RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 ADAMTS19Q8TE59 1207 aa8.38□□□□□ -1.07
LINC00353-201ENST00000435401 C7orf43Q8WVR3 580 aa8.38□□□□□ -1.07
LINC00353-201ENST00000435401 USP17L3A6NCW0 530 aa8.37□□□□□ -1.07
LINC00353-201ENST00000435401 USP17L4A6NCW7 530 aa8.37□□□□□ -1.07
LINC00353-201ENST00000435401 ATP9BO43861 1147 aa8.37□□□□□ -1.07
LINC00353-201ENST00000435401 ALAS2P22557 587 aa8.37□□□□□ -1.07
LINC00353-201ENST00000435401 USP17L2Q6R6M4 530 aa8.37□□□□□ -1.07
LINC00353-201ENST00000435401 USP17L1Q7RTZ2 530 aa8.37□□□□□ -1.07
LINC00353-201ENST00000435401 LARGE2Q8N3Y3 721 aa8.37□□□□□ -1.07
LINC00353-201ENST00000435401 CHMP3Q9Y3E7 222 aa8.37□□□□□ -1.07
LINC00353-201ENST00000435401 ELOA3CA0A087WX78 387 aaPredicted RBP8.36□□□□□ -1.07
LINC00353-201ENST00000435401 ELOA3DA6NLF2 546 aaPredicted RBP8.36□□□□□ -1.07
LINC00353-201ENST00000435401 M0R2N6 131 aa8.36□□□□□ -1.07
LINC00353-201ENST00000435401 PSMA6P60900 246 aaKnown RBP8.36□□□□□ -1.07
LINC00353-201ENST00000435401 CLDN10P78369 228 aa8.36□□□□□ -1.07
LINC00353-201ENST00000435401 ELOA3BQ3SY89 546 aa8.36□□□□□ -1.07
LINC00353-201ENST00000435401 C1orf53Q5VUE5 145 aa8.36□□□□□ -1.07
LINC00353-201ENST00000435401 ELOA3Q8NG57 546 aa8.36□□□□□ -1.07
LINC00353-201ENST00000435401 KIAA1024Q9UPX6 916 aa8.36□□□□□ -1.07
LINC00353-201ENST00000435401 PALM3A6NDB9 673 aaPredicted RBP8.35□□□□□ -1.07
LINC00353-201ENST00000435401 SYT9Q86SS6 491 aa8.35□□□□□ -1.07
LINC00353-201ENST00000435401 OGFOD1Q8N543 542 aa8.35□□□□□ -1.07
LINC00353-201ENST00000435401 RHPN1Q8TCX5 695 aa8.35□□□□□ -1.07
LINC00353-201ENST00000435401 UCN2Q96RP3 112 aa8.35□□□□□ -1.07
LINC00353-201ENST00000435401 MKRN1Q9UHC7 482 aaKnown RBP8.35□□□□□ -1.07
LINC00353-201ENST00000435401 C1QTNF9BB2RNN3 333 aa8.34□□□□□ -1.07
LINC00353-201ENST00000435401 K7ELQ4 463 aaPredicted RBP8.34□□□□□ -1.07
LINC00353-201ENST00000435401 SIN3BO75182 1162 aa8.34□□□□□ -1.07
LINC00353-201ENST00000435401 ANKIB1Q9P2G1 1089 aa8.34□□□□□ -1.07
LINC00353-201ENST00000435401 RBM19Q9Y4C8 960 aaKnown RBP8.34□□□□□ -1.07
LINC00353-201ENST00000435401 HIRAP54198 1017 aaPredicted RBP8.33□□□□□ -1.08
LINC00353-201ENST00000435401 SFSWAPQ12872 951 aaKnown RBP8.33□□□□□ -1.08
LINC00353-201ENST00000435401 SH3PXD2AQ5TCZ1 1133 aa8.33□□□□□ -1.08
LINC00353-201ENST00000435401 TSPAN10Q9H1Z9 355 aaPredicted RBP8.33□□□□□ -1.08
LINC00353-201ENST00000435401 HCN4Q9Y3Q4 1203 aa8.33□□□□□ -1.08
LINC00353-201ENST00000435401 ADARB2-AS1A8MUL3 147 aa8.32□□□□□ -1.08
LINC00353-201ENST00000435401 POTEAQ6S8J7 498 aa8.32□□□□□ -1.08
LINC00353-201ENST00000435401 CD163Q86VB7 1156 aa8.32□□□□□ -1.08
LINC00353-201ENST00000435401 SIX5Q8N196 739 aa8.32□□□□□ -1.08
LINC00353-201ENST00000435401 PLVAPQ9BX97 442 aa8.32□□□□□ -1.08
LINC00353-201ENST00000435401 NEUROD1Q13562 356 aa8.31□□□□□ -1.08
LINC00353-201ENST00000435401 TRIM11Q96F44 468 aa8.31□□□□□ -1.08
LINC00353-201ENST00000435401 MDFIQ99750 246 aa8.31□□□□□ -1.08
LINC00353-201ENST00000435401 PHACTR1Q9C0D0 580 aa8.31□□□□□ -1.08
LINC00353-201ENST00000435401 SPDYE3A6NKU9 549 aa8.3□□□□□ -1.08
LINC00353-201ENST00000435401 FURINP09958 794 aa8.3□□□□□ -1.08
LINC00353-201ENST00000435401 TNFRSF25Q93038 417 aa8.3□□□□□ -1.08
LINC00353-201ENST00000435401 CEP63Q96MT8 703 aa8.3□□□□□ -1.08
LINC00353-201ENST00000435401 SLC30A3Q99726 388 aa8.3□□□□□ -1.08
LINC00353-201ENST00000435401 SFI1A8K8P3 1242 aa8.29□□□□□ -1.08
LINC00353-201ENST00000435401 PPP1R12BO60237 982 aaPredicted RBP8.29□□□□□ -1.08
LINC00353-201ENST00000435401 CHRNA4P43681 627 aa8.29□□□□□ -1.08
LINC00353-201ENST00000435401 KCNQ4P56696 695 aa8.29□□□□□ -1.08
LINC00353-201ENST00000435401 TSEN2Q8NCE0 465 aaKnown RBP8.29□□□□□ -1.08
LINC00353-201ENST00000435401 GAS2L2Q8NHY3 880 aa8.29□□□□□ -1.08
LINC00353-201ENST00000435401 BRD7Q9NPI1 651 aa8.29□□□□□ -1.08
LINC00353-201ENST00000435401 ATAD2Q6PL18 1390 aa8.28□□□□□ -1.08
LINC00353-201ENST00000435401 DKK1O94907 266 aa8.28□□□□□ -1.08
LINC00353-201ENST00000435401 SPATA31C1P0DKV0 1188 aa8.28□□□□□ -1.08
LINC00353-201ENST00000435401 RASA1P20936 1047 aa8.28□□□□□ -1.08
LINC00353-201ENST00000435401 SPEM2Q0P670 501 aa8.28□□□□□ -1.08
LINC00353-201ENST00000435401 STAG2Q8N3U4 1231 aa8.28□□□□□ -1.08
LINC00353-201ENST00000435401 ZNF594Q96JF6 807 aaPredicted RBP8.28□□□□□ -1.08
LINC00353-201ENST00000435401 SUSD3Q96L08 255 aa8.28□□□□□ -1.08
LINC00353-201ENST00000435401 TFIP11Q9UBB9 837 aaKnown RBP8.28□□□□□ -1.08
LINC00353-201ENST00000435401 KCNH4Q9UQ05 1017 aa8.28□□□□□ -1.08
LINC00353-201ENST00000435401 SEC13P55735 322 aa8.27□□□□□ -1.09
LINC00353-201ENST00000435401 HIF1AQ16665 826 aa8.27□□□□□ -1.09
LINC00353-201ENST00000435401 FNBP4Q8N3X1 1017 aaPredicted RBP8.27□□□□□ -1.09
LINC00353-201ENST00000435401 HSH2DQ96JZ2 352 aa8.27□□□□□ -1.09
LINC00353-201ENST00000435401 PRDM6Q9NQX0 595 aa8.27□□□□□ -1.09
LINC00353-201ENST00000435401 C21orf2O43822 256 aa8.26□□□□□ -1.09
LINC00353-201ENST00000435401 TMEM132AQ24JP5 1023 aa8.26□□□□□ -1.09
LINC00353-201ENST00000435401 PRRT3Q5FWE3 981 aa8.26□□□□□ -1.09
LINC00353-201ENST00000435401 PROSER2Q86WR7 435 aaPredicted RBP8.26□□□□□ -1.09
LINC00353-201ENST00000435401 ALDH16A1Q8IZ83 802 aa8.26□□□□□ -1.09
LINC00353-201ENST00000435401 ZNF280CQ8ND82 737 aa8.26□□□□□ -1.09
LINC00353-201ENST00000435401 GLMNQ92990 594 aa8.26□□□□□ -1.09
LINC00353-201ENST00000435401 CLUAP1Q96AJ1 413 aa8.26□□□□□ -1.09
LINC00353-201ENST00000435401 M0R082 166 aa8.25□□□□□ -1.09
LINC00353-201ENST00000435401 GATA4P43694 442 aa8.25□□□□□ -1.09
LINC00353-201ENST00000435401 LARP1Q6PKG0 1096 aaKnown RBP8.25□□□□□ -1.09
LINC00353-201ENST00000435401 ZNF417Q8TAU3 575 aa8.25□□□□□ -1.09
LINC00353-201ENST00000435401 SCG3Q8WXD2 468 aaKnown RBP8.25□□□□□ -1.09
LINC00353-201ENST00000435401 ZNF587Q96SQ5 575 aaPredicted RBP8.25□□□□□ -1.09
LINC00353-201ENST00000435401 C2orf49Q9BVC5 232 aaPredicted RBP8.25□□□□□ -1.09
LINC00353-201ENST00000435401 MAFBQ9Y5Q3 323 aaPredicted RBP8.25□□□□□ -1.09
LINC00353-201ENST00000435401 ADH7P40394 386 aa8.24□□□□□ -1.09
LINC00353-201ENST00000435401 TYRO3Q06418 890 aa8.24□□□□□ -1.09
LINC00353-201ENST00000435401 MICALL1Q8N3F8 863 aa8.24□□□□□ -1.09
LINC00353-201ENST00000435401 EFCC1Q9HA90 598 aa8.24□□□□□ -1.09
LINC00353-201ENST00000435401 STARD13Q9Y3M8 1113 aa8.24□□□□□ -1.09
LINC00353-201ENST00000435401 APBA3O96018 575 aa8.23□□□□□ -1.09
LINC00353-201ENST00000435401 BTLAQ7Z6A9 289 aa8.23□□□□□ -1.09
LINC00353-201ENST00000435401 RAB44Q7Z6P3 723 aaPredicted RBP8.23□□□□□ -1.09
LINC00353-201ENST00000435401 CHMP7Q8WUX9 453 aaPredicted RBP8.23□□□□□ -1.09
LINC00353-201ENST00000435401 ALBP02768 609 aa8.22□□□□□ -1.09
LINC00353-201ENST00000435401 TRIM28Q13263 835 aaKnown RBP8.22□□□□□ -1.09
LINC00353-201ENST00000435401 COL9A3Q14050 684 aaPredicted RBP8.22□□□□□ -1.09
LINC00353-201ENST00000435401 DOC2BQ14184 412 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms