RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 ZNF165P49910 485 aa13.14□□□□□ -0.31
SEMA4D-209ENST00000429836 ST3GAL1Q11201 340 aa13.14□□□□□ -0.31
SEMA4D-209ENST00000429836 NME9Q86XW9 330 aa13.14□□□□□ -0.31
SEMA4D-209ENST00000429836 SYTL4Q96C24 671 aaPredicted RBP13.14□□□□□ -0.31
SEMA4D-209ENST00000429836 NOL10Q9BSC4 688 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-209ENST00000429836 HYPKQ9NX55 129 aa13.14□□□□□ -0.31
SEMA4D-209ENST00000429836 CPSF1Q10570 1443 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-209ENST00000429836 CDC37L1Q7L3B6 337 aa13.14□□□□□ -0.31
SEMA4D-209ENST00000429836 LRRC8AQ8IWT6 810 aa13.14□□□□□ -0.31
SEMA4D-209ENST00000429836 LSG1Q9H089 658 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-209ENST00000429836 STAP2Q9UGK3 403 aa13.14□□□□□ -0.31
SEMA4D-209ENST00000429836 CHL1O00533 1208 aa13.13□□□□□ -0.31
SEMA4D-209ENST00000429836 SGSM2O43147 1006 aa13.13□□□□□ -0.31
SEMA4D-209ENST00000429836 ADCK5Q3MIX3 580 aa13.13□□□□□ -0.31
SEMA4D-209ENST00000429836 CWC27Q6UX04 472 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-209ENST00000429836 AEBP2Q6ZN18 517 aaPredicted RBP13.13□□□□□ -0.31
SEMA4D-209ENST00000429836 LRRN4CLQ8ND94 238 aa13.13□□□□□ -0.31
SEMA4D-209ENST00000429836 TDRD7Q8NHU6 1098 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-209ENST00000429836 KRT85P78386 507 aa13.13□□□□□ -0.31
SEMA4D-209ENST00000429836 ERO1AQ96HE7 468 aa13.13□□□□□ -0.31
SEMA4D-209ENST00000429836 SKILP12757 684 aa13.12□□□□□ -0.31
SEMA4D-209ENST00000429836 NYAP1Q6ZVC0 841 aa13.12□□□□□ -0.31
SEMA4D-209ENST00000429836 PAXIP1Q6ZW49 1069 aaPredicted RBP13.12□□□□□ -0.31
SEMA4D-209ENST00000429836 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.12□□□□□ -0.31
SEMA4D-209ENST00000429836 GOLGA6L4A6NEF3 574 aa13.12□□□□□ -0.31
SEMA4D-209ENST00000429836 CYP2C19P33261 490 aa13.12□□□□□ -0.31
SEMA4D-209ENST00000429836 ERCC6LQ2NKX8 1250 aa13.12□□□□□ -0.31
SEMA4D-209ENST00000429836 LARP1BQ659C4 914 aaKnown RBP13.12□□□□□ -0.31
SEMA4D-209ENST00000429836 FILIP1Q7Z7B0 1213 aa13.12□□□□□ -0.31
SEMA4D-209ENST00000429836 KIF1BPQ96EK5 621 aa13.12□□□□□ -0.31
SEMA4D-209ENST00000429836 JAKMIP1Q96N16 626 aaKnown RBP13.12□□□□□ -0.31
SEMA4D-209ENST00000429836 USP16Q9Y5T5 823 aa13.12□□□□□ -0.31
SEMA4D-209ENST00000429836 CCDC171Q6TFL3 1326 aa13.11□□□□□ -0.31
SEMA4D-209ENST00000429836 A0A087WWV3 80 aa13.11□□□□□ -0.31
SEMA4D-209ENST00000429836 NR1I2O75469 434 aa13.11□□□□□ -0.31
SEMA4D-209ENST00000429836 CCT4P50991 539 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-209ENST00000429836 ME3Q16798 604 aa13.11□□□□□ -0.31
SEMA4D-209ENST00000429836 TAF7LQ5H9L4 462 aa13.11□□□□□ -0.31
SEMA4D-209ENST00000429836 PDRG1Q9NUG6 133 aa13.11□□□□□ -0.31
SEMA4D-209ENST00000429836 LRRFIP2Q9Y608 721 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-209ENST00000429836 SLU7O95391 586 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-209ENST00000429836 SLC20A2Q08357 652 aa13.11□□□□□ -0.31
SEMA4D-209ENST00000429836 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
SEMA4D-209ENST00000429836 PTPRMP28827 1452 aa13.11□□□□□ -0.31
SEMA4D-209ENST00000429836 NEO1Q92859 1461 aa13.11□□□□□ -0.31
SEMA4D-209ENST00000429836 ATP8B2P98198 1209 aa13.1□□□□□ -0.31
SEMA4D-209ENST00000429836 COL9A3Q14050 684 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-209ENST00000429836 SULT6B1Q6IMI4 303 aa13.1□□□□□ -0.31
SEMA4D-209ENST00000429836 ZBTB9Q96C00 473 aa13.1□□□□□ -0.31
SEMA4D-209ENST00000429836 CCDC69A6NI79 296 aa13.1□□□□□ -0.31
SEMA4D-209ENST00000429836 NEK11Q8NG66 645 aa13.1□□□□□ -0.31
SEMA4D-209ENST00000429836 FEZ2Q9UHY8 353 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-209ENST00000429836 HAP1P54257 671 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-209ENST00000429836 PRPF40BQ6NWY9 871 aaKnown RBP13.1□□□□□ -0.31
SEMA4D-209ENST00000429836 SPATA32Q96LK8 384 aa13.1□□□□□ -0.31
SEMA4D-209ENST00000429836 CLSTN2Q9H4D0 955 aa13.1□□□□□ -0.31
SEMA4D-209ENST00000429836 FHOD1Q9Y613 1164 aa13.1□□□□□ -0.31
SEMA4D-209ENST00000429836 NEXMIFQ5QGS0 1516 aa13.1□□□□□ -0.31
SEMA4D-209ENST00000429836 LMTK2Q8IWU2 1503 aa13.1□□□□□ -0.31
SEMA4D-209ENST00000429836 POLR3GO15318 223 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-209ENST00000429836 PTH1RQ03431 593 aa13.09□□□□□ -0.31
SEMA4D-209ENST00000429836 RAD51AP2Q09MP3 1159 aa13.09□□□□□ -0.31
SEMA4D-209ENST00000429836 CDK12Q9NYV4 1490 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-209ENST00000429836 BMS1Q14692 1282 aaKnown RBP13.09□□□□□ -0.31
SEMA4D-209ENST00000429836 C11orf57Q6ZUT1 292 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-209ENST00000429836 BICD2Q8TD16 824 aa13.09□□□□□ -0.31
SEMA4D-209ENST00000429836 ZFP91Q96JP5 570 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-209ENST00000429836 CLCN6P51797 869 aa13.08□□□□□ -0.32
SEMA4D-209ENST00000429836 CCZ1BP86790 482 aa13.08□□□□□ -0.32
SEMA4D-209ENST00000429836 CCZ1P86791 482 aaPredicted RBP13.08□□□□□ -0.32
SEMA4D-209ENST00000429836 SLFNL1Q499Z3 407 aa13.08□□□□□ -0.32
SEMA4D-209ENST00000429836 CCAR2Q8N163 923 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-209ENST00000429836 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
SEMA4D-209ENST00000429836 PI4K2BQ8TCG2 481 aa13.08□□□□□ -0.32
SEMA4D-209ENST00000429836 TCEANC2Q96MN5 208 aa13.08□□□□□ -0.32
SEMA4D-209ENST00000429836 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.08□□□□□ -0.32
SEMA4D-209ENST00000429836 TTC21AQ8NDW8 1320 aa13.08□□□□□ -0.32
SEMA4D-209ENST00000429836 GOLGA6L19H0YKK7 550 aa13.08□□□□□ -0.32
SEMA4D-209ENST00000429836 PLA2G4AP47712 749 aa13.08□□□□□ -0.32
SEMA4D-209ENST00000429836 IDI1Q13907 227 aa13.08□□□□□ -0.32
SEMA4D-209ENST00000429836 TPCN1Q9ULQ1 816 aa13.08□□□□□ -0.32
SEMA4D-209ENST00000429836 LEO1Q8WVC0 666 aaPredicted RBP13.07□□□□□ -0.32
SEMA4D-209ENST00000429836 PGBD1Q96JS3 809 aa13.07□□□□□ -0.32
SEMA4D-209ENST00000429836 DDX19AQ9NUU7 478 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-209ENST00000429836 PNMA6AP0CW24 399 aaPredicted RBP13.07□□□□□ -0.32
SEMA4D-209ENST00000429836 H2AFXP16104 143 aaPredicted RBP13.07□□□□□ -0.32
SEMA4D-209ENST00000429836 FBXW7Q969H0 707 aa13.07□□□□□ -0.32
SEMA4D-209ENST00000429836 ELP1O95163 1332 aa13.07□□□□□ -0.32
SEMA4D-209ENST00000429836 POGZQ7Z3K3 1410 aa13.07□□□□□ -0.32
SEMA4D-209ENST00000429836 SURF6O75683 361 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 IQCB1Q15051 598 aa13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 GORABQ5T7V8 394 aa13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 VPS53Q5VIR6 699 aa13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 RBM43Q6ZSC3 357 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 WAPLQ7Z5K2 1190 aa13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 CYP46A1Q9Y6A2 500 aa13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 KIDINS220Q9ULH0 1771 aa13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 PREX1Q8TCU6 1659 aa13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 FRMPD1Q5SYB0 1578 aa13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 GNAI3P08754 354 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms