RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 GRM8O00222 908 aa19.45■□□□□ 0.7
HLA-DQB2-231ENST00000435145 OS9Q13438 667 aaPredicted RBP19.45■□□□□ 0.7
HLA-DQB2-231ENST00000435145 ERBB4Q15303 1308 aa19.45■□□□□ 0.7
HLA-DQB2-231ENST00000435145 PLEKHG2Q9H7P9 1386 aa19.45■□□□□ 0.7
HLA-DQB2-231ENST00000435145 SCN11AQ9UI33 1791 aa19.45■□□□□ 0.7
HLA-DQB2-231ENST00000435145 DDX58O95786 925 aaKnown RBP19.44■□□□□ 0.7
HLA-DQB2-231ENST00000435145 MBD3O95983 291 aa19.44■□□□□ 0.7
HLA-DQB2-231ENST00000435145 NCLP19338 710 aaKnown RBP19.44■□□□□ 0.7
HLA-DQB2-231ENST00000435145 RASEFQ8IZ41 740 aa19.44■□□□□ 0.7
HLA-DQB2-231ENST00000435145 KCNB2Q92953 911 aa19.44■□□□□ 0.7
HLA-DQB2-231ENST00000435145 LMOD2Q6P5Q4 547 aa19.44■□□□□ 0.7
HLA-DQB2-231ENST00000435145 SUCLG2Q96I99 432 aa19.44■□□□□ 0.7
HLA-DQB2-231ENST00000435145 NOL8Q76FK4 1167 aaKnown RBP19.43■□□□□ 0.7
HLA-DQB2-231ENST00000435145 PROSER2Q86WR7 435 aaPredicted RBP19.43■□□□□ 0.7
HLA-DQB2-231ENST00000435145 RUFY2Q8WXA3 655 aa19.43■□□□□ 0.7
HLA-DQB2-231ENST00000435145 GPATCH3Q96I76 525 aa19.43■□□□□ 0.7
HLA-DQB2-231ENST00000435145 C19orf44Q9H6X5 657 aa19.43■□□□□ 0.7
HLA-DQB2-231ENST00000435145 TMEM63CQ9P1W3 806 aa19.43■□□□□ 0.7
HLA-DQB2-231ENST00000435145 PA2G4Q9UQ80 394 aaKnown RBP19.43■□□□□ 0.7
HLA-DQB2-231ENST00000435145 C5P01031 1676 aa19.43■□□□□ 0.7
HLA-DQB2-231ENST00000435145 NPHP3Q7Z494 1330 aa19.42■□□□□ 0.7
HLA-DQB2-231ENST00000435145 CWC27Q6UX04 472 aaKnown RBP19.42■□□□□ 0.7
HLA-DQB2-231ENST00000435145 KIAA1211Q6ZU35 1233 aa19.42■□□□□ 0.7
HLA-DQB2-231ENST00000435145 RBM27Q9P2N5 1060 aaKnown RBP19.42■□□□□ 0.7
HLA-DQB2-231ENST00000435145 MRC1P22897 1456 aa19.42■□□□□ 0.7
HLA-DQB2-231ENST00000435145 WDR33Q9C0J8 1336 aaKnown RBP19.42■□□□□ 0.7
HLA-DQB2-231ENST00000435145 ZNF790Q6PG37 636 aa19.42■□□□□ 0.7
HLA-DQB2-231ENST00000435145 SLC52A2Q9HAB3 445 aa19.42■□□□□ 0.7
HLA-DQB2-231ENST00000435145 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.42■□□□□ 0.7
HLA-DQB2-231ENST00000435145 NSFL1CQ9UNZ2 370 aaKnown RBP19.42■□□□□ 0.7
HLA-DQB2-231ENST00000435145 COL18A1P39060 1754 aa19.42■□□□□ 0.7
HLA-DQB2-231ENST00000435145 RPAP1Q9BWH6 1393 aaPredicted RBP19.41■□□□□ 0.7
HLA-DQB2-231ENST00000435145 IGKV5-2P06315 115 aa19.41■□□□□ 0.7
HLA-DQB2-231ENST00000435145 EVI5LQ96CN4 794 aa19.41■□□□□ 0.7
HLA-DQB2-231ENST00000435145 TRIM44Q96DX7 344 aaPredicted RBP19.41■□□□□ 0.7
HLA-DQB2-231ENST00000435145 RBSNQ9H1K0 784 aa19.41■□□□□ 0.7
HLA-DQB2-231ENST00000435145 DIAPH3Q9NSV4 1193 aa19.41■□□□□ 0.7
HLA-DQB2-231ENST00000435145 SASH1O94885 1247 aa19.41■□□□□ 0.7
HLA-DQB2-231ENST00000435145 IFIT2P09913 472 aaKnown RBP19.41■□□□□ 0.7
HLA-DQB2-231ENST00000435145 PRIM1P49642 420 aaKnown RBP19.41■□□□□ 0.7
HLA-DQB2-231ENST00000435145 FOXD4L5Q5VV16 416 aaPredicted RBP19.41■□□□□ 0.7
HLA-DQB2-231ENST00000435145 FOXD4L4Q8WXT5 416 aaPredicted RBP19.41■□□□□ 0.7
HLA-DQB2-231ENST00000435145 BICC1Q9H694 974 aaKnown RBP19.41■□□□□ 0.7
HLA-DQB2-231ENST00000435145 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.41■□□□□ 0.7
HLA-DQB2-231ENST00000435145 AK2P54819 239 aa19.4■□□□□ 0.7
HLA-DQB2-231ENST00000435145 LRSAM1Q6UWE0 723 aa19.4■□□□□ 0.7
HLA-DQB2-231ENST00000435145 RUFY3Q7L099 469 aa19.4■□□□□ 0.7
HLA-DQB2-231ENST00000435145 SNRKQ9NRH2 765 aa19.4■□□□□ 0.7
HLA-DQB2-231ENST00000435145 LIMCH1Q9UPQ0 1083 aa19.4■□□□□ 0.7
HLA-DQB2-231ENST00000435145 SPG7Q9UQ90 795 aa19.4■□□□□ 0.7
HLA-DQB2-231ENST00000435145 PHKG2P15735 406 aa19.39■□□□□ 0.69
HLA-DQB2-231ENST00000435145 LARP1Q6PKG0 1096 aaKnown RBP19.39■□□□□ 0.69
HLA-DQB2-231ENST00000435145 AACSQ86V21 672 aa19.39■□□□□ 0.69
HLA-DQB2-231ENST00000435145 RAPGEF4Q8WZA2 1011 aa19.39■□□□□ 0.69
HLA-DQB2-231ENST00000435145 TM6SF1Q9BZW5 370 aa19.39■□□□□ 0.69
HLA-DQB2-231ENST00000435145 MEGF6O75095 1541 aa19.39■□□□□ 0.69
HLA-DQB2-231ENST00000435145 ZC3H6P61129 1189 aaKnown RBP19.38■□□□□ 0.69
HLA-DQB2-231ENST00000435145 PTH1RQ03431 593 aa19.38■□□□□ 0.69
HLA-DQB2-231ENST00000435145 LRP10Q7Z4F1 713 aa19.38■□□□□ 0.69
HLA-DQB2-231ENST00000435145 TMEM87AQ8NBN3 555 aa19.38■□□□□ 0.69
HLA-DQB2-231ENST00000435145 ANP32BQ92688 251 aaKnown RBP19.38■□□□□ 0.69
HLA-DQB2-231ENST00000435145 EAF2Q96CJ1 260 aaPredicted RBP19.38■□□□□ 0.69
HLA-DQB2-231ENST00000435145 PDLIM2Q96JY6 352 aa19.38■□□□□ 0.69
HLA-DQB2-231ENST00000435145 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.38■□□□□ 0.69
HLA-DQB2-231ENST00000435145 NEURL1BA8MQ27 555 aa19.37■□□□□ 0.69
HLA-DQB2-231ENST00000435145 DCCP43146 1447 aa19.37■□□□□ 0.69
HLA-DQB2-231ENST00000435145 SLC39A6Q13433 755 aa19.37■□□□□ 0.69
HLA-DQB2-231ENST00000435145 NECTIN1Q15223 517 aa19.37■□□□□ 0.69
HLA-DQB2-231ENST00000435145 TATP17735 454 aaPredicted RBP19.36■□□□□ 0.69
HLA-DQB2-231ENST00000435145 AIMP1Q12904 312 aaKnown RBP19.36■□□□□ 0.69
HLA-DQB2-231ENST00000435145 G3BP1Q13283 466 aaKnown RBP eCLIP19.36■□□□□ 0.69
HLA-DQB2-231ENST00000435145 METTL22Q9BUU2 404 aaPredicted RBP19.36■□□□□ 0.69
HLA-DQB2-231ENST00000435145 ZSWIM6Q9HCJ5 1215 aa19.36■□□□□ 0.69
HLA-DQB2-231ENST00000435145 HIP1O00291 1037 aa19.35■□□□□ 0.69
HLA-DQB2-231ENST00000435145 GCKRQ14397 625 aa19.35■□□□□ 0.69
HLA-DQB2-231ENST00000435145 VPS53Q5VIR6 699 aa19.35■□□□□ 0.69
HLA-DQB2-231ENST00000435145 RIC3Q7Z5B4 369 aa19.35■□□□□ 0.69
HLA-DQB2-231ENST00000435145 NLRP2Q9NX02 1062 aa19.35■□□□□ 0.69
HLA-DQB2-231ENST00000435145 COL15A1P39059 1388 aa19.35■□□□□ 0.69
HLA-DQB2-231ENST00000435145 CCDC171Q6TFL3 1326 aa19.35■□□□□ 0.69
HLA-DQB2-231ENST00000435145 PKD1L3Q7Z443 1732 aa19.35■□□□□ 0.69
HLA-DQB2-231ENST00000435145 HS1BP3Q53T59 392 aa19.35■□□□□ 0.69
HLA-DQB2-231ENST00000435145 XAGE3Q8WTP9 111 aa19.35■□□□□ 0.69
HLA-DQB2-231ENST00000435145 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.35■□□□□ 0.69
HLA-DQB2-231ENST00000435145 SYCE3A1L190 88 aa19.34■□□□□ 0.69
HLA-DQB2-231ENST00000435145 CASTP20810 708 aaKnown RBP19.34■□□□□ 0.69
HLA-DQB2-231ENST00000435145 NEXNQ0ZGT2 675 aa19.34■□□□□ 0.69
HLA-DQB2-231ENST00000435145 NFATC2IPQ8NCF5 419 aa19.34■□□□□ 0.69
HLA-DQB2-231ENST00000435145 ZNF496Q96IT1 587 aaPredicted RBP19.34■□□□□ 0.69
HLA-DQB2-231ENST00000435145 IFNL2Q8IZJ0 200 aa19.34■□□□□ 0.69
HLA-DQB2-231ENST00000435145 ZSCAN22P10073 491 aaPredicted RBP19.33■□□□□ 0.68
HLA-DQB2-231ENST00000435145 ADCK5Q3MIX3 580 aa19.33■□□□□ 0.68
HLA-DQB2-231ENST00000435145 PRPF40BQ6NWY9 871 aaKnown RBP19.33■□□□□ 0.68
HLA-DQB2-231ENST00000435145 COPS6Q7L5N1 327 aa19.33■□□□□ 0.68
HLA-DQB2-231ENST00000435145 MAP4K1Q92918 833 aa19.33■□□□□ 0.68
HLA-DQB2-231ENST00000435145 GLI3P10071 1580 aa19.33■□□□□ 0.68
HLA-DQB2-231ENST00000435145 JCADQ9P266 1359 aa19.33■□□□□ 0.68
HLA-DQB2-231ENST00000435145 EPHA10Q5JZY3 1008 aa19.32■□□□□ 0.68
HLA-DQB2-231ENST00000435145 ZSCAN30Q86W11 494 aa19.32■□□□□ 0.68
HLA-DQB2-231ENST00000435145 DCAF5Q96JK2 942 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 484.5 ms