RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 DICER1Q9UPY3 1922 aaKnown RBP14.32□□□□□ -0.12
HMGCL-204ENST00000436439 KDM3BQ7LBC6 1761 aa14.31□□□□□ -0.12
HMGCL-204ENST00000436439 PRR5LQ6MZQ0 368 aa14.31□□□□□ -0.12
HMGCL-204ENST00000436439 TTLL6Q8N841 843 aa14.31□□□□□ -0.12
HMGCL-204ENST00000436439 SLX4Q8IY92 1834 aa14.3□□□□□ -0.12
HMGCL-204ENST00000436439 H0YIN7 160 aa14.3□□□□□ -0.12
HMGCL-204ENST00000436439 CCDC146Q8IYE0 955 aa14.3□□□□□ -0.12
HMGCL-204ENST00000436439 NFKBIEO00221 500 aa14.29□□□□□ -0.12
HMGCL-204ENST00000436439 DZIP3Q86Y13 1208 aaKnown RBP14.29□□□□□ -0.12
HMGCL-204ENST00000436439 RTF1Q92541 710 aaKnown RBP14.29□□□□□ -0.12
HMGCL-204ENST00000436439 RRAGCQ9HB90 399 aa14.29□□□□□ -0.12
HMGCL-204ENST00000436439 ZNF521Q96K83 1311 aa14.29□□□□□ -0.12
HMGCL-204ENST00000436439 APAF1O14727 1248 aa14.28□□□□□ -0.12
HMGCL-204ENST00000436439 ZNF622Q969S3 477 aaKnown RBP eCLIP14.28□□□□□ -0.12
HMGCL-204ENST00000436439 BRIP1Q9BX63 1249 aa14.28□□□□□ -0.12
HMGCL-204ENST00000436439 KDM2BQ8NHM5 1336 aa14.28□□□□□ -0.12
HMGCL-204ENST00000436439 NBPF26B4DH59 902 aa14.27□□□□□ -0.12
HMGCL-204ENST00000436439 SNRPA1P09661 255 aaKnown RBP14.27□□□□□ -0.12
HMGCL-204ENST00000436439 LMNB1P20700 586 aa14.27□□□□□ -0.12
HMGCL-204ENST00000436439 CCDC27Q2M243 656 aa14.27□□□□□ -0.12
HMGCL-204ENST00000436439 NBPF10Q6P3W6 841 aaKnown RBP14.27□□□□□ -0.12
HMGCL-204ENST00000436439 NBPF15Q8N660 670 aa14.27□□□□□ -0.12
HMGCL-204ENST00000436439 RBM46Q8TBY0 533 aaKnown RBP14.27□□□□□ -0.12
HMGCL-204ENST00000436439 SETDB2Q96T68 719 aa14.27□□□□□ -0.12
HMGCL-204ENST00000436439 MIS18AQ9NYP9 233 aa14.27□□□□□ -0.12
HMGCL-204ENST00000436439 ZNF219Q9P2Y4 722 aaPredicted RBP14.27□□□□□ -0.12
HMGCL-204ENST00000436439 NUP98P52948 1817 aa14.27□□□□□ -0.13
HMGCL-204ENST00000436439 HTATSF1O43719 755 aaKnown RBP14.26□□□□□ -0.13
HMGCL-204ENST00000436439 PDE6BP35913 854 aa14.26□□□□□ -0.13
HMGCL-204ENST00000436439 APLP1P51693 650 aa14.26□□□□□ -0.13
HMGCL-204ENST00000436439 NPM2Q86SE8 214 aaKnown RBP14.26□□□□□ -0.13
HMGCL-204ENST00000436439 CNBD1Q8NA66 436 aa14.26□□□□□ -0.13
HMGCL-204ENST00000436439 MAPK8IP3Q9UPT6 1336 aa14.26□□□□□ -0.13
HMGCL-204ENST00000436439 C21orf2O43822 256 aa14.25□□□□□ -0.13
HMGCL-204ENST00000436439 NEFMP07197 916 aa14.25□□□□□ -0.13
HMGCL-204ENST00000436439 HTRA3P83110 453 aa14.25□□□□□ -0.13
HMGCL-204ENST00000436439 C16orf71Q8IYS4 520 aaPredicted RBP14.25□□□□□ -0.13
HMGCL-204ENST00000436439 DNAJC5GQ8N7S2 189 aa14.25□□□□□ -0.13
HMGCL-204ENST00000436439 ZC3H4Q9UPT8 1303 aaKnown RBP14.25□□□□□ -0.13
HMGCL-204ENST00000436439 GLTPD2A6NH11 291 aa14.24□□□□□ -0.13
HMGCL-204ENST00000436439 TMPOP42166 694 aaKnown RBP14.24□□□□□ -0.13
HMGCL-204ENST00000436439 TAF7Q15545 349 aaPredicted RBP14.24□□□□□ -0.13
HMGCL-204ENST00000436439 SRGNP10124 158 aa14.23□□□□□ -0.13
HMGCL-204ENST00000436439 PDZRN3Q9UPQ7 1066 aa14.23□□□□□ -0.13
HMGCL-204ENST00000436439 NPHP1O15259 732 aa14.22□□□□□ -0.13
HMGCL-204ENST00000436439 ST5P78524 1137 aa14.22□□□□□ -0.13
HMGCL-204ENST00000436439 FSTL1Q12841 308 aa14.22□□□□□ -0.13
HMGCL-204ENST00000436439 HLFQ16534 295 aa14.22□□□□□ -0.13
HMGCL-204ENST00000436439 CLEC4GQ6UXB4 293 aa14.22□□□□□ -0.13
HMGCL-204ENST00000436439 THUMPD2Q9BTF0 503 aaKnown RBP14.22□□□□□ -0.13
HMGCL-204ENST00000436439 POTECB2RU33 542 aa14.22□□□□□ -0.13
HMGCL-204ENST00000436439 STYK1Q6J9G0 422 aa14.22□□□□□ -0.13
HMGCL-204ENST00000436439 PRPF40BQ6NWY9 871 aaKnown RBP14.22□□□□□ -0.13
HMGCL-204ENST00000436439 NBPF5PQ86XG9 351 aaPredicted RBP14.22□□□□□ -0.13
HMGCL-204ENST00000436439 WWC1Q8IX03 1113 aa14.22□□□□□ -0.13
HMGCL-204ENST00000436439 FAM177BA6PVY3 158 aa14.21□□□□□ -0.14
HMGCL-204ENST00000436439 NFE2L2Q16236 605 aa14.21□□□□□ -0.14
HMGCL-204ENST00000436439 WDR63Q8IWG1 891 aa14.21□□□□□ -0.14
HMGCL-204ENST00000436439 CNKSR1Q969H4 720 aa14.21□□□□□ -0.14
HMGCL-204ENST00000436439 MASTLQ96GX5 879 aa14.21□□□□□ -0.14
HMGCL-204ENST00000436439 NIP7Q9Y221 180 aaKnown RBP eCLIP14.21□□□□□ -0.14
HMGCL-204ENST00000436439 ZNF652Q9Y2D9 606 aa14.21□□□□□ -0.14
HMGCL-204ENST00000436439 EIF4A1P60842 406 aaKnown RBP14.2□□□□□ -0.14
HMGCL-204ENST00000436439 GOLGA2Q08379 1002 aa14.2□□□□□ -0.14
HMGCL-204ENST00000436439 SALL2Q9Y467 1007 aaPredicted RBP14.2□□□□□ -0.14
HMGCL-204ENST00000436439 LTBP3Q9NS15 1303 aa14.2□□□□□ -0.14
HMGCL-204ENST00000436439 VEGFAP15692 232 aaPredicted RBP14.19□□□□□ -0.14
HMGCL-204ENST00000436439 RIPK4P57078 832 aa14.19□□□□□ -0.14
HMGCL-204ENST00000436439 ERFEQ4G0M1 354 aa14.19□□□□□ -0.14
HMGCL-204ENST00000436439 IFFO2Q5TF58 517 aa14.19□□□□□ -0.14
HMGCL-204ENST00000436439 SMC1BQ8NDV3 1235 aa14.19□□□□□ -0.14
HMGCL-204ENST00000436439 C7orf43Q8WVR3 580 aa14.19□□□□□ -0.14
HMGCL-204ENST00000436439 TAOK3Q9H2K8 898 aa14.19□□□□□ -0.14
HMGCL-204ENST00000436439 TRIM35Q9UPQ4 493 aa14.19□□□□□ -0.14
HMGCL-204ENST00000436439 KLRG2A4D1S0 409 aaPredicted RBP14.18□□□□□ -0.14
HMGCL-204ENST00000436439 LMOD3Q0VAK6 560 aa14.18□□□□□ -0.14
HMGCL-204ENST00000436439 OLFM4Q6UX06 510 aa14.18□□□□□ -0.14
HMGCL-204ENST00000436439 TRMT2AQ8IZ69 625 aaKnown RBP14.18□□□□□ -0.14
HMGCL-204ENST00000436439 RRP7AQ9Y3A4 280 aaKnown RBP14.18□□□□□ -0.14
HMGCL-204ENST00000436439 ABCC12Q96J65 1359 aa14.17□□□□□ -0.14
HMGCL-204ENST00000436439 IL16Q14005 1332 aa14.17□□□□□ -0.14
HMGCL-204ENST00000436439 RGL2O15211 777 aa14.17□□□□□ -0.14
HMGCL-204ENST00000436439 NEUROD2Q15784 382 aa14.17□□□□□ -0.14
HMGCL-204ENST00000436439 TPTE2Q6XPS3 522 aa14.17□□□□□ -0.14
HMGCL-204ENST00000436439 TTLL7Q6ZT98 887 aa14.17□□□□□ -0.14
HMGCL-204ENST00000436439 E9PSI1 815 aa14.16□□□□□ -0.14
HMGCL-204ENST00000436439 MYL6BP14649 208 aa14.16□□□□□ -0.14
HMGCL-204ENST00000436439 NPR1P16066 1061 aa14.16□□□□□ -0.14
HMGCL-204ENST00000436439 SLFN5Q08AF3 891 aa14.16□□□□□ -0.14
HMGCL-204ENST00000436439 DPY19L2Q6NUT2 758 aa14.16□□□□□ -0.14
HMGCL-204ENST00000436439 KLRG1Q96E93 195 aa14.16□□□□□ -0.14
HMGCL-204ENST00000436439 SUPT16HQ9Y5B9 1047 aaKnown RBP14.16□□□□□ -0.14
HMGCL-204ENST00000436439 MAP3K15Q6ZN16 1313 aa14.15□□□□□ -0.14
HMGCL-204ENST00000436439 UBN2Q6ZU65 1347 aa14.15□□□□□ -0.14
HMGCL-204ENST00000436439 DDNO94850 711 aaPredicted RBP14.15□□□□□ -0.14
HMGCL-204ENST00000436439 DUSP27Q5VZP5 1158 aa14.15□□□□□ -0.14
HMGCL-204ENST00000436439 NUTM1Q86Y26 1132 aa14.15□□□□□ -0.14
HMGCL-204ENST00000436439 CDCA7LQ96GN5 454 aa14.15□□□□□ -0.14
HMGCL-204ENST00000436439 SCN4AP35499 1836 aa14.15□□□□□ -0.14
HMGCL-204ENST00000436439 ERVV-1B6SEH8 477 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms