RNA–Protein interactions for RNA: ENST00000437124.6

DDR1-237, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-237ENST00000437124 TMEM88BA6NKF7 163 aa20.21■□□□□ 0.83
DDR1-237ENST00000437124 SLC34A2O95436 690 aa20.21■□□□□ 0.83
DDR1-237ENST00000437124 ITGBL1O95965 494 aaPredicted RBP20.21■□□□□ 0.83
DDR1-237ENST00000437124 VEGFBP49765 207 aa20.21■□□□□ 0.83
DDR1-237ENST00000437124 CNBD1Q8NA66 436 aa20.21■□□□□ 0.83
DDR1-237ENST00000437124 IL17REQ8NFR9 667 aa20.21■□□□□ 0.83
DDR1-237ENST00000437124 WBP1LQ9NX94 342 aa20.21■□□□□ 0.83
DDR1-237ENST00000437124 GNAT3A8MTJ3 354 aa20.2■□□□□ 0.82
DDR1-237ENST00000437124 ARFGEF2Q9Y6D5 1785 aa20.2■□□□□ 0.82
DDR1-237ENST00000437124 HEG1Q9ULI3 1381 aa20.2■□□□□ 0.82
DDR1-237ENST00000437124 CCDC24Q8N4L8 307 aa20.19■□□□□ 0.82
DDR1-237ENST00000437124 C7orf43Q8WVR3 580 aa20.19■□□□□ 0.82
DDR1-237ENST00000437124 MASTLQ96GX5 879 aa20.19■□□□□ 0.82
DDR1-237ENST00000437124 ZNF496Q96IT1 587 aaPredicted RBP20.19■□□□□ 0.82
DDR1-237ENST00000437124 CFAP53Q96M91 514 aa20.19■□□□□ 0.82
DDR1-237ENST00000437124 SETDB2Q96T68 719 aa20.19■□□□□ 0.82
DDR1-237ENST00000437124 TBC1D2BQ9UPU7 963 aa20.19■□□□□ 0.82
DDR1-237ENST00000437124 SLX4Q8IY92 1834 aa20.18■□□□□ 0.82
DDR1-237ENST00000437124 ST5P78524 1137 aa20.18■□□□□ 0.82
DDR1-237ENST00000437124 ZNF790Q6PG37 636 aa20.18■□□□□ 0.82
DDR1-237ENST00000437124 PHACTR3Q96KR7 559 aa20.18■□□□□ 0.82
DDR1-237ENST00000437124 PPP2R1AP30153 589 aa20.17■□□□□ 0.82
DDR1-237ENST00000437124 TEFQ10587 303 aa20.17■□□□□ 0.82
DDR1-237ENST00000437124 RSPH6AQ9H0K4 717 aa20.17■□□□□ 0.82
DDR1-237ENST00000437124 CAMTA2O94983 1202 aa20.16■□□□□ 0.82
DDR1-237ENST00000437124 PRKAR2BP31323 418 aa20.16■□□□□ 0.82
DDR1-237ENST00000437124 ADAMTSL1Q8N6G6 1762 aa20.16■□□□□ 0.82
DDR1-237ENST00000437124 RASSF10A6NK89 507 aa20.15■□□□□ 0.82
DDR1-237ENST00000437124 LBX1P52954 281 aa20.15■□□□□ 0.82
DDR1-237ENST00000437124 CCDC93Q567U6 631 aa20.15■□□□□ 0.82
DDR1-237ENST00000437124 NUDCQ9Y266 331 aa20.15■□□□□ 0.82
DDR1-237ENST00000437124 CEMIPQ8WUJ3 1361 aa20.15■□□□□ 0.82
DDR1-237ENST00000437124 SIPA1L3O60292 1781 aaPredicted RBP20.14■□□□□ 0.81
DDR1-237ENST00000437124 NPHP1O15259 732 aa20.14■□□□□ 0.81
DDR1-237ENST00000437124 NPM2Q86SE8 214 aaKnown RBP20.14■□□□□ 0.81
DDR1-237ENST00000437124 PNMA8AQ86V59 439 aaPredicted RBP20.14■□□□□ 0.81
DDR1-237ENST00000437124 HACL1Q9UJ83 578 aa20.14■□□□□ 0.81
DDR1-237ENST00000437124 ZNF330Q9Y3S2 320 aaPredicted RBP20.14■□□□□ 0.81
DDR1-237ENST00000437124 KLRG2A4D1S0 409 aaPredicted RBP20.13■□□□□ 0.81
DDR1-237ENST00000437124 FKBP4Q02790 459 aaKnown RBP eCLIP20.13■□□□□ 0.81
DDR1-237ENST00000437124 FMNL2Q96PY5 1086 aa20.13■□□□□ 0.81
DDR1-237ENST00000437124 ZNF541Q9H0D2 1346 aa20.12■□□□□ 0.81
DDR1-237ENST00000437124 U2AF1L5P0DN76 240 aaPredicted RBP20.12■□□□□ 0.81
DDR1-237ENST00000437124 NPR1P16066 1061 aa20.12■□□□□ 0.81
DDR1-237ENST00000437124 EPHX2P34913 555 aa20.12■□□□□ 0.81
DDR1-237ENST00000437124 U2AF1Q01081 240 aaKnown RBP eCLIP20.12■□□□□ 0.81
DDR1-237ENST00000437124 MAP2K1Q02750 393 aaPredicted RBP20.12■□□□□ 0.81
DDR1-237ENST00000437124 DEFB115Q30KQ5 88 aa20.12■□□□□ 0.81
DDR1-237ENST00000437124 EAPPQ56P03 285 aaPredicted RBP20.12■□□□□ 0.81
DDR1-237ENST00000437124 CLEC4GQ6UXB4 293 aa20.12■□□□□ 0.81
DDR1-237ENST00000437124 ABHD8Q96I13 439 aa20.12■□□□□ 0.81
DDR1-237ENST00000437124 BCORQ6W2J9 1755 aa20.12■□□□□ 0.81
DDR1-237ENST00000437124 CACNA1SQ13698 1873 aa20.11■□□□□ 0.81
DDR1-237ENST00000437124 A1BGP04217 495 aa20.11■□□□□ 0.81
DDR1-237ENST00000437124 HSPA8P11142 646 aaKnown RBP20.11■□□□□ 0.81
DDR1-237ENST00000437124 DZIP3Q86Y13 1208 aaKnown RBP20.1■□□□□ 0.81
DDR1-237ENST00000437124 RTKN2Q8IZC4 609 aa20.1■□□□□ 0.81
DDR1-237ENST00000437124 CNTROBQ8N137 903 aa20.1■□□□□ 0.81
DDR1-237ENST00000437124 BTBD11A6QL63 1104 aa20.09■□□□□ 0.81
DDR1-237ENST00000437124 FZD9O00144 591 aa20.09■□□□□ 0.81
DDR1-237ENST00000437124 RGL2O15211 777 aa20.09■□□□□ 0.81
DDR1-237ENST00000437124 KCNQ3O43525 872 aa20.09■□□□□ 0.81
DDR1-237ENST00000437124 NBPF5PQ86XG9 351 aaPredicted RBP20.09■□□□□ 0.81
DDR1-237ENST00000437124 ZNF277Q9NRM2 450 aaPredicted RBP20.09■□□□□ 0.81
DDR1-237ENST00000437124 CLEC11AQ9Y240 323 aa20.09■□□□□ 0.81
DDR1-237ENST00000437124 WDR33Q9C0J8 1336 aaKnown RBP20.08■□□□□ 0.81
DDR1-237ENST00000437124 GPC2Q8N158 579 aa20.08■□□□□ 0.81
DDR1-237ENST00000437124 FAM161AQ3B820 660 aa20.07■□□□□ 0.8
DDR1-237ENST00000437124 MAP1SQ66K74 1059 aaPredicted RBP20.07■□□□□ 0.8
DDR1-237ENST00000437124 ZNF652Q9Y2D9 606 aa20.07■□□□□ 0.8
DDR1-237ENST00000437124 RNF123Q5XPI4 1314 aa20.06■□□□□ 0.8
DDR1-237ENST00000437124 THSD7BQ9C0I4 1608 aa20.06■□□□□ 0.8
DDR1-237ENST00000437124 TPTE2Q6XPS3 522 aa20.06■□□□□ 0.8
DDR1-237ENST00000437124 IARSP41252 1262 aaKnown RBP20.05■□□□□ 0.8
DDR1-237ENST00000437124 MCM10Q7L590 875 aa20.05■□□□□ 0.8
DDR1-237ENST00000437124 RTF1Q92541 710 aaKnown RBP20.05■□□□□ 0.8
DDR1-237ENST00000437124 SNED1Q8TER0 1413 aa20.04■□□□□ 0.8
DDR1-237ENST00000437124 HTATSF1O43719 755 aaKnown RBP20.04■□□□□ 0.8
DDR1-237ENST00000437124 ALDH1B1P30837 517 aa20.04■□□□□ 0.8
DDR1-237ENST00000437124 RGS19P49795 217 aa20.04■□□□□ 0.8
DDR1-237ENST00000437124 DDX21Q9NR30 783 aaKnown RBP eCLIP20.04■□□□□ 0.8
DDR1-237ENST00000437124 ABT1Q9ULW3 272 aaKnown RBP20.04■□□□□ 0.8
DDR1-237ENST00000437124 USP16Q9Y5T5 823 aa20.04■□□□□ 0.8
DDR1-237ENST00000437124 OLFM4Q6UX06 510 aa20.03■□□□□ 0.8
DDR1-237ENST00000437124 PSMD1Q99460 953 aa20.03■□□□□ 0.8
DDR1-237ENST00000437124 DCTN1Q14203 1278 aa20.02■□□□□ 0.8
DDR1-237ENST00000437124 SYNE4Q8N205 404 aa20.02■□□□□ 0.8
DDR1-237ENST00000437124 ECE1P42892 770 aa20.01■□□□□ 0.79
DDR1-237ENST00000437124 MLLT1Q03111 559 aaPredicted RBP20.01■□□□□ 0.79
DDR1-237ENST00000437124 JDP2Q8WYK2 163 aa20.01■□□□□ 0.79
DDR1-237ENST00000437124 NIP7Q9Y221 180 aaKnown RBP eCLIP20.01■□□□□ 0.79
DDR1-237ENST00000437124 PRAMEF22A3QJZ6 481 aa20■□□□□ 0.79
DDR1-237ENST00000437124 SNRPA1P09661 255 aaKnown RBP20■□□□□ 0.79
DDR1-237ENST00000437124 CC2D2BQ6DHV5 1058 aa20■□□□□ 0.79
DDR1-237ENST00000437124 CAPNS2Q96L46 248 aa20■□□□□ 0.79
DDR1-237ENST00000437124 PIP4K2AP48426 406 aaPredicted RBP19.99■□□□□ 0.79
DDR1-237ENST00000437124 CRY2Q49AN0 593 aa19.99■□□□□ 0.79
DDR1-237ENST00000437124 BEGAINQ9BUH8 593 aa19.99■□□□□ 0.79
DDR1-237ENST00000437124 TAF7Q15545 349 aaPredicted RBP19.98■□□□□ 0.79
DDR1-237ENST00000437124 PCDH10Q9P2E7 1040 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms