RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 SH2B1Q9NRF2 756 aaPredicted RBP12.34□□□□□ -0.43
LDLRAD4-204ENST00000435606 TSPY2A6NKD2 308 aa12.34□□□□□ -0.43
LDLRAD4-204ENST00000435606 UQCRFS1P1P0C7P4 283 aa12.34□□□□□ -0.43
LDLRAD4-204ENST00000435606 ATP6V1AP38606 617 aa12.34□□□□□ -0.43
LDLRAD4-204ENST00000435606 LRRC27Q9C0I9 530 aa12.34□□□□□ -0.43
LDLRAD4-204ENST00000435606 TCP11L1Q9NUJ3 509 aa12.34□□□□□ -0.43
LDLRAD4-204ENST00000435606 GRIN2AQ12879 1464 aa12.34□□□□□ -0.43
LDLRAD4-204ENST00000435606 NCOA1Q15788 1441 aa12.34□□□□□ -0.43
LDLRAD4-204ENST00000435606 GOLGA8AA7E2F4 631 aa12.33□□□□□ -0.44
LDLRAD4-204ENST00000435606 GOLGA8BA8MQT2 603 aa12.33□□□□□ -0.44
LDLRAD4-204ENST00000435606 MAP3K2Q9Y2U5 619 aa12.33□□□□□ -0.44
LDLRAD4-204ENST00000435606 PABPN1LA6NDY0 278 aaKnown RBP12.33□□□□□ -0.44
LDLRAD4-204ENST00000435606 KIAA0754O94854 1291 aa12.33□□□□□ -0.44
LDLRAD4-204ENST00000435606 LIG1P18858 919 aa12.33□□□□□ -0.44
LDLRAD4-204ENST00000435606 ABCA10Q8WWZ4 1543 aa12.33□□□□□ -0.44
LDLRAD4-204ENST00000435606 PLEKHH1Q9ULM0 1364 aa12.33□□□□□ -0.44
LDLRAD4-204ENST00000435606 ARHGAP29Q52LW3 1261 aa12.33□□□□□ -0.44
LDLRAD4-204ENST00000435606 ZCRB1Q8TBF4 217 aaKnown RBP12.33□□□□□ -0.44
LDLRAD4-204ENST00000435606 PARP3Q9Y6F1 533 aa12.33□□□□□ -0.44
LDLRAD4-204ENST00000435606 LMOD1P29536 600 aaPredicted RBP12.32□□□□□ -0.44
LDLRAD4-204ENST00000435606 GRM1Q13255 1194 aa12.32□□□□□ -0.44
LDLRAD4-204ENST00000435606 MAP3K9P80192 1104 aa12.32□□□□□ -0.44
LDLRAD4-204ENST00000435606 CFAP100Q494V2 611 aa12.32□□□□□ -0.44
LDLRAD4-204ENST00000435606 PRPF40BQ6NWY9 871 aaKnown RBP12.32□□□□□ -0.44
LDLRAD4-204ENST00000435606 MFSD6Q6ZSS7 791 aa12.32□□□□□ -0.44
LDLRAD4-204ENST00000435606 SYCP3Q8IZU3 236 aa12.32□□□□□ -0.44
LDLRAD4-204ENST00000435606 EVI5LQ96CN4 794 aa12.32□□□□□ -0.44
LDLRAD4-204ENST00000435606 ZNF804AQ7Z570 1209 aa12.32□□□□□ -0.44
LDLRAD4-204ENST00000435606 MAP3K11Q16584 847 aa12.32□□□□□ -0.44
LDLRAD4-204ENST00000435606 FBXO31Q5XUX0 539 aaPredicted RBP12.32□□□□□ -0.44
LDLRAD4-204ENST00000435606 HOOK3Q86VS8 718 aa12.32□□□□□ -0.44
LDLRAD4-204ENST00000435606 UTP14AQ9BVJ6 771 aaKnown RBP12.32□□□□□ -0.44
LDLRAD4-204ENST00000435606 NLRP3Q96P20 1036 aa12.32□□□□□ -0.44
LDLRAD4-204ENST00000435606 FAM177A1Q8N128 213 aaPredicted RBP12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 LRRC45Q96CN5 670 aa12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 PIK3R4Q99570 1358 aa12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 CTNNA2P26232 953 aa12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 JDP2Q8WYK2 163 aa12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 DDB1Q16531 1140 aa12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 HOMER2Q9NSB8 354 aa12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 GRIPAP1Q4V328 841 aa12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 ERMNQ8TAM6 284 aa12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 CIZ1Q9ULV3 898 aaPredicted RBP12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 NCBP1Q09161 790 aaKnown RBP12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 COMMD10Q9Y6G5 202 aa12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 PRXQ9BXM0 1461 aa12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 STAMBPO95630 424 aa12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 TMEM67Q5HYA8 995 aa12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 CCDC8Q9H0W5 538 aaPredicted RBP12.31□□□□□ -0.44
LDLRAD4-204ENST00000435606 USP37Q86T82 979 aa12.3□□□□□ -0.44
LDLRAD4-204ENST00000435606 BICD1Q96G01 975 aa12.3□□□□□ -0.44
LDLRAD4-204ENST00000435606 IDI1Q13907 227 aa12.3□□□□□ -0.44
LDLRAD4-204ENST00000435606 CKAP2LQ8IYA6 745 aa12.3□□□□□ -0.44
LDLRAD4-204ENST00000435606 SCAND2PQ9GZW5 306 aaPredicted RBP12.3□□□□□ -0.44
LDLRAD4-204ENST00000435606 GIGYF2Q6Y7W6 1299 aaKnown RBP12.3□□□□□ -0.44
LDLRAD4-204ENST00000435606 PCF11O94913 1555 aaKnown RBP12.3□□□□□ -0.44
LDLRAD4-204ENST00000435606 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
LDLRAD4-204ENST00000435606 TSPY3P0CV98 308 aa12.3□□□□□ -0.44
LDLRAD4-204ENST00000435606 TSPY8P0CW00 308 aa12.3□□□□□ -0.44
LDLRAD4-204ENST00000435606 CCDC174Q6PII3 467 aa12.3□□□□□ -0.44
LDLRAD4-204ENST00000435606 FAM114A1Q8IWE2 563 aa12.3□□□□□ -0.44
LDLRAD4-204ENST00000435606 VAT1LQ9HCJ6 419 aa12.29□□□□□ -0.44
LDLRAD4-204ENST00000435606 ANO10Q9NW15 660 aa12.29□□□□□ -0.44
LDLRAD4-204ENST00000435606 SLFN5Q08AF3 891 aa12.29□□□□□ -0.44
LDLRAD4-204ENST00000435606 THUMPD2Q9BTF0 503 aaKnown RBP12.29□□□□□ -0.44
LDLRAD4-204ENST00000435606 FLIIQ13045 1269 aa12.29□□□□□ -0.44
LDLRAD4-204ENST00000435606 CCDC83Q8IWF9 413 aa12.29□□□□□ -0.44
LDLRAD4-204ENST00000435606 SSX2IPQ9Y2D8 614 aa12.29□□□□□ -0.44
LDLRAD4-204ENST00000435606 ABCC5O15440 1437 aa12.29□□□□□ -0.44
LDLRAD4-204ENST00000435606 RTCBQ9Y3I0 505 aaKnown RBP12.29□□□□□ -0.44
LDLRAD4-204ENST00000435606 CTAGE5O15320 804 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 KLHL10Q6JEL2 608 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 CCDC82Q8N4S0 544 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 GOLIM4O00461 696 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 TFCP2L1Q9NZI6 479 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 USO1O60763 962 aaKnown RBP12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 CTNNBL1Q8WYA6 563 aaPredicted RBP12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 EMILIN1Q9Y6C2 1016 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 GSTTP1A0A1W2PQM5 241 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 ACSBG1Q96GR2 724 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 TAOK3Q9H2K8 898 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 NKTRP30414 1462 aaKnown RBP12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 TBCAO75347 108 aaKnown RBP12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 CHRNA2Q15822 529 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 UBE3BQ7Z3V4 1068 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 KIF4AO95239 1232 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 ACEP12821 1306 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 NOS1P29475 1434 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 MCM3P25205 808 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 KRT23Q9C075 422 aa12.28□□□□□ -0.44
LDLRAD4-204ENST00000435606 WDR7Q9Y4E6 1490 aa12.27□□□□□ -0.44
LDLRAD4-204ENST00000435606 CNNM3Q8NE01 707 aa12.27□□□□□ -0.44
LDLRAD4-204ENST00000435606 ITSN2Q9NZM3 1697 aa12.27□□□□□ -0.44
LDLRAD4-204ENST00000435606 SCAF11Q99590 1463 aaKnown RBP12.27□□□□□ -0.44
LDLRAD4-204ENST00000435606 ZSCAN12O43309 604 aa12.27□□□□□ -0.44
LDLRAD4-204ENST00000435606 CCDC172P0C7W6 258 aa12.27□□□□□ -0.44
LDLRAD4-204ENST00000435606 EYA3Q99504 573 aa12.27□□□□□ -0.44
LDLRAD4-204ENST00000435606 CCDC66A2RUB6 948 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms