RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 GLTPD2A6NH11 291 aa18.47■□□□□ 0.55
SEC13-211ENST00000431352 FAM177BA6PVY3 158 aa18.47■□□□□ 0.55
SEC13-211ENST00000431352 NBPF26B4DH59 902 aa18.47■□□□□ 0.55
SEC13-211ENST00000431352 IFFO2Q5TF58 517 aa18.47■□□□□ 0.55
SEC13-211ENST00000431352 PRPF40BQ6NWY9 871 aaKnown RBP18.47■□□□□ 0.55
SEC13-211ENST00000431352 NBPF10Q6P3W6 841 aaKnown RBP18.47■□□□□ 0.55
SEC13-211ENST00000431352 NBPF15Q8N660 670 aa18.47■□□□□ 0.55
SEC13-211ENST00000431352 DNAJC5GQ8N7S2 189 aa18.47■□□□□ 0.55
SEC13-211ENST00000431352 SMC1BQ8NDV3 1235 aa18.47■□□□□ 0.55
SEC13-211ENST00000431352 CCDC88AQ3V6T2 1871 aa18.47■□□□□ 0.55
SEC13-211ENST00000431352 HTATSF1O43719 755 aaKnown RBP18.46■□□□□ 0.55
SEC13-211ENST00000431352 TAF7Q15545 349 aaPredicted RBP18.46■□□□□ 0.55
SEC13-211ENST00000431352 ERFEQ4G0M1 354 aa18.46■□□□□ 0.55
SEC13-211ENST00000431352 CNKSR1Q969H4 720 aa18.46■□□□□ 0.55
SEC13-211ENST00000431352 TAOK3Q9H2K8 898 aa18.46■□□□□ 0.55
SEC13-211ENST00000431352 SRGNP10124 158 aa18.45■□□□□ 0.54
SEC13-211ENST00000431352 VEGFAP15692 232 aaPredicted RBP18.45■□□□□ 0.54
SEC13-211ENST00000431352 STYK1Q6J9G0 422 aa18.45■□□□□ 0.54
SEC13-211ENST00000431352 NGEFQ8N5V2 710 aa18.45■□□□□ 0.54
SEC13-211ENST00000431352 NIP7Q9Y221 180 aaKnown RBP eCLIP18.45■□□□□ 0.54
SEC13-211ENST00000431352 LAMB4A4D0S4 1761 aa18.45■□□□□ 0.54
SEC13-211ENST00000431352 SLX4Q8IY92 1834 aa18.44■□□□□ 0.54
SEC13-211ENST00000431352 MASTLQ96GX5 879 aa18.44■□□□□ 0.54
SEC13-211ENST00000431352 THUMPD2Q9BTF0 503 aaKnown RBP18.44■□□□□ 0.54
SEC13-211ENST00000431352 FER1L6Q2WGJ9 1857 aa18.43■□□□□ 0.54
SEC13-211ENST00000431352 CLEC4GQ6UXB4 293 aa18.43■□□□□ 0.54
SEC13-211ENST00000431352 DLG5Q8TDM6 1919 aa18.43■□□□□ 0.54
SEC13-211ENST00000431352 HLFQ16534 295 aa18.42■□□□□ 0.54
SEC13-211ENST00000431352 DPY19L2Q6NUT2 758 aa18.42■□□□□ 0.54
SEC13-211ENST00000431352 KLRG1Q96E93 195 aa18.42■□□□□ 0.54
SEC13-211ENST00000431352 ARFGEF2Q9Y6D5 1785 aa18.41■□□□□ 0.54
SEC13-211ENST00000431352 NFE2L2Q16236 605 aa18.41■□□□□ 0.54
SEC13-211ENST00000431352 LTBP3Q9NS15 1303 aa18.41■□□□□ 0.54
SEC13-211ENST00000431352 MAPK8IP3Q9UPT6 1336 aa18.41■□□□□ 0.54
SEC13-211ENST00000431352 KDM3BQ7LBC6 1761 aa18.4■□□□□ 0.54
SEC13-211ENST00000431352 NPR1P16066 1061 aa18.4■□□□□ 0.54
SEC13-211ENST00000431352 GTF2E1P29083 439 aaPredicted RBP18.4■□□□□ 0.54
SEC13-211ENST00000431352 SOGA3Q5TF21 947 aa18.4■□□□□ 0.54
SEC13-211ENST00000431352 TPTE2Q6XPS3 522 aa18.4■□□□□ 0.54
SEC13-211ENST00000431352 CCDC93Q567U6 631 aa18.39■□□□□ 0.53
SEC13-211ENST00000431352 OLFM4Q6UX06 510 aa18.39■□□□□ 0.53
SEC13-211ENST00000431352 PNISRQ8TF01 805 aaKnown RBP18.39■□□□□ 0.53
SEC13-211ENST00000431352 PLEKHF1Q96S99 279 aa18.39■□□□□ 0.53
SEC13-211ENST00000431352 RRP7AQ9Y3A4 280 aaKnown RBP18.39■□□□□ 0.53
SEC13-211ENST00000431352 DICER1Q9UPY3 1922 aaKnown RBP18.39■□□□□ 0.53
SEC13-211ENST00000431352 POTECB2RU33 542 aa18.38■□□□□ 0.53
SEC13-211ENST00000431352 MYL6BP14649 208 aa18.38■□□□□ 0.53
SEC13-211ENST00000431352 KIF6Q6ZMV9 814 aa18.38■□□□□ 0.53
SEC13-211ENST00000431352 DDNO94850 711 aaPredicted RBP18.37■□□□□ 0.53
SEC13-211ENST00000431352 EIF4A1P60842 406 aaKnown RBP18.37■□□□□ 0.53
SEC13-211ENST00000431352 NUTM1Q86Y26 1132 aa18.37■□□□□ 0.53
SEC13-211ENST00000431352 ABCC12Q96J65 1359 aa18.37■□□□□ 0.53
SEC13-211ENST00000431352 GPTP24298 496 aa18.36■□□□□ 0.53
SEC13-211ENST00000431352 TTLL7Q6ZT98 887 aa18.36■□□□□ 0.53
SEC13-211ENST00000431352 ZBTB3Q9H5J0 574 aa18.36■□□□□ 0.53
SEC13-211ENST00000431352 ZNF277Q9NRM2 450 aaPredicted RBP18.36■□□□□ 0.53
SEC13-211ENST00000431352 MAP3K15Q6ZN16 1313 aa18.35■□□□□ 0.53
SEC13-211ENST00000431352 RGL2O15211 777 aa18.35■□□□□ 0.53
SEC13-211ENST00000431352 C7orf43Q8WVR3 580 aa18.35■□□□□ 0.53
SEC13-211ENST00000431352 KLRG2A4D1S0 409 aaPredicted RBP18.34■□□□□ 0.53
SEC13-211ENST00000431352 POTEIP0CG38 1075 aa18.34■□□□□ 0.53
SEC13-211ENST00000431352 POTEJP0CG39 1038 aa18.34■□□□□ 0.53
SEC13-211ENST00000431352 PNNQ9H307 717 aaKnown RBP18.34■□□□□ 0.53
SEC13-211ENST00000431352 TSPYL4Q9UJ04 414 aa18.34■□□□□ 0.53
SEC13-211ENST00000431352 FKBP4Q02790 459 aaKnown RBP eCLIP18.33■□□□□ 0.52
SEC13-211ENST00000431352 JMYQ8N9B5 988 aa18.33■□□□□ 0.52
SEC13-211ENST00000431352 NYXQ9GZU5 481 aa18.33■□□□□ 0.52
SEC13-211ENST00000431352 UBN2Q6ZU65 1347 aa18.32■□□□□ 0.52
SEC13-211ENST00000431352 ZNF541Q9H0D2 1346 aa18.32■□□□□ 0.52
SEC13-211ENST00000431352 ERVV-1B6SEH8 477 aa18.32■□□□□ 0.52
SEC13-211ENST00000431352 CHADLQ6NUI6 762 aa18.32■□□□□ 0.52
SEC13-211ENST00000431352 NUP98P52948 1817 aa18.31■□□□□ 0.52
SEC13-211ENST00000431352 ALDH1B1P30837 517 aa18.31■□□□□ 0.52
SEC13-211ENST00000431352 RIPK4P57078 832 aa18.31■□□□□ 0.52
SEC13-211ENST00000431352 RPGRQ92834 1020 aaKnown RBP18.31■□□□□ 0.52
SEC13-211ENST00000431352 EIF2S2P20042 333 aaKnown RBP18.3■□□□□ 0.52
SEC13-211ENST00000431352 RTKN2Q8IZC4 609 aa18.3■□□□□ 0.52
SEC13-211ENST00000431352 IQCA1LA6NCM1 817 aa18.29■□□□□ 0.52
SEC13-211ENST00000431352 ANXA1P04083 346 aa18.29■□□□□ 0.52
SEC13-211ENST00000431352 IARSP41252 1262 aaKnown RBP18.29■□□□□ 0.52
SEC13-211ENST00000431352 CRY2Q49AN0 593 aa18.29■□□□□ 0.52
SEC13-211ENST00000431352 SUSD4Q5VX71 490 aa18.29■□□□□ 0.52
SEC13-211ENST00000431352 SYNE4Q8N205 404 aa18.29■□□□□ 0.52
SEC13-211ENST00000431352 TCERG1O14776 1098 aaKnown RBP18.28■□□□□ 0.52
SEC13-211ENST00000431352 RALBP1Q15311 655 aa18.28■□□□□ 0.52
SEC13-211ENST00000431352 EAPPQ56P03 285 aaPredicted RBP18.28■□□□□ 0.52
SEC13-211ENST00000431352 SLC51AQ86UW1 340 aa18.28■□□□□ 0.52
SEC13-211ENST00000431352 CCDC146Q8IYE0 955 aa18.28■□□□□ 0.52
SEC13-211ENST00000431352 NECTIN2Q92692 538 aa18.28■□□□□ 0.52
SEC13-211ENST00000431352 IBTKQ9P2D0 1353 aaPredicted RBP18.28■□□□□ 0.52
SEC13-211ENST00000431352 PROSER3Q2NL68 480 aa18.27■□□□□ 0.52
SEC13-211ENST00000431352 COL13A1Q5TAT6 717 aaPredicted RBP18.27■□□□□ 0.52
SEC13-211ENST00000431352 L3MBTL3Q96JM7 780 aaPredicted RBP18.27■□□□□ 0.52
SEC13-211ENST00000431352 TAF1DQ9H5J8 278 aaPredicted RBP18.27■□□□□ 0.52
SEC13-211ENST00000431352 ERBB4Q15303 1308 aa18.26■□□□□ 0.51
SEC13-211ENST00000431352 TMPOP42166 694 aaKnown RBP18.26■□□□□ 0.51
SEC13-211ENST00000431352 DDX10Q13206 875 aaKnown RBP18.26■□□□□ 0.51
SEC13-211ENST00000431352 NEUROD2Q15784 382 aa18.26■□□□□ 0.51
SEC13-211ENST00000431352 GIGYF2Q6Y7W6 1299 aaKnown RBP18.26■□□□□ 0.51
SEC13-211ENST00000431352 C3orf67Q6ZVT6 689 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms