RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 CNTROBQ8N137 903 aa20.42■□□□□ 0.86
NELFE-204ENST00000436289 POLR3GLQ9BT43 218 aa20.42■□□□□ 0.86
NELFE-204ENST00000436289 TIMELESSQ9UNS1 1208 aa20.42■□□□□ 0.86
NELFE-204ENST00000436289 WDR33Q9C0J8 1336 aaKnown RBP20.42■□□□□ 0.86
NELFE-204ENST00000436289 EPHX2P34913 555 aa20.41■□□□□ 0.86
NELFE-204ENST00000436289 PANK3Q9H999 370 aa20.41■□□□□ 0.86
NELFE-204ENST00000436289 RTKN2Q8IZC4 609 aa20.4■□□□□ 0.86
NELFE-204ENST00000436289 C7orf43Q8WVR3 580 aa20.4■□□□□ 0.86
NELFE-204ENST00000436289 VIRMAQ69YN4 1812 aaKnown RBP20.39■□□□□ 0.86
NELFE-204ENST00000436289 ECE1P42892 770 aa20.39■□□□□ 0.85
NELFE-204ENST00000436289 FKBP4Q02790 459 aaKnown RBP eCLIP20.39■□□□□ 0.85
NELFE-204ENST00000436289 TBC1D2BQ9UPU7 963 aa20.39■□□□□ 0.85
NELFE-204ENST00000436289 ABT1Q9ULW3 272 aaKnown RBP20.38■□□□□ 0.85
NELFE-204ENST00000436289 ANKRD31Q8N7Z5 1873 aa20.38■□□□□ 0.85
NELFE-204ENST00000436289 CCDC85CA6NKD9 419 aa20.37■□□□□ 0.85
NELFE-204ENST00000436289 NPR1P16066 1061 aa20.37■□□□□ 0.85
NELFE-204ENST00000436289 CLEC4GQ6UXB4 293 aa20.37■□□□□ 0.85
NELFE-204ENST00000436289 CCDC24Q8N4L8 307 aa20.37■□□□□ 0.85
NELFE-204ENST00000436289 GPC2Q8N158 579 aa20.36■□□□□ 0.85
NELFE-204ENST00000436289 SLX4Q8IY92 1834 aa20.35■□□□□ 0.85
NELFE-204ENST00000436289 FZD9O00144 591 aa20.35■□□□□ 0.85
NELFE-204ENST00000436289 MTHFSDQ2M296 383 aaKnown RBP20.35■□□□□ 0.85
NELFE-204ENST00000436289 MAP1SQ66K74 1059 aaPredicted RBP20.35■□□□□ 0.85
NELFE-204ENST00000436289 ZNF790Q6PG37 636 aa20.35■□□□□ 0.85
NELFE-204ENST00000436289 ZNF330Q9Y3S2 320 aaPredicted RBP20.35■□□□□ 0.85
NELFE-204ENST00000436289 HEG1Q9ULI3 1381 aa20.34■□□□□ 0.85
NELFE-204ENST00000436289 KLRG2A4D1S0 409 aaPredicted RBP20.34■□□□□ 0.85
NELFE-204ENST00000436289 CAMTA2O94983 1202 aa20.34■□□□□ 0.85
NELFE-204ENST00000436289 ZNF496Q96IT1 587 aaPredicted RBP20.34■□□□□ 0.85
NELFE-204ENST00000436289 DDX21Q9NR30 783 aaKnown RBP eCLIP20.34■□□□□ 0.85
NELFE-204ENST00000436289 KNSTRNQ9Y448 316 aa20.34■□□□□ 0.85
NELFE-204ENST00000436289 RGL2O15211 777 aa20.33■□□□□ 0.85
NELFE-204ENST00000436289 ALDH1B1P30837 517 aa20.33■□□□□ 0.85
NELFE-204ENST00000436289 TEFQ10587 303 aa20.33■□□□□ 0.85
NELFE-204ENST00000436289 TPTE2Q6XPS3 522 aa20.33■□□□□ 0.85
NELFE-204ENST00000436289 NBPF5PQ86XG9 351 aaPredicted RBP20.33■□□□□ 0.85
NELFE-204ENST00000436289 JDP2Q8WYK2 163 aa20.33■□□□□ 0.85
NELFE-204ENST00000436289 FMNL2Q96PY5 1086 aa20.33■□□□□ 0.85
NELFE-204ENST00000436289 ZNF277Q9NRM2 450 aaPredicted RBP20.33■□□□□ 0.85
NELFE-204ENST00000436289 ZNF652Q9Y2D9 606 aa20.33■□□□□ 0.85
NELFE-204ENST00000436289 ZNF541Q9H0D2 1346 aa20.32■□□□□ 0.84
NELFE-204ENST00000436289 CA12O43570 354 aa20.32■□□□□ 0.84
NELFE-204ENST00000436289 MAP2K2P36507 400 aa20.32■□□□□ 0.84
NELFE-204ENST00000436289 CAPNS2Q96L46 248 aa20.32■□□□□ 0.84
NELFE-204ENST00000436289 GPR101Q96P66 508 aaPredicted RBP20.32■□□□□ 0.84
NELFE-204ENST00000436289 COL11A2P13942 1736 aaPredicted RBP20.31■□□□□ 0.84
NELFE-204ENST00000436289 HMOX1P09601 288 aa20.31■□□□□ 0.84
NELFE-204ENST00000436289 IARSP41252 1262 aaKnown RBP20.31■□□□□ 0.84
NELFE-204ENST00000436289 DZIP3Q86Y13 1208 aaKnown RBP20.31■□□□□ 0.84
NELFE-204ENST00000436289 UBR2Q8IWV8 1755 aa20.31■□□□□ 0.84
NELFE-204ENST00000436289 RNF123Q5XPI4 1314 aa20.3■□□□□ 0.84
NELFE-204ENST00000436289 LMOD1P29536 600 aaPredicted RBP20.3■□□□□ 0.84
NELFE-204ENST00000436289 GRIPAP1Q4V328 841 aa20.3■□□□□ 0.84
NELFE-204ENST00000436289 ADAMTSL1Q8N6G6 1762 aa20.3■□□□□ 0.84
NELFE-204ENST00000436289 ARFGEF2Q9Y6D5 1785 aa20.3■□□□□ 0.84
NELFE-204ENST00000436289 SCN7AQ01118 1682 aa20.29■□□□□ 0.84
NELFE-204ENST00000436289 A1BGP04217 495 aa20.29■□□□□ 0.84
NELFE-204ENST00000436289 EIF6P56537 245 aaKnown RBP20.29■□□□□ 0.84
NELFE-204ENST00000436289 CC2D2BQ6DHV5 1058 aa20.29■□□□□ 0.84
NELFE-204ENST00000436289 SYNE4Q8N205 404 aa20.29■□□□□ 0.84
NELFE-204ENST00000436289 PSMD1Q99460 953 aa20.29■□□□□ 0.84
NELFE-204ENST00000436289 GNAT3A8MTJ3 354 aa20.27■□□□□ 0.84
NELFE-204ENST00000436289 DIAPH1O60610 1272 aaKnown RBP20.27■□□□□ 0.84
NELFE-204ENST00000436289 PAXIP1Q6ZW49 1069 aaPredicted RBP20.27■□□□□ 0.84
NELFE-204ENST00000436289 GAS2L2Q8NHY3 880 aa20.27■□□□□ 0.84
NELFE-204ENST00000436289 EIF4G2P78344 907 aaKnown RBP eCLIP20.26■□□□□ 0.83
NELFE-204ENST00000436289 USP50Q70EL3 339 aaPredicted RBP20.26■□□□□ 0.83
NELFE-204ENST00000436289 IL17REQ8NFR9 667 aa20.25■□□□□ 0.83
NELFE-204ENST00000436289 TLL2Q9Y6L7 1015 aa20.25■□□□□ 0.83
NELFE-204ENST00000436289 CYP4F22Q6NT55 531 aa20.24■□□□□ 0.83
NELFE-204ENST00000436289 HHIPL1Q96JK4 782 aa20.24■□□□□ 0.83
NELFE-204ENST00000436289 GTF2E1P29083 439 aaPredicted RBP20.22■□□□□ 0.83
NELFE-204ENST00000436289 CST9Q5W186 159 aa20.22■□□□□ 0.83
NELFE-204ENST00000436289 NIP7Q9Y221 180 aaKnown RBP eCLIP20.22■□□□□ 0.83
NELFE-204ENST00000436289 GJA3Q9Y6H8 435 aa20.22■□□□□ 0.83
NELFE-204ENST00000436289 CACNA1SQ13698 1873 aa20.22■□□□□ 0.83
NELFE-204ENST00000436289 THSD7BQ9C0I4 1608 aa20.21■□□□□ 0.83
NELFE-204ENST00000436289 BTBD11A6QL63 1104 aa20.21■□□□□ 0.83
NELFE-204ENST00000436289 AMER1Q5JTC6 1135 aaPredicted RBP20.21■□□□□ 0.83
NELFE-204ENST00000436289 CFAP44Q96MT7 982 aa20.21■□□□□ 0.83
NELFE-204ENST00000436289 MCOLN1Q9GZU1 580 aa20.21■□□□□ 0.83
NELFE-204ENST00000436289 BRPF1P55201 1214 aaPredicted RBP20.2■□□□□ 0.82
NELFE-204ENST00000436289 GRM1Q13255 1194 aa20.2■□□□□ 0.82
NELFE-204ENST00000436289 SNRPA1P09661 255 aaKnown RBP20.19■□□□□ 0.82
NELFE-204ENST00000436289 SCNN1DP51172 638 aa20.19■□□□□ 0.82
NELFE-204ENST00000436289 OLFM4Q6UX06 510 aa20.19■□□□□ 0.82
NELFE-204ENST00000436289 VPS33BQ9H267 617 aa20.19■□□□□ 0.82
NELFE-204ENST00000436289 USP16Q9Y5T5 823 aa20.19■□□□□ 0.82
NELFE-204ENST00000436289 PDE4DIPQ5VU43 2346 aa20.18■□□□□ 0.82
NELFE-204ENST00000436289 EPS15P42566 896 aa20.18■□□□□ 0.82
NELFE-204ENST00000436289 CRY2Q49AN0 593 aa20.18■□□□□ 0.82
NELFE-204ENST00000436289 SAPCD2Q86UD0 394 aa20.18■□□□□ 0.82
NELFE-204ENST00000436289 NYXQ9GZU5 481 aa20.18■□□□□ 0.82
NELFE-204ENST00000436289 CEMIPQ8WUJ3 1361 aa20.18■□□□□ 0.82
NELFE-204ENST00000436289 LARGE2Q8N3Y3 721 aa20.17■□□□□ 0.82
NELFE-204ENST00000436289 ADARB2Q9NS39 739 aaKnown RBP20.17■□□□□ 0.82
NELFE-204ENST00000436289 HSPA5P11021 654 aaKnown RBP20.16■□□□□ 0.82
NELFE-204ENST00000436289 BCORQ6W2J9 1755 aa20.16■□□□□ 0.82
NELFE-204ENST00000436289 AOC2O75106 756 aa20.15■□□□□ 0.82
NELFE-204ENST00000436289 HOXA10P31260 410 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms