RNA–Protein interactions for RNA: ENST00000433292.2

SNRPCP1-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 1, humanhuman

BASIC

Gene SNRPCP1, Length 458 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP1-201ENST00000433292 PHACTR3Q96KR7 559 aa12.57□□□□□ -0.4
SNRPCP1-201ENST00000433292 FMNL2Q96PY5 1086 aa12.57□□□□□ -0.4
SNRPCP1-201ENST00000433292 SETDB2Q96T68 719 aa12.57□□□□□ -0.4
SNRPCP1-201ENST00000433292 MKRN1Q9UHC7 482 aaKnown RBP12.57□□□□□ -0.4
SNRPCP1-201ENST00000433292 LTBP3Q9NS15 1303 aa12.57□□□□□ -0.4
SNRPCP1-201ENST00000433292 NPHP1O15259 732 aa12.56□□□□□ -0.4
SNRPCP1-201ENST00000433292 CHADLQ6NUI6 762 aa12.56□□□□□ -0.4
SNRPCP1-201ENST00000433292 DZIP3Q86Y13 1208 aaKnown RBP12.56□□□□□ -0.4
SNRPCP1-201ENST00000433292 TEX13AQ9BXU3 409 aaPredicted RBP12.56□□□□□ -0.4
SNRPCP1-201ENST00000433292 PDZRN3Q9UPQ7 1066 aa12.56□□□□□ -0.4
SNRPCP1-201ENST00000433292 USP16Q9Y5T5 823 aa12.56□□□□□ -0.4
SNRPCP1-201ENST00000433292 SCN4AP35499 1836 aa12.55□□□□□ -0.4
SNRPCP1-201ENST00000433292 BTBD11A6QL63 1104 aa12.55□□□□□ -0.4
SNRPCP1-201ENST00000433292 PRKAR2BP31323 418 aa12.55□□□□□ -0.4
SNRPCP1-201ENST00000433292 ST5P78524 1137 aa12.55□□□□□ -0.4
SNRPCP1-201ENST00000433292 STYK1Q6J9G0 422 aa12.55□□□□□ -0.4
SNRPCP1-201ENST00000433292 OLFM4Q6UX06 510 aa12.55□□□□□ -0.4
SNRPCP1-201ENST00000433292 CNKSR1Q969H4 720 aa12.55□□□□□ -0.4
SNRPCP1-201ENST00000433292 C7orf43Q8WVR3 580 aa12.54□□□□□ -0.4
SNRPCP1-201ENST00000433292 MASTLQ96GX5 879 aa12.54□□□□□ -0.4
SNRPCP1-201ENST00000433292 RSPH6AQ9H0K4 717 aa12.54□□□□□ -0.4
SNRPCP1-201ENST00000433292 CREBZFQ9NS37 354 aa12.54□□□□□ -0.4
SNRPCP1-201ENST00000433292 NPC1L1Q9UHC9 1359 aa12.54□□□□□ -0.4
SNRPCP1-201ENST00000433292 NPM2Q86SE8 214 aaKnown RBP12.53□□□□□ -0.4
SNRPCP1-201ENST00000433292 NBPF5PQ86XG9 351 aaPredicted RBP12.53□□□□□ -0.4
SNRPCP1-201ENST00000433292 PASKQ96RG2 1323 aa12.53□□□□□ -0.4
SNRPCP1-201ENST00000433292 ZNF541Q9H0D2 1346 aa12.53□□□□□ -0.4
SNRPCP1-201ENST00000433292 ADAMTSL1Q8N6G6 1762 aa12.53□□□□□ -0.4
SNRPCP1-201ENST00000433292 NBPF26B4DH59 902 aa12.52□□□□□ -0.41
SNRPCP1-201ENST00000433292 NBPF10Q6P3W6 841 aaKnown RBP12.52□□□□□ -0.41
SNRPCP1-201ENST00000433292 MCM10Q7L590 875 aa12.52□□□□□ -0.41
SNRPCP1-201ENST00000433292 NBPF15Q8N660 670 aa12.52□□□□□ -0.41
SNRPCP1-201ENST00000433292 LAMB4A4D0S4 1761 aa12.51□□□□□ -0.41
SNRPCP1-201ENST00000433292 FAM177BA6PVY3 158 aa12.51□□□□□ -0.41
SNRPCP1-201ENST00000433292 DCTN1Q14203 1278 aa12.51□□□□□ -0.41
SNRPCP1-201ENST00000433292 CCDC93Q567U6 631 aa12.51□□□□□ -0.41
SNRPCP1-201ENST00000433292 SOGA3Q5TF21 947 aa12.51□□□□□ -0.41
SNRPCP1-201ENST00000433292 L3MBTL3Q96JM7 780 aaPredicted RBP12.51□□□□□ -0.41
SNRPCP1-201ENST00000433292 TAF1DQ9H5J8 278 aaPredicted RBP12.51□□□□□ -0.41
SNRPCP1-201ENST00000433292 ZNF277Q9NRM2 450 aaPredicted RBP12.51□□□□□ -0.41
SNRPCP1-201ENST00000433292 CNTNAP1P78357 1384 aa12.51□□□□□ -0.41
SNRPCP1-201ENST00000433292 FOXN1O15353 648 aa12.5□□□□□ -0.41
SNRPCP1-201ENST00000433292 NPR1P16066 1061 aa12.5□□□□□ -0.41
SNRPCP1-201ENST00000433292 LDHDQ86WU2 507 aa12.5□□□□□ -0.41
SNRPCP1-201ENST00000433292 NIP7Q9Y221 180 aaKnown RBP eCLIP12.5□□□□□ -0.41
SNRPCP1-201ENST00000433292 COL4A5P29400 1685 aa12.5□□□□□ -0.41
SNRPCP1-201ENST00000433292 SNED1Q8TER0 1413 aa12.49□□□□□ -0.41
SNRPCP1-201ENST00000433292 ABCC12Q96J65 1359 aa12.49□□□□□ -0.41
SNRPCP1-201ENST00000433292 RNF123Q5XPI4 1314 aa12.49□□□□□ -0.41
SNRPCP1-201ENST00000433292 KLRG2A4D1S0 409 aaPredicted RBP12.49□□□□□ -0.41
SNRPCP1-201ENST00000433292 IQCA1LA6NCM1 817 aa12.49□□□□□ -0.41
SNRPCP1-201ENST00000433292 ITGBL1O95965 494 aaPredicted RBP12.49□□□□□ -0.41
SNRPCP1-201ENST00000433292 SNRPA1P09661 255 aaKnown RBP12.49□□□□□ -0.41
SNRPCP1-201ENST00000433292 FKBP4Q02790 459 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNRPCP1-201ENST00000433292 HLFQ16534 295 aa12.49□□□□□ -0.41
SNRPCP1-201ENST00000433292 EAPPQ56P03 285 aaPredicted RBP12.49□□□□□ -0.41
SNRPCP1-201ENST00000433292 CLEC4GQ6UXB4 293 aa12.49□□□□□ -0.41
SNRPCP1-201ENST00000433292 SLC51AQ86UW1 340 aa12.49□□□□□ -0.41
SNRPCP1-201ENST00000433292 ZNF652Q9Y2D9 606 aa12.49□□□□□ -0.41
SNRPCP1-201ENST00000433292 DLG5Q8TDM6 1919 aa12.49□□□□□ -0.41
SNRPCP1-201ENST00000433292 NUP98P52948 1817 aa12.48□□□□□ -0.41
SNRPCP1-201ENST00000433292 LTBP1Q14766 1721 aa12.48□□□□□ -0.41
SNRPCP1-201ENST00000433292 VEGFBP49765 207 aa12.48□□□□□ -0.41
SNRPCP1-201ENST00000433292 U2AF1L5P0DN76 240 aaPredicted RBP12.47□□□□□ -0.41
SNRPCP1-201ENST00000433292 U2AF1Q01081 240 aaKnown RBP eCLIP12.47□□□□□ -0.41
SNRPCP1-201ENST00000433292 TPTE2Q6XPS3 522 aa12.47□□□□□ -0.41
SNRPCP1-201ENST00000433292 MIS18AQ9NYP9 233 aa12.47□□□□□ -0.41
SNRPCP1-201ENST00000433292 HACL1Q9UJ83 578 aa12.47□□□□□ -0.41
SNRPCP1-201ENST00000433292 KDM3BQ7LBC6 1761 aa12.47□□□□□ -0.41
SNRPCP1-201ENST00000433292 TMEM88BA6NKF7 163 aa12.46□□□□□ -0.41
SNRPCP1-201ENST00000433292 EPHX2P34913 555 aa12.46□□□□□ -0.41
SNRPCP1-201ENST00000433292 IARSP41252 1262 aaKnown RBP12.46□□□□□ -0.41
SNRPCP1-201ENST00000433292 MAP1SQ66K74 1059 aaPredicted RBP12.46□□□□□ -0.41
SNRPCP1-201ENST00000433292 NUTM1Q86Y26 1132 aa12.46□□□□□ -0.41
SNRPCP1-201ENST00000433292 RTF1Q92541 710 aaKnown RBP12.46□□□□□ -0.41
SNRPCP1-201ENST00000433292 CFAP53Q96M91 514 aa12.46□□□□□ -0.41
SNRPCP1-201ENST00000433292 CLEC11AQ9Y240 323 aa12.46□□□□□ -0.41
SNRPCP1-201ENST00000433292 FZD9O00144 591 aa12.45□□□□□ -0.42
SNRPCP1-201ENST00000433292 PPP2R1AP30153 589 aa12.45□□□□□ -0.42
SNRPCP1-201ENST00000433292 SYNE4Q8N205 404 aa12.45□□□□□ -0.42
SNRPCP1-201ENST00000433292 NGEFQ8N5V2 710 aa12.45□□□□□ -0.42
SNRPCP1-201ENST00000433292 RTKN2Q8IZC4 609 aa12.44□□□□□ -0.42
SNRPCP1-201ENST00000433292 RGL2O15211 777 aa12.43□□□□□ -0.42
SNRPCP1-201ENST00000433292 GTF2E1P29083 439 aaPredicted RBP12.43□□□□□ -0.42
SNRPCP1-201ENST00000433292 CTCFP49711 727 aaPredicted RBP12.43□□□□□ -0.42
SNRPCP1-201ENST00000433292 LBX1P52954 281 aa12.43□□□□□ -0.42
SNRPCP1-201ENST00000433292 FMR1Q06787 632 aaKnown RBP eCLIP12.43□□□□□ -0.42
SNRPCP1-201ENST00000433292 CRY2Q49AN0 593 aa12.43□□□□□ -0.42
SNRPCP1-201ENST00000433292 CNTROBQ8N137 903 aa12.43□□□□□ -0.42
SNRPCP1-201ENST00000433292 PRDM10Q9NQV6 1147 aa12.43□□□□□ -0.42
SNRPCP1-201ENST00000433292 WBP1LQ9NX94 342 aa12.43□□□□□ -0.42
SNRPCP1-201ENST00000433292 NUDCQ9Y266 331 aa12.43□□□□□ -0.42
SNRPCP1-201ENST00000433292 UBN2Q6ZU65 1347 aa12.42□□□□□ -0.42
SNRPCP1-201ENST00000433292 THSD7BQ9C0I4 1608 aa12.42□□□□□ -0.42
SNRPCP1-201ENST00000433292 RASSF10A6NK89 507 aa12.42□□□□□ -0.42
SNRPCP1-201ENST00000433292 GPTP24298 496 aa12.42□□□□□ -0.42
SNRPCP1-201ENST00000433292 ALDH1B1P30837 517 aa12.42□□□□□ -0.42
SNRPCP1-201ENST00000433292 TAF7Q15545 349 aaPredicted RBP12.42□□□□□ -0.42
SNRPCP1-201ENST00000433292 TTLL7Q6ZT98 887 aa12.42□□□□□ -0.42
SNRPCP1-201ENST00000433292 GPC2Q8N158 579 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms