RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 RAB3GAP1Q15042 981 aa13.72□□□□□ -0.21
CLDN4-202ENST00000431918 SSH3Q8TE77 659 aa13.72□□□□□ -0.21
CLDN4-202ENST00000431918 CPA1P15085 419 aa13.72□□□□□ -0.21
CLDN4-202ENST00000431918 SUCLG2Q96I99 432 aa13.72□□□□□ -0.21
CLDN4-202ENST00000431918 STK3Q13188 491 aa13.71□□□□□ -0.21
CLDN4-202ENST00000431918 PALD1Q9ULE6 856 aa13.71□□□□□ -0.21
CLDN4-202ENST00000431918 HOXB7P09629 217 aa13.71□□□□□ -0.21
CLDN4-202ENST00000431918 RNF20Q5VTR2 975 aa13.71□□□□□ -0.21
CLDN4-202ENST00000431918 TCEANC2Q96MN5 208 aa13.71□□□□□ -0.21
CLDN4-202ENST00000431918 SLC52A2Q9HAB3 445 aa13.71□□□□□ -0.21
CLDN4-202ENST00000431918 ERBB3P21860 1342 aa13.71□□□□□ -0.22
CLDN4-202ENST00000431918 PKP1Q13835 747 aa13.71□□□□□ -0.22
CLDN4-202ENST00000431918 CHAMP1Q96JM3 812 aa13.71□□□□□ -0.22
CLDN4-202ENST00000431918 KIF13AQ9H1H9 1805 aa13.7□□□□□ -0.22
CLDN4-202ENST00000431918 FIBPO43427 364 aa13.7□□□□□ -0.22
CLDN4-202ENST00000431918 ADGRL3Q9HAR2 1447 aa13.7□□□□□ -0.22
CLDN4-202ENST00000431918 IBTKQ9P2D0 1353 aaPredicted RBP13.7□□□□□ -0.22
CLDN4-202ENST00000431918 ZCRB1Q8TBF4 217 aaKnown RBP13.7□□□□□ -0.22
CLDN4-202ENST00000431918 CYP46A1Q9Y6A2 500 aa13.7□□□□□ -0.22
CLDN4-202ENST00000431918 ATP10DQ9P241 1426 aa13.7□□□□□ -0.22
CLDN4-202ENST00000431918 CCDC83Q8IWF9 413 aa13.7□□□□□ -0.22
CLDN4-202ENST00000431918 KIF2CQ99661 725 aa13.69□□□□□ -0.22
CLDN4-202ENST00000431918 NASPP49321 788 aaPredicted RBP13.69□□□□□ -0.22
CLDN4-202ENST00000431918 SYAP1Q96A49 352 aaPredicted RBP13.69□□□□□ -0.22
CLDN4-202ENST00000431918 DCAF5Q96JK2 942 aa13.69□□□□□ -0.22
CLDN4-202ENST00000431918 PDRG1Q9NUG6 133 aa13.69□□□□□ -0.22
CLDN4-202ENST00000431918 NDUFB9Q9Y6M9 179 aa13.69□□□□□ -0.22
CLDN4-202ENST00000431918 PHKG2P15735 406 aa13.69□□□□□ -0.22
CLDN4-202ENST00000431918 XRCC6P12956 609 aaKnown RBP eCLIP13.68□□□□□ -0.22
CLDN4-202ENST00000431918 WASHC4Q2M389 1173 aa13.68□□□□□ -0.22
CLDN4-202ENST00000431918 LMBR1LQ6UX01 489 aa13.68□□□□□ -0.22
CLDN4-202ENST00000431918 RBM27Q9P2N5 1060 aaKnown RBP13.68□□□□□ -0.22
CLDN4-202ENST00000431918 TMOD3Q9NYL9 352 aa13.68□□□□□ -0.22
CLDN4-202ENST00000431918 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.67□□□□□ -0.22
CLDN4-202ENST00000431918 NPHP1O15259 732 aa13.67□□□□□ -0.22
CLDN4-202ENST00000431918 FKBP4Q02790 459 aaKnown RBP eCLIP13.67□□□□□ -0.22
CLDN4-202ENST00000431918 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.67□□□□□ -0.22
CLDN4-202ENST00000431918 GPTP24298 496 aa13.67□□□□□ -0.22
CLDN4-202ENST00000431918 MSNP26038 577 aaKnown RBP13.67□□□□□ -0.22
CLDN4-202ENST00000431918 A1BGP04217 495 aa13.67□□□□□ -0.22
CLDN4-202ENST00000431918 EVI5LQ96CN4 794 aa13.67□□□□□ -0.22
CLDN4-202ENST00000431918 FER1L4A9Z1Z3 1794 aa13.67□□□□□ -0.22
CLDN4-202ENST00000431918 HIP1O00291 1037 aa13.66□□□□□ -0.22
CLDN4-202ENST00000431918 SSH2Q76I76 1423 aa13.66□□□□□ -0.22
CLDN4-202ENST00000431918 DDX46Q7L014 1031 aaKnown RBP13.66□□□□□ -0.22
CLDN4-202ENST00000431918 EDC3Q96F86 508 aaKnown RBP13.66□□□□□ -0.22
CLDN4-202ENST00000431918 NUTM2BA6NNL0 878 aaPredicted RBP13.66□□□□□ -0.22
CLDN4-202ENST00000431918 NUTM2EB1AL46 878 aaPredicted RBP13.66□□□□□ -0.22
CLDN4-202ENST00000431918 BLOC1S2Q6QNY1 142 aa13.66□□□□□ -0.22
CLDN4-202ENST00000431918 KIF6Q6ZMV9 814 aa13.66□□□□□ -0.22
CLDN4-202ENST00000431918 FERMT3Q86UX7 667 aa13.66□□□□□ -0.22
CLDN4-202ENST00000431918 NUTM2AQ8IVF1 878 aaPredicted RBP13.66□□□□□ -0.22
CLDN4-202ENST00000431918 CCDC57Q2TAC2 916 aa13.66□□□□□ -0.22
CLDN4-202ENST00000431918 FAM184AQ8NB25 1140 aa13.66□□□□□ -0.22
CLDN4-202ENST00000431918 OSBPL3Q9H4L5 887 aa13.66□□□□□ -0.22
CLDN4-202ENST00000431918 ARHGAP23Q9P227 1491 aa13.66□□□□□ -0.22
CLDN4-202ENST00000431918 H3BQV1 296 aa13.65□□□□□ -0.22
CLDN4-202ENST00000431918 IFFO2Q5TF58 517 aa13.65□□□□□ -0.22
CLDN4-202ENST00000431918 ADAMTS2O95450 1211 aa13.65□□□□□ -0.22
CLDN4-202ENST00000431918 NECAB1Q8N987 351 aa13.65□□□□□ -0.22
CLDN4-202ENST00000431918 NRKQ7Z2Y5 1582 aa13.65□□□□□ -0.22
CLDN4-202ENST00000431918 SYCE3A1L190 88 aa13.65□□□□□ -0.22
CLDN4-202ENST00000431918 PSMA5P28066 241 aa13.65□□□□□ -0.22
CLDN4-202ENST00000431918 GCKRQ14397 625 aa13.65□□□□□ -0.22
CLDN4-202ENST00000431918 FAM227BQ96M60 508 aa13.65□□□□□ -0.22
CLDN4-202ENST00000431918 SNRKQ9NRH2 765 aa13.65□□□□□ -0.22
CLDN4-202ENST00000431918 ATP6V1DQ9Y5K8 247 aa13.65□□□□□ -0.22
CLDN4-202ENST00000431918 RIMS1Q86UR5 1692 aaKnown RBP13.65□□□□□ -0.22
CLDN4-202ENST00000431918 SLIT1O75093 1534 aa13.64□□□□□ -0.23
CLDN4-202ENST00000431918 NMIQ13287 307 aaPredicted RBP13.64□□□□□ -0.23
CLDN4-202ENST00000431918 ARID3AQ99856 593 aa13.64□□□□□ -0.23
CLDN4-202ENST00000431918 WDR33Q9C0J8 1336 aaKnown RBP13.64□□□□□ -0.23
CLDN4-202ENST00000431918 RGS12O14924 1447 aa13.64□□□□□ -0.23
CLDN4-202ENST00000431918 APPP05067 770 aa13.64□□□□□ -0.23
CLDN4-202ENST00000431918 TFCP2Q12800 502 aa13.64□□□□□ -0.23
CLDN4-202ENST00000431918 EAF2Q96CJ1 260 aaPredicted RBP13.64□□□□□ -0.23
CLDN4-202ENST00000431918 METTL22Q9BUU2 404 aaPredicted RBP13.64□□□□□ -0.23
CLDN4-202ENST00000431918 SGSM2O43147 1006 aa13.64□□□□□ -0.23
CLDN4-202ENST00000431918 PPFIA3O75145 1194 aa13.64□□□□□ -0.23
CLDN4-202ENST00000431918 MPNDQ8N594 471 aa13.64□□□□□ -0.23
CLDN4-202ENST00000431918 CEP126Q9P2H0 1117 aa13.64□□□□□ -0.23
CLDN4-202ENST00000431918 LIMCH1Q9UPQ0 1083 aa13.64□□□□□ -0.23
CLDN4-202ENST00000431918 RBM8AQ9Y5S9 174 aaKnown RBP13.64□□□□□ -0.23
CLDN4-202ENST00000431918 NEURL1BA8MQ27 555 aa13.63□□□□□ -0.23
CLDN4-202ENST00000431918 DNTTIP2Q5QJE6 756 aaKnown RBP13.63□□□□□ -0.23
CLDN4-202ENST00000431918 CWC25Q9NXE8 425 aaPredicted RBP13.63□□□□□ -0.23
CLDN4-202ENST00000431918 MON2Q7Z3U7 1717 aa13.63□□□□□ -0.23
CLDN4-202ENST00000431918 C3P01024 1663 aa13.63□□□□□ -0.23
CLDN4-202ENST00000431918 GOLIM4O00461 696 aa13.63□□□□□ -0.23
CLDN4-202ENST00000431918 DLG5Q8TDM6 1919 aa13.63□□□□□ -0.23
CLDN4-202ENST00000431918 IL2RBP14784 551 aa13.63□□□□□ -0.23
CLDN4-202ENST00000431918 AK2P54819 239 aa13.63□□□□□ -0.23
CLDN4-202ENST00000431918 ANAPC15P60006 121 aa13.63□□□□□ -0.23
CLDN4-202ENST00000431918 TOMM22Q9NS69 142 aa13.63□□□□□ -0.23
CLDN4-202ENST00000431918 TTC41PQ6P2S7 1318 aa13.63□□□□□ -0.23
CLDN4-202ENST00000431918 CYP27B1O15528 508 aa13.62□□□□□ -0.23
CLDN4-202ENST00000431918 TLR7Q9NYK1 1049 aaKnown RBP13.62□□□□□ -0.23
CLDN4-202ENST00000431918 SLAIN2Q9P270 581 aa13.62□□□□□ -0.23
CLDN4-202ENST00000431918 STAP2Q9UGK3 403 aa13.62□□□□□ -0.23
CLDN4-202ENST00000431918 GTF2E1P29083 439 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms