.44□□□□□ -0.9
RGPD6-203ENST00000437167 ADAM23O75077 832 aa9.44□□□□□ -0.9
RGPD6-203ENST00000437167 RASA1P20936 1047 aa9.44□□□□□ -0.9
RGPD6-203ENST00000437167 SFSWAPQ12872 951 aaKnown RBP9.44□□□□□ -0.9
RGPD6-203ENST00000437167 HSH2DQ96JZ2 352 aa9.44□□□□□ -0.9
RGPD6-203ENST00000437167 CALR3Q96L12 384 aaKnown RBP9.44□□□□□ -0.9
RGPD6-203ENST00000437167 CEP63Q96MT8 703 aa9.44□□□□□ -0.9
RGPD6-203ENST00000437167 PHACTR1Q9C0D0 580 aa9.44□□□□□ -0.9
RGPD6-203ENST00000437167 BAG6P46379 1132 aa9.43□□□□□ -0.9
RGPD6-203ENST00000437167 CHMP7Q8WUX9 453 aaPredicted RBP9.43□□□□□ -0.9
RGPD6-203ENST00000437167 ANKIB1Q9P2G1 1089 aa9.43□□□□□ -0.9
RGPD6-203ENST00000437167 TFIP11Q9UBB9 837 aaKnown RBP9.43□□□□□ -0.9
RGPD6-203ENST00000437167 GPC6Q9Y625 555 aaPredicted RBP9.43□□□□□ -0.9
RGPD6-203ENST00000437167 ELOA3CA0A087WX78 387 aaPredicted RBP9.42□□□□□ -0.9
RGPD6-203ENST00000437167 ELOA3DA6NLF2 546 aaPredicted RBP9.42□□□□□ -0.9
RGPD6-203ENST00000437167 C1QTNF9BB2RNN3 333 aa9.42□□□□□ -0.9
RGPD6-203ENST00000437167 ELOA3BQ3SY89 546 aa9.42□□□□□ -0.9
RGPD6-203ENST00000437167 ELOA3Q8NG57 546 aa9.42□□□□□ -0.9
RGPD6-203ENST00000437167 FURINP09958 794 aa9.41□□□□□ -0.9
RGPD6-203ENST00000437167 NEUROD1Q13562 356 aa9.41□□□□□ -0.9
RGPD6-203ENST00000437167 RAB44Q7Z6P3 723 aaPredicted RBP9.41□□□□□ -0.9
RGPD6-203ENST00000437167 NGLY1Q96IV0 654 aa9.41□□□□□ -0.9
RGPD6-203ENST00000437167 SLC30A3Q99726 388 aa9.41□□□□□ -0.9
RGPD6-203ENST00000437167 PLVAPQ9BX97 442 aa9.41□□□□□ -0.9
RGPD6-203ENST00000437167 BRD7Q9NPI1 651 aa9.41□□□□□ -0.9
RGPD6-203ENST00000437167 K7ELQ4 463 aaPredicted RBP9.4□□□□□ -0.9
RGPD6-203ENST00000437167 M0R2N6 131 aa9.4□□□□□ -0.9
RGPD6-203ENST00000437167 SPEM2Q0P670 501 aa9.4□□□□□ -0.9
RGPD6-203ENST00000437167 C1orf53Q5VUE5 145 aa9.4□□□□□ -0.9
RGPD6-203ENST00000437167 SIX5Q8N196 739 aa9.4□□□□□ -0.9
RGPD6-203ENST00000437167 C1orf115Q9H7X2 142 aa9.4□□□□□ -0.9
RGPD6-203ENST00000437167 SIN3BO75182 1162 aa9.39□□□□□ -0.91
RGPD6-203ENST00000437167 LARP1Q6PKG0 1096 aaKnown RBP9.39□□□□□ -0.91
RGPD6-203ENST00000437167 CD163Q86VB7 1156 aa9.39□□□□□ -0.91
RGPD6-203ENST00000437167 C7orf43Q8WVR3 580 aa9.39□□□□□ -0.91
RGPD6-203ENST00000437167 SCG3Q8WXD2 468 aaKnown RBP9.39□□□□□ -0.91
RGPD6-203ENST00000437167 HINFPQ9BQA5 517 aa9.39□□□□□ -0.91
RGPD6-203ENST00000437167 PPP1R12CQ9BZL4 782 aa9.39□□□□□ -0.91
RGPD6-203ENST00000437167 ATAD2Q6PL18 1390 aa9.38□□□□□ -0.91
RGPD6-203ENST00000437167 ARID3CA6NKF2 412 aa9.38□□□□□ -0.91
RGPD6-203ENST00000437167 CHRNA4P43681 627 aa9.38□□□□□ -0.91
RGPD6-203ENST00000437167 SEC13P55735 322 aa9.38□□□□□ -0.91
RGPD6-203ENST00000437167 ZNF280CQ8ND82 737 aa9.38□□□□□ -0.91
RGPD6-203ENST00000437167 TRIM11Q96F44 468 aa9.38□□□□□ -0.91
RGPD6-203ENST00000437167 SUSD3Q96L08 255 aa9.38□□□□□ -0.91
RGPD6-203ENST00000437167 KCNH4Q9UQ05 1017 aa9.38□□□□□ -0.91
RGPD6-203ENST00000437167 MAFBQ9Y5Q3 323 aaPredicted RBP9.38□□□□□ -0.91
RGPD6-203ENST00000437167 LGR5O75473 907 aa9.37□□□□□ -0.91
RGPD6-203ENST00000437167 TBC1D8BQ0IIM8 1120 aa9.37□□□□□ -0.91
RGPD6-203ENST00000437167 ALDH16A1Q8IZ83 802 aa9.37□□□□□ -0.91
RGPD6-203ENST00000437167 SPDYE3A6NKU9 549 aa9.36□□□□□ -0.91
RGPD6-203ENST00000437167 HIRAP54198 1017 aaPredicted RBP9.36□□□□□ -0.91
RGPD6-203ENST00000437167 BHMTQ93088 406 aa9.36□□□□□ -0.91
RGPD6-203ENST00000437167 IGFLR1Q9H665 355 aa9.36□□□□□ -0.91
RGPD6-203ENST00000437167 M0R082 166 aa9.35□□□□□ -0.91
RGPD6-203ENST00000437167 C21orf2O43822 256 aa9.35□□□□□ -0.91
RGPD6-203ENST00000437167 TYRO3Q06418 890 aa9.35□□□□□ -0.91
RGPD6-203ENST00000437167 PRRT3Q5FWE3 981 aa9.35□□□□□ -0.91
RGPD6-203ENST00000437167 ZNF417Q8TAU3 575 aa9.35□□□□□ -0.91
RGPD6-203ENST00000437167 ZNF587Q96SQ5 575 aaPredicted RBP9.35□□□□□ -0.91
RGPD6-203ENST00000437167 ADARB2-AS1A8MUL3 147 aa9.34□□□□□ -0.91
RGPD6-203ENST00000437167 SPATA31C1P0DKV0 1188 aa9.34□□□□□ -0.91
RGPD6-203ENST00000437167 ADH7P40394 386 aa9.34□□□□□ -0.91
RGPD6-203ENST00000437167 CFAP70Q5T0N1 1121 aa9.34□□□□□ -0.91
RGPD6-203ENST00000437167 DKK1O94907 266 aa9.33□□□□□ -0.92
RGPD6-203ENST00000437167 DPYDQ12882 1025 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms