RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 LINS1Q8NG48 757 aa19.01■□□□□ 0.63
TMEM40-204ENST00000435218 GNAI3P08754 354 aa19■□□□□ 0.63
TMEM40-204ENST00000435218 IL6STP40189 918 aaPredicted RBP19■□□□□ 0.63
TMEM40-204ENST00000435218 ITPK1Q13572 414 aa19■□□□□ 0.63
TMEM40-204ENST00000435218 POTEAQ6S8J7 498 aa19■□□□□ 0.63
TMEM40-204ENST00000435218 RIC3Q7Z5B4 369 aa19■□□□□ 0.63
TMEM40-204ENST00000435218 METTL22Q9BUU2 404 aaPredicted RBP19■□□□□ 0.63
TMEM40-204ENST00000435218 HDAC1Q13547 482 aaPredicted RBP19■□□□□ 0.63
TMEM40-204ENST00000435218 MEIS3Q99687 375 aa19■□□□□ 0.63
TMEM40-204ENST00000435218 CCDC87Q9NVE4 849 aa18.99■□□□□ 0.63
TMEM40-204ENST00000435218 ZBTB1Q9Y2K1 713 aa18.99■□□□□ 0.63
TMEM40-204ENST00000435218 C4BP0C0L5 1744 aa18.98■□□□□ 0.63
TMEM40-204ENST00000435218 NEXNQ0ZGT2 675 aa18.98■□□□□ 0.63
TMEM40-204ENST00000435218 USP44Q9H0E7 712 aa18.98■□□□□ 0.63
TMEM40-204ENST00000435218 RWDD1Q9H446 243 aaPredicted RBP18.98■□□□□ 0.63
TMEM40-204ENST00000435218 CNTNAP4Q9C0A0 1308 aa18.98■□□□□ 0.63
TMEM40-204ENST00000435218 CRKLP46109 303 aaKnown RBP18.97■□□□□ 0.63
TMEM40-204ENST00000435218 INTS5Q6P9B9 1019 aaKnown RBP18.97■□□□□ 0.63
TMEM40-204ENST00000435218 TTLL7Q6ZT98 887 aa18.97■□□□□ 0.63
TMEM40-204ENST00000435218 UTYO14607 1347 aa18.96■□□□□ 0.63
TMEM40-204ENST00000435218 IGHDP01880 384 aa18.96■□□□□ 0.63
TMEM40-204ENST00000435218 EIF5P55010 431 aaKnown RBP18.96■□□□□ 0.63
TMEM40-204ENST00000435218 RPAP2Q8IXW5 612 aaPredicted RBP18.96■□□□□ 0.63
TMEM40-204ENST00000435218 SCN7AQ01118 1682 aa18.96■□□□□ 0.63
TMEM40-204ENST00000435218 UBR3Q6ZT12 1888 aa18.95■□□□□ 0.62
TMEM40-204ENST00000435218 IGKV5-2P06315 115 aa18.95■□□□□ 0.62
TMEM40-204ENST00000435218 RC3H1Q5TC82 1133 aaKnown RBP18.95■□□□□ 0.62
TMEM40-204ENST00000435218 MAP3K15Q6ZN16 1313 aa18.95■□□□□ 0.62
TMEM40-204ENST00000435218 NEURL1BA8MQ27 555 aa18.95■□□□□ 0.62
TMEM40-204ENST00000435218 GNAI2P04899 355 aa18.95■□□□□ 0.62
TMEM40-204ENST00000435218 KIF6Q6ZMV9 814 aa18.95■□□□□ 0.62
TMEM40-204ENST00000435218 LINC00116Q8NCU8 138 aa18.95■□□□□ 0.62
TMEM40-204ENST00000435218 C4AP0C0L4 1744 aa18.94■□□□□ 0.62
TMEM40-204ENST00000435218 ANKRD44Q8N8A2 993 aa18.94■□□□□ 0.62
TMEM40-204ENST00000435218 MYD88Q99836 296 aa18.94■□□□□ 0.62
TMEM40-204ENST00000435218 CCNL1Q9UK58 526 aaPredicted RBP18.94■□□□□ 0.62
TMEM40-204ENST00000435218 HDAC5Q9UQL6 1122 aa18.94■□□□□ 0.62
TMEM40-204ENST00000435218 ERVV-1B6SEH8 477 aa18.93■□□□□ 0.62
TMEM40-204ENST00000435218 UBTFL1P0CB47 393 aaPredicted RBP18.93■□□□□ 0.62
TMEM40-204ENST00000435218 HMGB2P26583 209 aaKnown RBP18.93■□□□□ 0.62
TMEM40-204ENST00000435218 CWF19L2Q2TBE0 894 aaKnown RBP18.93■□□□□ 0.62
TMEM40-204ENST00000435218 CEP85Q6P2H3 762 aa18.93■□□□□ 0.62
TMEM40-204ENST00000435218 C1orf115Q9H7X2 142 aa18.93■□□□□ 0.62
TMEM40-204ENST00000435218 COL15A1P39059 1388 aa18.92■□□□□ 0.62
TMEM40-204ENST00000435218 TRIM37O94972 964 aa18.92■□□□□ 0.62
TMEM40-204ENST00000435218 GCKRQ14397 625 aa18.92■□□□□ 0.62
TMEM40-204ENST00000435218 GIGYF2Q6Y7W6 1299 aaKnown RBP18.92■□□□□ 0.62
TMEM40-204ENST00000435218 SIRT2Q8IXJ6 389 aa18.92■□□□□ 0.62
TMEM40-204ENST00000435218 MYH3P11055 1940 aa18.92■□□□□ 0.62
TMEM40-204ENST00000435218 GRM8O00222 908 aa18.91■□□□□ 0.62
TMEM40-204ENST00000435218 NBPF7P0C2Y1 421 aaPredicted RBP18.91■□□□□ 0.62
TMEM40-204ENST00000435218 TRIM28Q13263 835 aaKnown RBP18.91■□□□□ 0.62
TMEM40-204ENST00000435218 SLC27A3Q5K4L6 730 aa18.91■□□□□ 0.62
TMEM40-204ENST00000435218 NPM2Q86SE8 214 aaKnown RBP18.91■□□□□ 0.62
TMEM40-204ENST00000435218 SMC5Q8IY18 1101 aa18.91■□□□□ 0.62
TMEM40-204ENST00000435218 ZBTB3Q9H5J0 574 aa18.91■□□□□ 0.62
TMEM40-204ENST00000435218 RGL2O15211 777 aa18.9■□□□□ 0.62
TMEM40-204ENST00000435218 TCIRG1Q13488 830 aa18.9■□□□□ 0.62
TMEM40-204ENST00000435218 ISCA1Q9BUE6 129 aa18.9■□□□□ 0.62
TMEM40-204ENST00000435218 C9orf78Q9NZ63 289 aaPredicted RBP18.9■□□□□ 0.62
TMEM40-204ENST00000435218 PLSCR1O15162 318 aa18.9■□□□□ 0.62
TMEM40-204ENST00000435218 HSP90AB3PQ58FF7 597 aa18.9■□□□□ 0.62
TMEM40-204ENST00000435218 DZIP3Q86Y13 1208 aaKnown RBP18.9■□□□□ 0.62
TMEM40-204ENST00000435218 CCDC191Q8NCU4 936 aa18.9■□□□□ 0.62
TMEM40-204ENST00000435218 ZNF330Q9Y3S2 320 aaPredicted RBP18.9■□□□□ 0.62
TMEM40-204ENST00000435218 PELP1Q8IZL8 1130 aaKnown RBP18.89■□□□□ 0.61
TMEM40-204ENST00000435218 GCC1Q96CN9 775 aa18.89■□□□□ 0.61
TMEM40-204ENST00000435218 LRRFIP2Q9Y608 721 aaKnown RBP18.89■□□□□ 0.61
TMEM40-204ENST00000435218 A0A087WZG4 1122 aa18.88■□□□□ 0.61
TMEM40-204ENST00000435218 HMMRO75330 724 aa18.88■□□□□ 0.61
TMEM40-204ENST00000435218 RPS6KA4O75676 772 aa18.88■□□□□ 0.61
TMEM40-204ENST00000435218 LAMB2P55268 1798 aa18.88■□□□□ 0.61
TMEM40-204ENST00000435218 ATP8B2P98198 1209 aa18.87■□□□□ 0.61
TMEM40-204ENST00000435218 MTX1Q13505 466 aa18.87■□□□□ 0.61
TMEM40-204ENST00000435218 CWC25Q9NXE8 425 aaPredicted RBP18.87■□□□□ 0.61
TMEM40-204ENST00000435218 KCNQ4P56696 695 aa18.86■□□□□ 0.61
TMEM40-204ENST00000435218 LRRC4BQ9NT99 713 aa18.86■□□□□ 0.61
TMEM40-204ENST00000435218 TUBGCP6Q96RT7 1819 aa18.85■□□□□ 0.61
TMEM40-204ENST00000435218 COL24A1Q17RW2 1714 aa18.85■□□□□ 0.61
TMEM40-204ENST00000435218 ATP5J2-PTCD1G3V325 749 aa18.85■□□□□ 0.61
TMEM40-204ENST00000435218 H7C1W4 665 aa18.85■□□□□ 0.61
TMEM40-204ENST00000435218 CASP7P55210 303 aa18.85■□□□□ 0.61
TMEM40-204ENST00000435218 DCTPP1Q9H773 170 aa18.85■□□□□ 0.61
TMEM40-204ENST00000435218 CAMTA2O94983 1202 aa18.84■□□□□ 0.61
TMEM40-204ENST00000435218 HLFQ16534 295 aa18.84■□□□□ 0.61
TMEM40-204ENST00000435218 SSH3Q8TE77 659 aa18.84■□□□□ 0.61
TMEM40-204ENST00000435218 TBC1D2BQ9UPU7 963 aa18.84■□□□□ 0.61
TMEM40-204ENST00000435218 CLEC4GQ6UXB4 293 aa18.84■□□□□ 0.61
TMEM40-204ENST00000435218 CASZ1Q86V15 1759 aa18.83■□□□□ 0.61
TMEM40-204ENST00000435218 QSER1Q2KHR3 1735 aa18.83■□□□□ 0.6
TMEM40-204ENST00000435218 POLA2Q14181 598 aa18.83■□□□□ 0.6
TMEM40-204ENST00000435218 TXNRD1Q16881 649 aa18.83■□□□□ 0.6
TMEM40-204ENST00000435218 ZNF34Q8IZ26 560 aa18.83■□□□□ 0.6
TMEM40-204ENST00000435218 KAZALD1Q96I82 304 aa18.83■□□□□ 0.6
TMEM40-204ENST00000435218 RTCBQ9Y3I0 505 aaKnown RBP18.83■□□□□ 0.6
TMEM40-204ENST00000435218 ADRA2BP18089 450 aa18.82■□□□□ 0.6
TMEM40-204ENST00000435218 SUCLG2Q96I99 432 aa18.82■□□□□ 0.6
TMEM40-204ENST00000435218 DDX60Q8IY21 1712 aaKnown RBP18.82■□□□□ 0.6
TMEM40-204ENST00000435218 PNMA6EA0A0J9YXQ4 647 aa18.81■□□□□ 0.6
TMEM40-204ENST00000435218 GNPATO15228 680 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms