RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 COL13A1Q5TAT6 717 aaPredicted RBP23.46■■□□□ 1.35
CNOT9-204ENST00000432877 ZNF219Q9P2Y4 722 aaPredicted RBP23.46■■□□□ 1.35
CNOT9-204ENST00000432877 HTATSF1O43719 755 aaKnown RBP23.45■■□□□ 1.34
CNOT9-204ENST00000432877 PRPF40BQ6NWY9 871 aaKnown RBP23.45■■□□□ 1.34
CNOT9-204ENST00000432877 NBPF5PQ86XG9 351 aaPredicted RBP23.44■■□□□ 1.34
CNOT9-204ENST00000432877 TPTE2Q6XPS3 522 aa23.43■■□□□ 1.34
CNOT9-204ENST00000432877 VIRMAQ69YN4 1812 aaKnown RBP23.43■■□□□ 1.34
CNOT9-204ENST00000432877 KLRG2A4D1S0 409 aaPredicted RBP23.42■■□□□ 1.34
CNOT9-204ENST00000432877 U2AF1L5P0DN76 240 aaPredicted RBP23.42■■□□□ 1.34
CNOT9-204ENST00000432877 NPR1P16066 1061 aa23.42■■□□□ 1.34
CNOT9-204ENST00000432877 U2AF1Q01081 240 aaKnown RBP eCLIP23.42■■□□□ 1.34
CNOT9-204ENST00000432877 CHADLQ6NUI6 762 aa23.42■■□□□ 1.34
CNOT9-204ENST00000432877 IQCA1LA6NCM1 817 aa23.41■■□□□ 1.34
CNOT9-204ENST00000432877 C7orf43Q8WVR3 580 aa23.41■■□□□ 1.34
CNOT9-204ENST00000432877 SCN7AQ01118 1682 aa23.41■■□□□ 1.34
CNOT9-204ENST00000432877 CREBZFQ9NS37 354 aa23.4■■□□□ 1.34
CNOT9-204ENST00000432877 DDNO94850 711 aaPredicted RBP23.39■■□□□ 1.33
CNOT9-204ENST00000432877 CCDC93Q567U6 631 aa23.39■■□□□ 1.33
CNOT9-204ENST00000432877 MCM10Q7L590 875 aa23.39■■□□□ 1.33
CNOT9-204ENST00000432877 SIPA1L3O60292 1781 aaPredicted RBP23.38■■□□□ 1.33
CNOT9-204ENST00000432877 TAF7Q15545 349 aaPredicted RBP23.38■■□□□ 1.33
CNOT9-204ENST00000432877 TNS4Q8IZW8 715 aa23.38■■□□□ 1.33
CNOT9-204ENST00000432877 L3MBTL3Q96JM7 780 aaPredicted RBP23.38■■□□□ 1.33
CNOT9-204ENST00000432877 ANKRD31Q8N7Z5 1873 aa23.37■■□□□ 1.33
CNOT9-204ENST00000432877 PRAMEF22A3QJZ6 481 aa23.37■■□□□ 1.33
CNOT9-204ENST00000432877 HSPA1AP0DMV8 641 aaKnown RBP23.37■■□□□ 1.33
CNOT9-204ENST00000432877 HSPA1BP0DMV9 641 aaKnown RBP23.37■■□□□ 1.33
CNOT9-204ENST00000432877 PPP2R1AP30153 589 aa23.37■■□□□ 1.33
CNOT9-204ENST00000432877 ALDH1B1P30837 517 aa23.37■■□□□ 1.33
CNOT9-204ENST00000432877 RTKN2Q8IZC4 609 aa23.37■■□□□ 1.33
CNOT9-204ENST00000432877 NIP7Q9Y221 180 aaKnown RBP eCLIP23.37■■□□□ 1.33
CNOT9-204ENST00000432877 PIP4K2AP48426 406 aaPredicted RBP23.36■■□□□ 1.33
CNOT9-204ENST00000432877 NBPF26B4DH59 902 aa23.35■■□□□ 1.33
CNOT9-204ENST00000432877 FKBP4Q02790 459 aaKnown RBP eCLIP23.35■■□□□ 1.33
CNOT9-204ENST00000432877 NBPF10Q6P3W6 841 aaKnown RBP23.35■■□□□ 1.33
CNOT9-204ENST00000432877 LDHDQ86WU2 507 aa23.35■■□□□ 1.33
CNOT9-204ENST00000432877 NBPF15Q8N660 670 aa23.35■■□□□ 1.33
CNOT9-204ENST00000432877 TIAM2Q8IVF5 1701 aa23.35■■□□□ 1.33
CNOT9-204ENST00000432877 FER1L6Q2WGJ9 1857 aa23.34■■□□□ 1.33
CNOT9-204ENST00000432877 PNISRQ8TF01 805 aaKnown RBP23.33■■□□□ 1.33
CNOT9-204ENST00000432877 ERVV-1B6SEH8 477 aa23.32■■□□□ 1.32
CNOT9-204ENST00000432877 NEFMP07197 916 aa23.32■■□□□ 1.32
CNOT9-204ENST00000432877 GTF2E1P29083 439 aaPredicted RBP23.32■■□□□ 1.32
CNOT9-204ENST00000432877 DCTN1Q14203 1278 aa23.32■■□□□ 1.32
CNOT9-204ENST00000432877 TAF1DQ9H5J8 278 aaPredicted RBP23.32■■□□□ 1.32
CNOT9-204ENST00000432877 CCDC88AQ3V6T2 1871 aa23.31■■□□□ 1.32
CNOT9-204ENST00000432877 NYXQ9GZU5 481 aa23.31■■□□□ 1.32
CNOT9-204ENST00000432877 PCNTO95613 3336 aa23.31■■□□□ 1.32
CNOT9-204ENST00000432877 COL11A2P13942 1736 aaPredicted RBP23.3■■□□□ 1.32
CNOT9-204ENST00000432877 DICER1Q9UPY3 1922 aaKnown RBP23.3■■□□□ 1.32
CNOT9-204ENST00000432877 POTEIP0CG38 1075 aa23.3■■□□□ 1.32
CNOT9-204ENST00000432877 POTEJP0CG39 1038 aa23.3■■□□□ 1.32
CNOT9-204ENST00000432877 SLX4Q8IY92 1834 aa23.3■■□□□ 1.32
CNOT9-204ENST00000432877 HLFQ16534 295 aa23.29■■□□□ 1.32
CNOT9-204ENST00000432877 CC2D2BQ6DHV5 1058 aa23.29■■□□□ 1.32
CNOT9-204ENST00000432877 ZNF277Q9NRM2 450 aaPredicted RBP23.29■■□□□ 1.32
CNOT9-204ENST00000432877 PASKQ96RG2 1323 aa23.29■■□□□ 1.32
CNOT9-204ENST00000432877 GRIPAP1Q4V328 841 aa23.28■■□□□ 1.32
CNOT9-204ENST00000432877 PNMA8AQ86V59 439 aaPredicted RBP23.28■■□□□ 1.32
CNOT9-204ENST00000432877 HACL1Q9UJ83 578 aa23.28■■□□□ 1.32
CNOT9-204ENST00000432877 BCORQ6W2J9 1755 aa23.27■■□□□ 1.32
CNOT9-204ENST00000432877 FZD9O00144 591 aa23.27■■□□□ 1.32
CNOT9-204ENST00000432877 CRY2Q49AN0 593 aa23.27■■□□□ 1.32
CNOT9-204ENST00000432877 SYNE4Q8N205 404 aa23.27■■□□□ 1.32
CNOT9-204ENST00000432877 PSMD1Q99460 953 aa23.27■■□□□ 1.32
CNOT9-204ENST00000432877 MKRN1Q9UHC7 482 aaKnown RBP23.27■■□□□ 1.32
CNOT9-204ENST00000432877 FAM177BA6PVY3 158 aa23.26■■□□□ 1.31
CNOT9-204ENST00000432877 IARSP41252 1262 aaKnown RBP23.26■■□□□ 1.31
CNOT9-204ENST00000432877 MIS18AQ9NYP9 233 aa23.26■■□□□ 1.31
CNOT9-204ENST00000432877 TMEM88BA6NKF7 163 aa23.25■■□□□ 1.31
CNOT9-204ENST00000432877 ITGBL1O95965 494 aaPredicted RBP23.25■■□□□ 1.31
CNOT9-204ENST00000432877 JDP2Q8WYK2 163 aa23.25■■□□□ 1.31
CNOT9-204ENST00000432877 PNNQ9H307 717 aaKnown RBP23.25■■□□□ 1.31
CNOT9-204ENST00000432877 CNTNAP1P78357 1384 aa23.25■■□□□ 1.31
CNOT9-204ENST00000432877 CAPN15O75808 1086 aa23.24■■□□□ 1.31
CNOT9-204ENST00000432877 EPHX2P34913 555 aa23.24■■□□□ 1.31
CNOT9-204ENST00000432877 KIF6Q6ZMV9 814 aa23.24■■□□□ 1.31
CNOT9-204ENST00000432877 GPC2Q8N158 579 aa23.24■■□□□ 1.31
CNOT9-204ENST00000432877 MAP3K15Q6ZN16 1313 aa23.24■■□□□ 1.31
CNOT9-204ENST00000432877 ARFGEF2Q9Y6D5 1785 aa23.23■■□□□ 1.31
CNOT9-204ENST00000432877 HOXA10P31260 410 aaPredicted RBP23.23■■□□□ 1.31
CNOT9-204ENST00000432877 EIF4A1P60842 406 aaKnown RBP23.23■■□□□ 1.31
CNOT9-204ENST00000432877 EAPPQ56P03 285 aaPredicted RBP23.23■■□□□ 1.31
CNOT9-204ENST00000432877 OLFM4Q6UX06 510 aa23.23■■□□□ 1.31
CNOT9-204ENST00000432877 CLEC11AQ9Y240 323 aa23.23■■□□□ 1.31
CNOT9-204ENST00000432877 ZNF541Q9H0D2 1346 aa23.23■■□□□ 1.31
CNOT9-204ENST00000432877 NGEFQ8N5V2 710 aa23.21■■□□□ 1.31
CNOT9-204ENST00000432877 RPGRQ92834 1020 aaKnown RBP23.21■■□□□ 1.31
CNOT9-204ENST00000432877 RRP7AQ9Y3A4 280 aaKnown RBP23.21■■□□□ 1.31
CNOT9-204ENST00000432877 SCN4AP35499 1836 aa23.2■■□□□ 1.3
CNOT9-204ENST00000432877 IBTKQ9P2D0 1353 aaPredicted RBP23.2■■□□□ 1.3
CNOT9-204ENST00000432877 EIF6P56537 245 aaKnown RBP23.2■■□□□ 1.3
CNOT9-204ENST00000432877 NFE2L2Q16236 605 aa23.2■■□□□ 1.3
CNOT9-204ENST00000432877 PLEKHF1Q96S99 279 aa23.2■■□□□ 1.3
CNOT9-204ENST00000432877 PRDM10Q9NQV6 1147 aa23.2■■□□□ 1.3
CNOT9-204ENST00000432877 ERBB4Q15303 1308 aa23.19■■□□□ 1.3
CNOT9-204ENST00000432877 NUTM1Q86Y26 1132 aa23.19■■□□□ 1.3
CNOT9-204ENST00000432877 CNTROBQ8N137 903 aa23.19■■□□□ 1.3
CNOT9-204ENST00000432877 RBM17Q96I25 401 aaKnown RBP23.19■■□□□ 1.3
CNOT9-204ENST00000432877 CRAMP1Q96RY5 1269 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms