RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 CALD1Q05682 793 aaKnown RBP11.93□□□□□ -0.5
HDAC9-211ENST00000430454 STYK1Q6J9G0 422 aa11.93□□□□□ -0.5
HDAC9-211ENST00000430454 PRKRIP1Q9H875 184 aaPredicted RBP11.93□□□□□ -0.5
HDAC9-211ENST00000430454 NRXN2Q9P2S2 1712 aa11.93□□□□□ -0.5
HDAC9-211ENST00000430454 ARFGEF1Q9Y6D6 1849 aa11.93□□□□□ -0.5
HDAC9-211ENST00000430454 NBPF26B4DH59 902 aa11.92□□□□□ -0.5
HDAC9-211ENST00000430454 PIP4K2AP48426 406 aaPredicted RBP11.92□□□□□ -0.5
HDAC9-211ENST00000430454 NBPF10Q6P3W6 841 aaKnown RBP11.92□□□□□ -0.5
HDAC9-211ENST00000430454 NBPF15Q8N660 670 aa11.92□□□□□ -0.5
HDAC9-211ENST00000430454 MASTLQ96GX5 879 aa11.92□□□□□ -0.5
HDAC9-211ENST00000430454 THUMPD2Q9BTF0 503 aaKnown RBP11.92□□□□□ -0.5
HDAC9-211ENST00000430454 CHMP4AQ9BY43 222 aa11.92□□□□□ -0.5
HDAC9-211ENST00000430454 RRP7AQ9Y3A4 280 aaKnown RBP11.92□□□□□ -0.5
HDAC9-211ENST00000430454 BRCA1P38398 1863 aaKnown RBP11.91□□□□□ -0.5
HDAC9-211ENST00000430454 AFDNP55196 1824 aaKnown RBP11.91□□□□□ -0.5
HDAC9-211ENST00000430454 MYL6BP14649 208 aa11.91□□□□□ -0.5
HDAC9-211ENST00000430454 NEUROD2Q15784 382 aa11.91□□□□□ -0.5
HDAC9-211ENST00000430454 CCDC146Q8IYE0 955 aa11.91□□□□□ -0.5
HDAC9-211ENST00000430454 NGEFQ8N5V2 710 aa11.91□□□□□ -0.5
HDAC9-211ENST00000430454 MAP3K15Q6ZN16 1313 aa11.9□□□□□ -0.5
HDAC9-211ENST00000430454 DLG5Q8TDM6 1919 aa11.9□□□□□ -0.5
HDAC9-211ENST00000430454 TOMM70O94826 608 aa11.9□□□□□ -0.5
HDAC9-211ENST00000430454 SRGNP10124 158 aa11.9□□□□□ -0.5
HDAC9-211ENST00000430454 NPR1P16066 1061 aa11.9□□□□□ -0.5
HDAC9-211ENST00000430454 ALDH1B1P30837 517 aa11.9□□□□□ -0.5
HDAC9-211ENST00000430454 ADAMTS8Q9UP79 889 aa11.9□□□□□ -0.5
HDAC9-211ENST00000430454 LAMB4A4D0S4 1761 aa11.9□□□□□ -0.51
HDAC9-211ENST00000430454 EIF2S2P20042 333 aaKnown RBP11.89□□□□□ -0.51
HDAC9-211ENST00000430454 PARP10Q53GL7 1025 aa11.89□□□□□ -0.51
HDAC9-211ENST00000430454 HSP90AB3PQ58FF7 597 aa11.89□□□□□ -0.51
HDAC9-211ENST00000430454 DPY19L2Q6NUT2 758 aa11.89□□□□□ -0.51
HDAC9-211ENST00000430454 PPP1R42Q7Z4L9 355 aa11.89□□□□□ -0.51
HDAC9-211ENST00000430454 TMX4Q9H1E5 349 aaPredicted RBP11.89□□□□□ -0.51
HDAC9-211ENST00000430454 LAS1LQ9Y4W2 734 aaKnown RBP11.89□□□□□ -0.51
HDAC9-211ENST00000430454 KDM3BQ7LBC6 1761 aa11.89□□□□□ -0.51
HDAC9-211ENST00000430454 BCORQ6W2J9 1755 aa11.88□□□□□ -0.51
HDAC9-211ENST00000430454 C21orf2O43822 256 aa11.88□□□□□ -0.51
HDAC9-211ENST00000430454 HOXB7P09629 217 aa11.88□□□□□ -0.51
HDAC9-211ENST00000430454 TAOK3Q9H2K8 898 aa11.88□□□□□ -0.51
HDAC9-211ENST00000430454 DLEC1Q9Y238 1755 aa11.87□□□□□ -0.51
HDAC9-211ENST00000430454 FAM177BA6PVY3 158 aa11.87□□□□□ -0.51
HDAC9-211ENST00000430454 CHL1O00533 1208 aa11.87□□□□□ -0.51
HDAC9-211ENST00000430454 KIF3CO14782 793 aa11.87□□□□□ -0.51
HDAC9-211ENST00000430454 HLFQ16534 295 aa11.87□□□□□ -0.51
HDAC9-211ENST00000430454 GRIPAP1Q4V328 841 aa11.87□□□□□ -0.51
HDAC9-211ENST00000430454 CCDC93Q567U6 631 aa11.87□□□□□ -0.51
HDAC9-211ENST00000430454 PRPF40BQ6NWY9 871 aaKnown RBP11.87□□□□□ -0.51
HDAC9-211ENST00000430454 RTKN2Q8IZC4 609 aa11.87□□□□□ -0.51
HDAC9-211ENST00000430454 CCDC24Q8N4L8 307 aa11.87□□□□□ -0.51
HDAC9-211ENST00000430454 RPGRQ92834 1020 aaKnown RBP11.87□□□□□ -0.51
HDAC9-211ENST00000430454 IBTKQ9P2D0 1353 aaPredicted RBP11.87□□□□□ -0.51
HDAC9-211ENST00000430454 RNF123Q5XPI4 1314 aa11.86□□□□□ -0.51
HDAC9-211ENST00000430454 LTBP3Q9NS15 1303 aa11.86□□□□□ -0.51
HDAC9-211ENST00000430454 KLRG2A4D1S0 409 aaPredicted RBP11.86□□□□□ -0.51
HDAC9-211ENST00000430454 HSPA6P17066 643 aa11.86□□□□□ -0.51
HDAC9-211ENST00000430454 GNAI1P63096 354 aa11.86□□□□□ -0.51
HDAC9-211ENST00000430454 CC2D2BQ6DHV5 1058 aa11.86□□□□□ -0.51
HDAC9-211ENST00000430454 GIGYF2Q6Y7W6 1299 aaKnown RBP11.86□□□□□ -0.51
HDAC9-211ENST00000430454 RBM46Q8TBY0 533 aaKnown RBP11.86□□□□□ -0.51
HDAC9-211ENST00000430454 CFAP44Q96MT7 982 aa11.86□□□□□ -0.51
HDAC9-211ENST00000430454 ZBTB3Q9H5J0 574 aa11.86□□□□□ -0.51
HDAC9-211ENST00000430454 RTN4Q9NQC3 1192 aaKnown RBP11.86□□□□□ -0.51
HDAC9-211ENST00000430454 ZNF219Q9P2Y4 722 aaPredicted RBP11.86□□□□□ -0.51
HDAC9-211ENST00000430454 GLTPD2A6NH11 291 aa11.85□□□□□ -0.51
HDAC9-211ENST00000430454 ANP32CO43423 234 aa11.85□□□□□ -0.51
HDAC9-211ENST00000430454 VEGFAP15692 232 aaPredicted RBP11.85□□□□□ -0.51
HDAC9-211ENST00000430454 RASSF7Q02833 373 aa11.85□□□□□ -0.51
HDAC9-211ENST00000430454 FSTL1Q12841 308 aa11.85□□□□□ -0.51
HDAC9-211ENST00000430454 ERFEQ4G0M1 354 aa11.85□□□□□ -0.51
HDAC9-211ENST00000430454 TTLL7Q6ZT98 887 aa11.85□□□□□ -0.51
HDAC9-211ENST00000430454 DDX21Q9NR30 783 aaKnown RBP eCLIP11.85□□□□□ -0.51
HDAC9-211ENST00000430454 TRIM35Q9UPQ4 493 aa11.85□□□□□ -0.51
HDAC9-211ENST00000430454 NFKBIEO00221 500 aa11.84□□□□□ -0.51
HDAC9-211ENST00000430454 GPTP24298 496 aa11.84□□□□□ -0.51
HDAC9-211ENST00000430454 APLP1P51693 650 aa11.84□□□□□ -0.51
HDAC9-211ENST00000430454 HDGFL1Q5TGJ6 251 aa11.84□□□□□ -0.51
HDAC9-211ENST00000430454 RBM17Q96I25 401 aaKnown RBP11.84□□□□□ -0.51
HDAC9-211ENST00000430454 NLRP3Q96P20 1036 aa11.84□□□□□ -0.51
HDAC9-211ENST00000430454 UTP14AQ9BVJ6 771 aaKnown RBP11.84□□□□□ -0.51
HDAC9-211ENST00000430454 RRAGCQ9HB90 399 aa11.84□□□□□ -0.51
HDAC9-211ENST00000430454 NMRK2Q9NPI5 230 aa11.84□□□□□ -0.51
HDAC9-211ENST00000430454 IFT57Q9NWB7 429 aa11.84□□□□□ -0.51
HDAC9-211ENST00000430454 HYPKQ9NX55 129 aa11.84□□□□□ -0.51
HDAC9-211ENST00000430454 DBF4Q9UBU7 674 aaPredicted RBP11.84□□□□□ -0.51
HDAC9-211ENST00000430454 ZNF316A6NFI3 1004 aaPredicted RBP11.83□□□□□ -0.52
HDAC9-211ENST00000430454 APAF1O14727 1248 aa11.83□□□□□ -0.52
HDAC9-211ENST00000430454 HSP90B1P14625 803 aaKnown RBP11.83□□□□□ -0.52
HDAC9-211ENST00000430454 COPS6Q7L5N1 327 aa11.83□□□□□ -0.52
HDAC9-211ENST00000430454 ZNF34Q8IZ26 560 aa11.83□□□□□ -0.52
HDAC9-211ENST00000430454 ANKRD31Q8N7Z5 1873 aa11.83□□□□□ -0.52
HDAC9-211ENST00000430454 FKBP4Q02790 459 aaKnown RBP eCLIP11.82□□□□□ -0.52
HDAC9-211ENST00000430454 AIMP1Q12904 312 aaKnown RBP11.82□□□□□ -0.52
HDAC9-211ENST00000430454 PDIA6Q15084 440 aa11.82□□□□□ -0.52
HDAC9-211ENST00000430454 CRY2Q49AN0 593 aa11.82□□□□□ -0.52
HDAC9-211ENST00000430454 SUSD4Q5VX71 490 aa11.82□□□□□ -0.52
HDAC9-211ENST00000430454 SMC1BQ8NDV3 1235 aa11.82□□□□□ -0.52
HDAC9-211ENST00000430454 XAGE3Q8WTP9 111 aa11.82□□□□□ -0.52
HDAC9-211ENST00000430454 RIC1Q4ADV7 1423 aa11.82□□□□□ -0.52
HDAC9-211ENST00000430454 IQCA1LA6NCM1 817 aa11.81□□□□□ -0.52
HDAC9-211ENST00000430454 HOXA10P31260 410 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms