RNA–Protein interactions for RNA: ENST00000431243.6

MTHFR-209, Transcript of methylenetetrahydrofolate reductase, humanhuman

TSL 1 (best)

Gene MTHFR, Length 1,116 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-209ENST00000431243 SRGNP10124 158 aa12.93□□□□□ -0.34
MTHFR-209ENST00000431243 ST5P78524 1137 aa12.93□□□□□ -0.34
MTHFR-209ENST00000431243 MASTLQ96GX5 879 aa12.93□□□□□ -0.34
MTHFR-209ENST00000431243 FER1L6Q2WGJ9 1857 aa12.93□□□□□ -0.34
MTHFR-209ENST00000431243 CCDC88AQ3V6T2 1871 aa12.93□□□□□ -0.34
MTHFR-209ENST00000431243 DICER1Q9UPY3 1922 aaKnown RBP12.92□□□□□ -0.34
MTHFR-209ENST00000431243 A1BGP04217 495 aa12.92□□□□□ -0.34
MTHFR-209ENST00000431243 PRPF40BQ6NWY9 871 aaKnown RBP12.92□□□□□ -0.34
MTHFR-209ENST00000431243 ANKRD31Q8N7Z5 1873 aa12.92□□□□□ -0.34
MTHFR-209ENST00000431243 L3MBTL3Q96JM7 780 aaPredicted RBP12.92□□□□□ -0.34
MTHFR-209ENST00000431243 SCN7AQ01118 1682 aa12.92□□□□□ -0.34
MTHFR-209ENST00000431243 KLRG2A4D1S0 409 aaPredicted RBP12.91□□□□□ -0.34
MTHFR-209ENST00000431243 NPHP1O15259 732 aa12.91□□□□□ -0.34
MTHFR-209ENST00000431243 PLCB2Q00722 1185 aa12.91□□□□□ -0.34
MTHFR-209ENST00000431243 C7orf43Q8WVR3 580 aa12.91□□□□□ -0.34
MTHFR-209ENST00000431243 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
MTHFR-209ENST00000431243 BTBD11A6QL63 1104 aa12.9□□□□□ -0.34
MTHFR-209ENST00000431243 U2SURPO15042 1029 aaKnown RBP12.9□□□□□ -0.34
MTHFR-209ENST00000431243 LDHDQ86WU2 507 aa12.9□□□□□ -0.34
MTHFR-209ENST00000431243 DZIP3Q86Y13 1208 aaKnown RBP12.9□□□□□ -0.34
MTHFR-209ENST00000431243 ZNF219Q9P2Y4 722 aaPredicted RBP12.9□□□□□ -0.34
MTHFR-209ENST00000431243 ZNF652Q9Y2D9 606 aa12.9□□□□□ -0.34
MTHFR-209ENST00000431243 ZNF330Q9Y3S2 320 aaPredicted RBP12.9□□□□□ -0.34
MTHFR-209ENST00000431243 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
MTHFR-209ENST00000431243 CAPN15O75808 1086 aa12.89□□□□□ -0.35
MTHFR-209ENST00000431243 DDNO94850 711 aaPredicted RBP12.89□□□□□ -0.35
MTHFR-209ENST00000431243 NPR1P16066 1061 aa12.89□□□□□ -0.35
MTHFR-209ENST00000431243 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
MTHFR-209ENST00000431243 RALBP1Q15311 655 aa12.89□□□□□ -0.35
MTHFR-209ENST00000431243 CCDC93Q567U6 631 aa12.89□□□□□ -0.35
MTHFR-209ENST00000431243 NBPF5PQ86XG9 351 aaPredicted RBP12.89□□□□□ -0.35
MTHFR-209ENST00000431243 CFAP53Q96M91 514 aa12.89□□□□□ -0.35
MTHFR-209ENST00000431243 PASKQ96RG2 1323 aa12.88□□□□□ -0.35
MTHFR-209ENST00000431243 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
MTHFR-209ENST00000431243 SNRPA1P09661 255 aaKnown RBP12.88□□□□□ -0.35
MTHFR-209ENST00000431243 TPTE2Q6XPS3 522 aa12.88□□□□□ -0.35
MTHFR-209ENST00000431243 RTKN2Q8IZC4 609 aa12.88□□□□□ -0.35
MTHFR-209ENST00000431243 CCDC24Q8N4L8 307 aa12.88□□□□□ -0.35
MTHFR-209ENST00000431243 TAF1DQ9H5J8 278 aaPredicted RBP12.88□□□□□ -0.35
MTHFR-209ENST00000431243 TAOK2Q9UL54 1235 aa12.88□□□□□ -0.35
MTHFR-209ENST00000431243 USP16Q9Y5T5 823 aa12.88□□□□□ -0.35
MTHFR-209ENST00000431243 CNTNAP1P78357 1384 aa12.88□□□□□ -0.35
MTHFR-209ENST00000431243 SLX4Q8IY92 1834 aa12.88□□□□□ -0.35
MTHFR-209ENST00000431243 FKBP4Q02790 459 aaKnown RBP eCLIP12.87□□□□□ -0.35
MTHFR-209ENST00000431243 PRDM10Q9NQV6 1147 aa12.87□□□□□ -0.35
MTHFR-209ENST00000431243 ARFGEF2Q9Y6D5 1785 aa12.86□□□□□ -0.35
MTHFR-209ENST00000431243 SCN4AP35499 1836 aa12.86□□□□□ -0.35
MTHFR-209ENST00000431243 HTATSF1O43719 755 aaKnown RBP12.86□□□□□ -0.35
MTHFR-209ENST00000431243 POTEIP0CG38 1075 aa12.86□□□□□ -0.35
MTHFR-209ENST00000431243 POTEJP0CG39 1038 aa12.86□□□□□ -0.35
MTHFR-209ENST00000431243 PHACTR3Q96KR7 559 aa12.86□□□□□ -0.35
MTHFR-209ENST00000431243 RSPH6AQ9H0K4 717 aa12.86□□□□□ -0.35
MTHFR-209ENST00000431243 MKRN1Q9UHC7 482 aaKnown RBP12.86□□□□□ -0.35
MTHFR-209ENST00000431243 NUDCQ9Y266 331 aa12.86□□□□□ -0.35
MTHFR-209ENST00000431243 TMEM88BA6NKF7 163 aa12.85□□□□□ -0.35
MTHFR-209ENST00000431243 ANP32CO43423 234 aa12.85□□□□□ -0.35
MTHFR-209ENST00000431243 KCNQ3O43525 872 aa12.85□□□□□ -0.35
MTHFR-209ENST00000431243 ITGBL1O95965 494 aaPredicted RBP12.85□□□□□ -0.35
MTHFR-209ENST00000431243 ALDH1B1P30837 517 aa12.85□□□□□ -0.35
MTHFR-209ENST00000431243 PRKAR2BP31323 418 aa12.85□□□□□ -0.35
MTHFR-209ENST00000431243 PNMA8AQ86V59 439 aaPredicted RBP12.85□□□□□ -0.35
MTHFR-209ENST00000431243 CNKSR2Q8WXI2 1034 aa12.85□□□□□ -0.35
MTHFR-209ENST00000431243 RTF1Q92541 710 aaKnown RBP12.85□□□□□ -0.35
MTHFR-209ENST00000431243 HACL1Q9UJ83 578 aa12.85□□□□□ -0.35
MTHFR-209ENST00000431243 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
MTHFR-209ENST00000431243 CTCFP49711 727 aaPredicted RBP12.84□□□□□ -0.35
MTHFR-209ENST00000431243 GRIPAP1Q4V328 841 aa12.84□□□□□ -0.35
MTHFR-209ENST00000431243 NIP7Q9Y221 180 aaKnown RBP eCLIP12.84□□□□□ -0.35
MTHFR-209ENST00000431243 FZD9O00144 591 aa12.83□□□□□ -0.36
MTHFR-209ENST00000431243 CC2D2BQ6DHV5 1058 aa12.83□□□□□ -0.36
MTHFR-209ENST00000431243 AIDAQ96BJ3 306 aa12.83□□□□□ -0.36
MTHFR-209ENST00000431243 PSMD1Q99460 953 aa12.83□□□□□ -0.36
MTHFR-209ENST00000431243 PRKRIP1Q9H875 184 aaPredicted RBP12.83□□□□□ -0.36
MTHFR-209ENST00000431243 NBPF26B4DH59 902 aa12.82□□□□□ -0.36
MTHFR-209ENST00000431243 FOXN1O15353 648 aa12.82□□□□□ -0.36
MTHFR-209ENST00000431243 EPHX2P34913 555 aa12.82□□□□□ -0.36
MTHFR-209ENST00000431243 VEGFBP49765 207 aa12.82□□□□□ -0.36
MTHFR-209ENST00000431243 CRY2Q49AN0 593 aa12.82□□□□□ -0.36
MTHFR-209ENST00000431243 NBPF10Q6P3W6 841 aaKnown RBP12.82□□□□□ -0.36
MTHFR-209ENST00000431243 GPC2Q8N158 579 aa12.82□□□□□ -0.36
MTHFR-209ENST00000431243 NBPF15Q8N660 670 aa12.82□□□□□ -0.36
MTHFR-209ENST00000431243 ZNF277Q9NRM2 450 aaPredicted RBP12.82□□□□□ -0.36
MTHFR-209ENST00000431243 WBP1LQ9NX94 342 aa12.82□□□□□ -0.36
MTHFR-209ENST00000431243 MYBBP1AQ9BQG0 1328 aaKnown RBP12.82□□□□□ -0.36
MTHFR-209ENST00000431243 PRAMEF22A3QJZ6 481 aa12.81□□□□□ -0.36
MTHFR-209ENST00000431243 RASSF10A6NK89 507 aa12.81□□□□□ -0.36
MTHFR-209ENST00000431243 ERVV-1B6SEH8 477 aa12.81□□□□□ -0.36
MTHFR-209ENST00000431243 U2AF1L5P0DN76 240 aaPredicted RBP12.81□□□□□ -0.36
MTHFR-209ENST00000431243 IARSP41252 1262 aaKnown RBP12.81□□□□□ -0.36
MTHFR-209ENST00000431243 U2AF1Q01081 240 aaKnown RBP eCLIP12.81□□□□□ -0.36
MTHFR-209ENST00000431243 TAF7Q15545 349 aaPredicted RBP12.81□□□□□ -0.36
MTHFR-209ENST00000431243 EAPPQ56P03 285 aaPredicted RBP12.81□□□□□ -0.36
MTHFR-209ENST00000431243 NYXQ9GZU5 481 aa12.81□□□□□ -0.36
MTHFR-209ENST00000431243 ZNF541Q9H0D2 1346 aa12.81□□□□□ -0.36
MTHFR-209ENST00000431243 GTF2E1P29083 439 aaPredicted RBP12.8□□□□□ -0.36
MTHFR-209ENST00000431243 PIP4K2AP48426 406 aaPredicted RBP12.8□□□□□ -0.36
MTHFR-209ENST00000431243 MCM10Q7L590 875 aa12.8□□□□□ -0.36
MTHFR-209ENST00000431243 CNTROBQ8N137 903 aa12.8□□□□□ -0.36
MTHFR-209ENST00000431243 SYNE4Q8N205 404 aa12.8□□□□□ -0.36
MTHFR-209ENST00000431243 JDP2Q8WYK2 163 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms