RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 SLC16A10Q8TF71 515 aa12.09□□□□□ -0.47
NIF3L1-208ENST00000436412 TMUB1Q9BVT8 246 aa12.09□□□□□ -0.47
NIF3L1-208ENST00000436412 ABCC6O95255 1503 aa12.09□□□□□ -0.47
NIF3L1-208ENST00000436412 TNS2Q63HR2 1409 aa12.09□□□□□ -0.47
NIF3L1-208ENST00000436412 TTC21BQ7Z4L5 1316 aa12.09□□□□□ -0.47
NIF3L1-208ENST00000436412 EVC2Q86UK5 1308 aa12.09□□□□□ -0.47
NIF3L1-208ENST00000436412 PIK3C2AO00443 1686 aa12.08□□□□□ -0.48
NIF3L1-208ENST00000436412 GPR162Q16538 588 aa12.08□□□□□ -0.48
NIF3L1-208ENST00000436412 TRPM1Q7Z4N2 1603 aa12.08□□□□□ -0.48
NIF3L1-208ENST00000436412 QRICH2Q9H0J4 1663 aa12.07□□□□□ -0.48
NIF3L1-208ENST00000436412 GIGYF1O75420 1035 aaPredicted RBP12.07□□□□□ -0.48
NIF3L1-208ENST00000436412 MAP2K5Q13163 448 aa12.07□□□□□ -0.48
NIF3L1-208ENST00000436412 V9GY48 417 aaPredicted RBP12.07□□□□□ -0.48
NIF3L1-208ENST00000436412 NHSQ6T4R5 1651 aa12.06□□□□□ -0.48
NIF3L1-208ENST00000436412 RGPD5Q99666 1765 aa12.06□□□□□ -0.48
NIF3L1-208ENST00000436412 DDX11L8A8MPP1 907 aa12.06□□□□□ -0.48
NIF3L1-208ENST00000436412 POLD1P28340 1107 aa12.06□□□□□ -0.48
NIF3L1-208ENST00000436412 PUS10Q3MIT2 529 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-208ENST00000436412 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.06□□□□□ -0.48
NIF3L1-208ENST00000436412 EMID1Q96A84 441 aaPredicted RBP12.06□□□□□ -0.48
NIF3L1-208ENST00000436412 PAPPAQ13219 1627 aa12.05□□□□□ -0.48
NIF3L1-208ENST00000436412 RNF223E7ERA6 249 aa12.05□□□□□ -0.48
NIF3L1-208ENST00000436412 SLC27A3Q5K4L6 730 aa12.05□□□□□ -0.48
NIF3L1-208ENST00000436412 SCUBE3Q8IX30 993 aa12.05□□□□□ -0.48
NIF3L1-208ENST00000436412 IRF6O14896 467 aa12.04□□□□□ -0.48
NIF3L1-208ENST00000436412 NR1I2O75469 434 aa12.04□□□□□ -0.48
NIF3L1-208ENST00000436412 IL2RBP14784 551 aa12.04□□□□□ -0.48
NIF3L1-208ENST00000436412 GGCXP38435 758 aa12.04□□□□□ -0.48
NIF3L1-208ENST00000436412 RDH13Q8NBN7 331 aa12.04□□□□□ -0.48
NIF3L1-208ENST00000436412 ACSBG1Q96GR2 724 aa12.04□□□□□ -0.48
NIF3L1-208ENST00000436412 NLRP2Q9NX02 1062 aa12.04□□□□□ -0.48
NIF3L1-208ENST00000436412 NFAT5O94916 1531 aa12.04□□□□□ -0.48
NIF3L1-208ENST00000436412 TULP1O00294 542 aaPredicted RBP12.03□□□□□ -0.48
NIF3L1-208ENST00000436412 GCGRP47871 477 aa12.03□□□□□ -0.48
NIF3L1-208ENST00000436412 ZNF827Q17R98 1081 aa12.03□□□□□ -0.48
NIF3L1-208ENST00000436412 LRRC4BQ9NT99 713 aa12.03□□□□□ -0.48
NIF3L1-208ENST00000436412 GRIN3BO60391 1043 aa12.02□□□□□ -0.49
NIF3L1-208ENST00000436412 S1PR4O95977 384 aa12.02□□□□□ -0.49
NIF3L1-208ENST00000436412 ADH1BP00325 375 aa12.02□□□□□ -0.49
NIF3L1-208ENST00000436412 KTN1Q86UP2 1357 aaKnown RBP12.02□□□□□ -0.49
NIF3L1-208ENST00000436412 BTAF1O14981 1849 aa12.02□□□□□ -0.49
NIF3L1-208ENST00000436412 FUT2Q10981 343 aa12.01□□□□□ -0.49
NIF3L1-208ENST00000436412 MORN1Q5T089 497 aa12.01□□□□□ -0.49
NIF3L1-208ENST00000436412 USP31Q70CQ4 1352 aa12.01□□□□□ -0.49
NIF3L1-208ENST00000436412 QSER1Q2KHR3 1735 aa12□□□□□ -0.49
NIF3L1-208ENST00000436412 PPEF1O14829 653 aaPredicted RBP12□□□□□ -0.49
NIF3L1-208ENST00000436412 SULF1Q8IWU6 871 aa12□□□□□ -0.49
NIF3L1-208ENST00000436412 TFCP2L1Q9NZI6 479 aa12□□□□□ -0.49
NIF3L1-208ENST00000436412 COL24A1Q17RW2 1714 aa12□□□□□ -0.49
NIF3L1-208ENST00000436412 PNPLA7Q6ZV29 1317 aa11.99□□□□□ -0.49
NIF3L1-208ENST00000436412 LCE2BO14633 110 aa11.98□□□□□ -0.49
NIF3L1-208ENST00000436412 HMGB2P26583 209 aaKnown RBP11.98□□□□□ -0.49
NIF3L1-208ENST00000436412 ANKLE1Q8NAG6 615 aa11.98□□□□□ -0.49
NIF3L1-208ENST00000436412 ANKRD24Q8TF21 1146 aa11.98□□□□□ -0.49
NIF3L1-208ENST00000436412 CCDC102AQ96A19 550 aa11.98□□□□□ -0.49
NIF3L1-208ENST00000436412 THAP11Q96EK4 314 aa11.98□□□□□ -0.49
NIF3L1-208ENST00000436412 GFRA3O60609 400 aa11.97□□□□□ -0.49
NIF3L1-208ENST00000436412 CD46P15529 392 aa11.97□□□□□ -0.49
NIF3L1-208ENST00000436412 USP54Q70EL1 1684 aa11.97□□□□□ -0.49
NIF3L1-208ENST00000436412 ATP6V1AP38606 617 aa11.96□□□□□ -0.49
NIF3L1-208ENST00000436412 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.96□□□□□ -0.49
NIF3L1-208ENST00000436412 NLGN2Q8NFZ4 835 aa11.96□□□□□ -0.49
NIF3L1-208ENST00000436412 SHANK3Q9BYB0 1731 aa11.96□□□□□ -0.49
NIF3L1-208ENST00000436412 NME9Q86XW9 330 aa11.95□□□□□ -0.5
NIF3L1-208ENST00000436412 DDX54Q8TDD1 881 aaKnown RBP11.95□□□□□ -0.5
NIF3L1-208ENST00000436412 L3MBTL2Q969R5 705 aa11.95□□□□□ -0.5
NIF3L1-208ENST00000436412 SPSB2Q99619 263 aa11.95□□□□□ -0.5
NIF3L1-208ENST00000436412 SLC6A16Q9GZN6 736 aa11.95□□□□□ -0.5
NIF3L1-208ENST00000436412 SLC27A5Q9Y2P5 690 aa11.95□□□□□ -0.5
NIF3L1-208ENST00000436412 MON2Q7Z3U7 1717 aa11.94□□□□□ -0.5
NIF3L1-208ENST00000436412 ROCK2O75116 1388 aaKnown RBP11.94□□□□□ -0.5
NIF3L1-208ENST00000436412 ANKRD36BQ8N2N9 1353 aa11.94□□□□□ -0.5
NIF3L1-208ENST00000436412 YBX3P16989 372 aaKnown RBP eCLIP11.94□□□□□ -0.5
NIF3L1-208ENST00000436412 MDM2Q00987 491 aaPredicted RBP11.94□□□□□ -0.5
NIF3L1-208ENST00000436412 LAPTM4AQ15012 233 aa11.94□□□□□ -0.5
NIF3L1-208ENST00000436412 PLA2G2CQ5R387 149 aa11.94□□□□□ -0.5
NIF3L1-208ENST00000436412 HDGFL2Q7Z4V5 671 aaPredicted RBP11.94□□□□□ -0.5
NIF3L1-208ENST00000436412 IP6K1Q92551 441 aa11.94□□□□□ -0.5
NIF3L1-208ENST00000436412 LTN1O94822 1766 aa11.94□□□□□ -0.5
NIF3L1-208ENST00000436412 SBNO2Q9Y2G9 1366 aa11.93□□□□□ -0.5
NIF3L1-208ENST00000436412 SLC19A1P41440 591 aa11.93□□□□□ -0.5
NIF3L1-208ENST00000436412 Q6ZNB5 142 aa11.93□□□□□ -0.5
NIF3L1-208ENST00000436412 LIAT1Q6ZQX7 453 aa11.93□□□□□ -0.5
NIF3L1-208ENST00000436412 TRIM67Q6ZTA4 783 aa11.93□□□□□ -0.5
NIF3L1-208ENST00000436412 SYTL4Q96C24 671 aaPredicted RBP11.93□□□□□ -0.5
NIF3L1-208ENST00000436412 GPBP1L1Q9HC44 474 aaPredicted RBP11.93□□□□□ -0.5
NIF3L1-208ENST00000436412 CD2APQ9Y5K6 639 aa11.93□□□□□ -0.5
NIF3L1-208ENST00000436412 FAM160A2Q8N612 972 aaPredicted RBP11.92□□□□□ -0.5
NIF3L1-208ENST00000436412 CCNL1Q9UK58 526 aaPredicted RBP11.92□□□□□ -0.5
NIF3L1-208ENST00000436412 EDC4Q6P2E9 1401 aaKnown RBP11.92□□□□□ -0.5
NIF3L1-208ENST00000436412 ATP10DQ9P241 1426 aa11.92□□□□□ -0.5
NIF3L1-208ENST00000436412 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-208ENST00000436412 TUBGCP6Q96RT7 1819 aa11.91□□□□□ -0.5
NIF3L1-208ENST00000436412 NRG2O14511 850 aaPredicted RBP11.91□□□□□ -0.5
NIF3L1-208ENST00000436412 HSPA6P17066 643 aa11.91□□□□□ -0.5
NIF3L1-208ENST00000436412 FLAD1Q8NFF5 587 aa11.91□□□□□ -0.5
NIF3L1-208ENST00000436412 ZCRB1Q8TBF4 217 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-208ENST00000436412 TERF2IPQ9NYB0 399 aa11.91□□□□□ -0.5
NIF3L1-208ENST00000436412 LY75O60449 1722 aa11.91□□□□□ -0.5
NIF3L1-208ENST00000436412 CD163L1Q9NR16 1453 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms