RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 GAS2L2Q8NHY3 880 aa12.66□□□□□ -0.38
CDC42-IT1-201ENST00000431803 COL15A1P39059 1388 aa12.66□□□□□ -0.38
CDC42-IT1-201ENST00000431803 SENP3-EIF4A1A0A087X0R7 540 aa12.65□□□□□ -0.38
CDC42-IT1-201ENST00000431803 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
CDC42-IT1-201ENST00000431803 GNAT3A8MTJ3 354 aa12.65□□□□□ -0.38
CDC42-IT1-201ENST00000431803 POLRMTO00411 1230 aaKnown RBP12.65□□□□□ -0.38
CDC42-IT1-201ENST00000431803 KCNA3P22001 575 aa12.65□□□□□ -0.38
CDC42-IT1-201ENST00000431803 TM4SF1P30408 202 aa12.65□□□□□ -0.38
CDC42-IT1-201ENST00000431803 IL17REQ8NFR9 667 aa12.65□□□□□ -0.38
CDC42-IT1-201ENST00000431803 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
CDC42-IT1-201ENST00000431803 RSPH6AQ9H0K4 717 aa12.65□□□□□ -0.38
CDC42-IT1-201ENST00000431803 GPBP1L1Q9HC44 474 aaPredicted RBP12.65□□□□□ -0.38
CDC42-IT1-201ENST00000431803 BCS1LQ9Y276 419 aa12.65□□□□□ -0.38
CDC42-IT1-201ENST00000431803 ZBTB1Q9Y2K1 713 aa12.65□□□□□ -0.38
CDC42-IT1-201ENST00000431803 CEMIPQ8WUJ3 1361 aa12.65□□□□□ -0.38
CDC42-IT1-201ENST00000431803 ZPR1O75312 459 aa12.64□□□□□ -0.39
CDC42-IT1-201ENST00000431803 USPL1Q5W0Q7 1092 aa12.64□□□□□ -0.39
CDC42-IT1-201ENST00000431803 NARFQ9UHQ1 456 aa12.64□□□□□ -0.39
CDC42-IT1-201ENST00000431803 ARFGEF1Q9Y6D6 1849 aa12.64□□□□□ -0.39
CDC42-IT1-201ENST00000431803 NRXN2Q9P2S2 1712 aa12.63□□□□□ -0.39
CDC42-IT1-201ENST00000431803 RGL2O15211 777 aa12.63□□□□□ -0.39
CDC42-IT1-201ENST00000431803 TEFQ10587 303 aa12.63□□□□□ -0.39
CDC42-IT1-201ENST00000431803 ZNF790Q6PG37 636 aa12.63□□□□□ -0.39
CDC42-IT1-201ENST00000431803 MAMSTRQ6ZN01 415 aa12.63□□□□□ -0.39
CDC42-IT1-201ENST00000431803 TTC5Q8N0Z6 440 aa12.63□□□□□ -0.39
CDC42-IT1-201ENST00000431803 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
CDC42-IT1-201ENST00000431803 PHACTR3Q96KR7 559 aa12.63□□□□□ -0.39
CDC42-IT1-201ENST00000431803 CFAP53Q96M91 514 aa12.63□□□□□ -0.39
CDC42-IT1-201ENST00000431803 HEG1Q9ULI3 1381 aa12.62□□□□□ -0.39
CDC42-IT1-201ENST00000431803 FCHSD2O94868 740 aa12.62□□□□□ -0.39
CDC42-IT1-201ENST00000431803 PPP2R1AP30153 589 aa12.62□□□□□ -0.39
CDC42-IT1-201ENST00000431803 PRKAR2BP31323 418 aa12.62□□□□□ -0.39
CDC42-IT1-201ENST00000431803 BCL2L12Q9HB09 334 aa12.62□□□□□ -0.39
CDC42-IT1-201ENST00000431803 AFDNP55196 1824 aaKnown RBP12.61□□□□□ -0.39
CDC42-IT1-201ENST00000431803 STARD3NLO95772 234 aa12.61□□□□□ -0.39
CDC42-IT1-201ENST00000431803 EIF5P55010 431 aaKnown RBP12.61□□□□□ -0.39
CDC42-IT1-201ENST00000431803 NFIXQ14938 502 aa12.61□□□□□ -0.39
CDC42-IT1-201ENST00000431803 ZNF526Q8TF50 670 aaPredicted RBP12.61□□□□□ -0.39
CDC42-IT1-201ENST00000431803 SCUBE2Q9NQ36 999 aa12.61□□□□□ -0.39
CDC42-IT1-201ENST00000431803 PIM2Q9P1W9 311 aa12.61□□□□□ -0.39
CDC42-IT1-201ENST00000431803 TAOK2Q9UL54 1235 aa12.61□□□□□ -0.39
CDC42-IT1-201ENST00000431803 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
CDC42-IT1-201ENST00000431803 CANXP27824 592 aaKnown RBP12.6□□□□□ -0.39
CDC42-IT1-201ENST00000431803 DALRD3Q5D0E6 543 aaKnown RBP12.6□□□□□ -0.39
CDC42-IT1-201ENST00000431803 TEX13AQ9BXU3 409 aaPredicted RBP12.6□□□□□ -0.39
CDC42-IT1-201ENST00000431803 NUDCQ9Y266 331 aa12.6□□□□□ -0.39
CDC42-IT1-201ENST00000431803 CHRNA5P30532 468 aa12.59□□□□□ -0.39
CDC42-IT1-201ENST00000431803 ARHGAP27Q6ZUM4 889 aa12.59□□□□□ -0.39
CDC42-IT1-201ENST00000431803 PDCD7Q8N8D1 485 aaKnown RBP12.59□□□□□ -0.39
CDC42-IT1-201ENST00000431803 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
CDC42-IT1-201ENST00000431803 DLEC1Q9Y238 1755 aa12.58□□□□□ -0.39
CDC42-IT1-201ENST00000431803 A0A087WZG4 1122 aa12.58□□□□□ -0.4
CDC42-IT1-201ENST00000431803 KIF3CO14782 793 aa12.58□□□□□ -0.4
CDC42-IT1-201ENST00000431803 U2AF1L5P0DN76 240 aaPredicted RBP12.58□□□□□ -0.4
CDC42-IT1-201ENST00000431803 U2AF1Q01081 240 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDC42-IT1-201ENST00000431803 EFCAB3Q8N7B9 438 aa12.58□□□□□ -0.4
CDC42-IT1-201ENST00000431803 CARMIL3Q8ND23 1372 aa12.57□□□□□ -0.4
CDC42-IT1-201ENST00000431803 BTBD11A6QL63 1104 aa12.57□□□□□ -0.4
CDC42-IT1-201ENST00000431803 KCNQ3O43525 872 aa12.57□□□□□ -0.4
CDC42-IT1-201ENST00000431803 SERPINB2P05120 415 aa12.57□□□□□ -0.4
CDC42-IT1-201ENST00000431803 IL6STP40189 918 aaPredicted RBP12.57□□□□□ -0.4
CDC42-IT1-201ENST00000431803 C9orf131Q5VYM1 1079 aa12.56□□□□□ -0.4
CDC42-IT1-201ENST00000431803 HTATSF1O43719 755 aaKnown RBP12.55□□□□□ -0.4
CDC42-IT1-201ENST00000431803 TBC1D9BQ66K14 1250 aa12.55□□□□□ -0.4
CDC42-IT1-201ENST00000431803 MCM10Q7L590 875 aa12.55□□□□□ -0.4
CDC42-IT1-201ENST00000431803 BCORQ6W2J9 1755 aa12.55□□□□□ -0.4
CDC42-IT1-201ENST00000431803 CAMTA2O94983 1202 aa12.54□□□□□ -0.4
CDC42-IT1-201ENST00000431803 A1BGP04217 495 aa12.54□□□□□ -0.4
CDC42-IT1-201ENST00000431803 HSPA6P17066 643 aa12.54□□□□□ -0.4
CDC42-IT1-201ENST00000431803 RTF1Q92541 710 aaKnown RBP12.54□□□□□ -0.4
CDC42-IT1-201ENST00000431803 TBC1D2BQ9UPU7 963 aa12.54□□□□□ -0.4
CDC42-IT1-201ENST00000431803 ANKRD31Q8N7Z5 1873 aa12.54□□□□□ -0.4
CDC42-IT1-201ENST00000431803 SBF1O95248 1867 aa12.53□□□□□ -0.4
CDC42-IT1-201ENST00000431803 BICDL1Q6ZP65 573 aa12.53□□□□□ -0.4
CDC42-IT1-201ENST00000431803 ZNF330Q9Y3S2 320 aaPredicted RBP12.53□□□□□ -0.4
CDC42-IT1-201ENST00000431803 USP16Q9Y5T5 823 aa12.53□□□□□ -0.4
CDC42-IT1-201ENST00000431803 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
CDC42-IT1-201ENST00000431803 COL11A2P13942 1736 aaPredicted RBP12.53□□□□□ -0.4
CDC42-IT1-201ENST00000431803 PRAMEF22A3QJZ6 481 aa12.52□□□□□ -0.41
CDC42-IT1-201ENST00000431803 STK25O00506 426 aa12.52□□□□□ -0.41
CDC42-IT1-201ENST00000431803 SNRPA1P09661 255 aaKnown RBP12.52□□□□□ -0.41
CDC42-IT1-201ENST00000431803 DCTN1Q14203 1278 aa12.52□□□□□ -0.41
CDC42-IT1-201ENST00000431803 PRR5LQ6MZQ0 368 aa12.52□□□□□ -0.41
CDC42-IT1-201ENST00000431803 C2CD5Q86YS7 1000 aa12.52□□□□□ -0.41
CDC42-IT1-201ENST00000431803 TTLL6Q8N841 843 aa12.52□□□□□ -0.41
CDC42-IT1-201ENST00000431803 NMRK2Q9NPI5 230 aa12.52□□□□□ -0.41
CDC42-IT1-201ENST00000431803 RNF181Q9P0P0 153 aa12.52□□□□□ -0.41
CDC42-IT1-201ENST00000431803 H0YIN7 160 aa12.51□□□□□ -0.41
CDC42-IT1-201ENST00000431803 TOMM70O94826 608 aa12.51□□□□□ -0.41
CDC42-IT1-201ENST00000431803 DZIP3Q86Y13 1208 aaKnown RBP12.51□□□□□ -0.41
CDC42-IT1-201ENST00000431803 PLEKHF1Q96S99 279 aa12.51□□□□□ -0.41
CDC42-IT1-201ENST00000431803 BRIP1Q9BX63 1249 aa12.51□□□□□ -0.41
CDC42-IT1-201ENST00000431803 ZC3H4Q9UPT8 1303 aaKnown RBP12.51□□□□□ -0.41
CDC42-IT1-201ENST00000431803 PDE6BP35913 854 aa12.5□□□□□ -0.41
CDC42-IT1-201ENST00000431803 PIP4K2AP48426 406 aaPredicted RBP12.5□□□□□ -0.41
CDC42-IT1-201ENST00000431803 PRELPP51888 382 aa12.5□□□□□ -0.41
CDC42-IT1-201ENST00000431803 RASSF7Q02833 373 aa12.5□□□□□ -0.41
CDC42-IT1-201ENST00000431803 TAF7Q15545 349 aaPredicted RBP12.5□□□□□ -0.41
CDC42-IT1-201ENST00000431803 NPM2Q86SE8 214 aaKnown RBP12.5□□□□□ -0.41
CDC42-IT1-201ENST00000431803 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms