RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 RAD50Q92878 1312 aa20.15■□□□□ 0.82
CHFR-203ENST00000432561 CAMTA1Q9Y6Y1 1673 aa20.15■□□□□ 0.82
CHFR-203ENST00000432561 ALDH1L1O75891 902 aa20.15■□□□□ 0.82
CHFR-203ENST00000432561 CSB-PGBD3P0DP91 1061 aa20.15■□□□□ 0.82
CHFR-203ENST00000432561 MTX1Q13505 466 aa20.15■□□□□ 0.82
CHFR-203ENST00000432561 CUL4AQ13619 759 aa20.15■□□□□ 0.82
CHFR-203ENST00000432561 HSP90AB4PQ58FF6 505 aa20.15■□□□□ 0.82
CHFR-203ENST00000432561 DDX21Q9NR30 783 aaKnown RBP eCLIP20.15■□□□□ 0.82
CHFR-203ENST00000432561 SNX14Q9Y5W7 946 aa20.15■□□□□ 0.82
CHFR-203ENST00000432561 C5P01031 1676 aa20.15■□□□□ 0.82
CHFR-203ENST00000432561 IGKV5-2P06315 115 aa20.15■□□□□ 0.82
CHFR-203ENST00000432561 RIC3Q7Z5B4 369 aa20.15■□□□□ 0.82
CHFR-203ENST00000432561 AACSQ86V21 672 aa20.15■□□□□ 0.82
CHFR-203ENST00000432561 NPHP3Q7Z494 1330 aa20.14■□□□□ 0.82
CHFR-203ENST00000432561 MCM2P49736 904 aa20.14■□□□□ 0.82
CHFR-203ENST00000432561 ZSCAN23Q3MJ62 389 aa20.14■□□□□ 0.82
CHFR-203ENST00000432561 MEGF6O75095 1541 aa20.14■□□□□ 0.81
CHFR-203ENST00000432561 LINS1Q8NG48 757 aa20.14■□□□□ 0.81
CHFR-203ENST00000432561 DDX54Q8TDD1 881 aaKnown RBP20.14■□□□□ 0.81
CHFR-203ENST00000432561 CCDC8Q9H0W5 538 aaPredicted RBP20.14■□□□□ 0.81
CHFR-203ENST00000432561 SLC52A2Q9HAB3 445 aa20.14■□□□□ 0.81
CHFR-203ENST00000432561 ISY1Q9ULR0 285 aaKnown RBP20.14■□□□□ 0.81
CHFR-203ENST00000432561 GLRX3O76003 335 aaKnown RBP20.13■□□□□ 0.81
CHFR-203ENST00000432561 IFIT2P09913 472 aaKnown RBP20.13■□□□□ 0.81
CHFR-203ENST00000432561 ZNF496Q96IT1 587 aaPredicted RBP20.13■□□□□ 0.81
CHFR-203ENST00000432561 TLR7Q9NYK1 1049 aaKnown RBP20.13■□□□□ 0.81
CHFR-203ENST00000432561 TCHHQ07283 1943 aa20.13■□□□□ 0.81
CHFR-203ENST00000432561 SASH1O94885 1247 aa20.13■□□□□ 0.81
CHFR-203ENST00000432561 PTH1RQ03431 593 aa20.13■□□□□ 0.81
CHFR-203ENST00000432561 XAGE3Q8WTP9 111 aa20.13■□□□□ 0.81
CHFR-203ENST00000432561 DIAPH3Q9NSV4 1193 aa20.13■□□□□ 0.81
CHFR-203ENST00000432561 OVOS2A0A0G2JMS6 1433 aa20.13■□□□□ 0.81
CHFR-203ENST00000432561 ALS2Q96Q42 1657 aa20.12■□□□□ 0.81
CHFR-203ENST00000432561 PHKG2P15735 406 aa20.12■□□□□ 0.81
CHFR-203ENST00000432561 ATF3P18847 181 aa20.12■□□□□ 0.81
CHFR-203ENST00000432561 ECHDC1Q9NTX5 307 aa20.12■□□□□ 0.81
CHFR-203ENST00000432561 BRD1O95696 1058 aa20.12■□□□□ 0.81
CHFR-203ENST00000432561 COPS6Q7L5N1 327 aa20.12■□□□□ 0.81
CHFR-203ENST00000432561 GDPD2Q9HCC8 539 aa20.12■□□□□ 0.81
CHFR-203ENST00000432561 USP16Q9Y5T5 823 aa20.12■□□□□ 0.81
CHFR-203ENST00000432561 ERBB4Q15303 1308 aa20.12■□□□□ 0.81
CHFR-203ENST00000432561 KIAA1211Q6ZU35 1233 aa20.11■□□□□ 0.81
CHFR-203ENST00000432561 EAF2Q96CJ1 260 aaPredicted RBP20.11■□□□□ 0.81
CHFR-203ENST00000432561 TTC41PQ6P2S7 1318 aa20.11■□□□□ 0.81
CHFR-203ENST00000432561 TMEM94Q12767 1356 aa20.11■□□□□ 0.81
CHFR-203ENST00000432561 DDX58O95786 925 aaKnown RBP20.11■□□□□ 0.81
CHFR-203ENST00000432561 TATP17735 454 aaPredicted RBP20.11■□□□□ 0.81
CHFR-203ENST00000432561 EPHA10Q5JZY3 1008 aa20.11■□□□□ 0.81
CHFR-203ENST00000432561 MYD88Q99836 296 aa20.11■□□□□ 0.81
CHFR-203ENST00000432561 SCN11AQ9UI33 1791 aa20.11■□□□□ 0.81
CHFR-203ENST00000432561 NASPP49321 788 aaPredicted RBP20.1■□□□□ 0.81
CHFR-203ENST00000432561 AK2P54819 239 aa20.1■□□□□ 0.81
CHFR-203ENST00000432561 TPRNQ4KMQ1 711 aa20.1■□□□□ 0.81
CHFR-203ENST00000432561 TMEM63CQ9P1W3 806 aa20.1■□□□□ 0.81
CHFR-203ENST00000432561 USP42Q9H9J4 1324 aaKnown RBP20.1■□□□□ 0.81
CHFR-203ENST00000432561 KIF1AQ12756 1690 aa20.09■□□□□ 0.81
CHFR-203ENST00000432561 CRYBG1Q9Y4K1 1723 aa20.09■□□□□ 0.81
CHFR-203ENST00000432561 CYP27B1O15528 508 aa20.09■□□□□ 0.81
CHFR-203ENST00000432561 ADCK5Q3MIX3 580 aa20.09■□□□□ 0.81
CHFR-203ENST00000432561 ADAMTS7Q9UKP4 1686 aa20.09■□□□□ 0.81
CHFR-203ENST00000432561 MST1RQ04912 1400 aa20.09■□□□□ 0.81
CHFR-203ENST00000432561 CASTP20810 708 aaKnown RBP20.08■□□□□ 0.81
CHFR-203ENST00000432561 PRIM1P49642 420 aaKnown RBP20.08■□□□□ 0.81
CHFR-203ENST00000432561 PRPF40BQ6NWY9 871 aaKnown RBP20.08■□□□□ 0.81
CHFR-203ENST00000432561 IL17RAQ96F46 866 aa20.08■□□□□ 0.81
CHFR-203ENST00000432561 INTS4Q96HW7 963 aaKnown RBP20.08■□□□□ 0.81
CHFR-203ENST00000432561 FAM227BQ96M60 508 aa20.08■□□□□ 0.81
CHFR-203ENST00000432561 NEURL1BA8MQ27 555 aa20.08■□□□□ 0.8
CHFR-203ENST00000432561 G3BP1Q13283 466 aaKnown RBP eCLIP20.08■□□□□ 0.8
CHFR-203ENST00000432561 LARGE1O95461 756 aa20.07■□□□□ 0.8
CHFR-203ENST00000432561 COL9A3Q14050 684 aaPredicted RBP20.07■□□□□ 0.8
CHFR-203ENST00000432561 RUFY3Q7L099 469 aa20.07■□□□□ 0.8
CHFR-203ENST00000432561 TTC14Q96N46 770 aa20.07■□□□□ 0.8
CHFR-203ENST00000432561 BOLA2Q9H3K6 86 aa20.07■□□□□ 0.8
CHFR-203ENST00000432561 STRCP1A6NGW2 1772 aa20.07■□□□□ 0.8
CHFR-203ENST00000432561 ZNF445P59923 1031 aa20.06■□□□□ 0.8
CHFR-203ENST00000432561 ERC1Q8IUD2 1116 aa20.06■□□□□ 0.8
CHFR-203ENST00000432561 RBSNQ9H1K0 784 aa20.06■□□□□ 0.8
CHFR-203ENST00000432561 SYCE3A1L190 88 aa20.06■□□□□ 0.8
CHFR-203ENST00000432561 ATP5J2-PTCD1G3V325 749 aa20.06■□□□□ 0.8
CHFR-203ENST00000432561 PTCD1O75127 700 aaKnown RBP20.06■□□□□ 0.8
CHFR-203ENST00000432561 GCKRQ14397 625 aa20.06■□□□□ 0.8
CHFR-203ENST00000432561 LARP1Q6PKG0 1096 aaKnown RBP20.06■□□□□ 0.8
CHFR-203ENST00000432561 IFNL2Q8IZJ0 200 aa20.06■□□□□ 0.8
CHFR-203ENST00000432561 EDC3Q96F86 508 aaKnown RBP20.06■□□□□ 0.8
CHFR-203ENST00000432561 UTYO14607 1347 aa20.06■□□□□ 0.8
CHFR-203ENST00000432561 HSPA2P54652 639 aa20.06■□□□□ 0.8
CHFR-203ENST00000432561 NEXNQ0ZGT2 675 aa20.06■□□□□ 0.8
CHFR-203ENST00000432561 TRIM44Q96DX7 344 aaPredicted RBP20.06■□□□□ 0.8
CHFR-203ENST00000432561 GPATCH3Q96I76 525 aa20.06■□□□□ 0.8
CHFR-203ENST00000432561 TTC5Q8N0Z6 440 aa20.05■□□□□ 0.8
CHFR-203ENST00000432561 NDUFB9Q9Y6M9 179 aa20.05■□□□□ 0.8
CHFR-203ENST00000432561 JAKMIP1Q96N16 626 aaKnown RBP20.05■□□□□ 0.8
CHFR-203ENST00000432561 GADD45BO75293 160 aaPredicted RBP20.04■□□□□ 0.8
CHFR-203ENST00000432561 COL18A1P39060 1754 aa20.04■□□□□ 0.8
CHFR-203ENST00000432561 RPAP1Q9BWH6 1393 aaPredicted RBP20.04■□□□□ 0.8
CHFR-203ENST00000432561 NMIQ13287 307 aaPredicted RBP20.04■□□□□ 0.8
CHFR-203ENST00000432561 ANKRD13DQ6ZTN6 518 aa20.04■□□□□ 0.8
CHFR-203ENST00000432561 EVI5LQ96CN4 794 aa20.04■□□□□ 0.8
CHFR-203ENST00000432561 LRP10Q7Z4F1 713 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms