RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 ANKRD13DQ6ZTN6 518 aa19.19■□□□□ 0.66
GARNL3-204ENST00000429629 XAGE3Q8WTP9 111 aa19.19■□□□□ 0.66
GARNL3-204ENST00000429629 BRPF1P55201 1214 aaPredicted RBP19.18■□□□□ 0.66
GARNL3-204ENST00000429629 GIGYF2Q6Y7W6 1299 aaKnown RBP19.18■□□□□ 0.66
GARNL3-204ENST00000429629 TTLL7Q6ZT98 887 aa19.18■□□□□ 0.66
GARNL3-204ENST00000429629 PLBD2Q8NHP8 589 aa19.18■□□□□ 0.66
GARNL3-204ENST00000429629 LAMB4A4D0S4 1761 aa19.18■□□□□ 0.66
GARNL3-204ENST00000429629 DDX58O95786 925 aaKnown RBP19.17■□□□□ 0.66
GARNL3-204ENST00000429629 ANXA1P04083 346 aa19.17■□□□□ 0.66
GARNL3-204ENST00000429629 HSP90AB3PQ58FF7 597 aa19.17■□□□□ 0.66
GARNL3-204ENST00000429629 ARXQ96QS3 562 aa19.17■□□□□ 0.66
GARNL3-204ENST00000429629 MMP10P09238 476 aa19.15■□□□□ 0.66
GARNL3-204ENST00000429629 NFIXQ14938 502 aa19.15■□□□□ 0.66
GARNL3-204ENST00000429629 SETDB2Q96T68 719 aa19.15■□□□□ 0.66
GARNL3-204ENST00000429629 AIMP1Q12904 312 aaKnown RBP19.14■□□□□ 0.65
GARNL3-204ENST00000429629 TRIM28Q13263 835 aaKnown RBP19.14■□□□□ 0.65
GARNL3-204ENST00000429629 MSL1Q68DK7 614 aa19.14■□□□□ 0.65
GARNL3-204ENST00000429629 PHAXQ9H814 394 aaKnown RBP19.14■□□□□ 0.65
GARNL3-204ENST00000429629 PARP3Q9Y6F1 533 aa19.14■□□□□ 0.65
GARNL3-204ENST00000429629 POLRMTO00411 1230 aaKnown RBP19.13■□□□□ 0.65
GARNL3-204ENST00000429629 TCIRG1Q13488 830 aa19.13■□□□□ 0.65
GARNL3-204ENST00000429629 HLFQ16534 295 aa19.13■□□□□ 0.65
GARNL3-204ENST00000429629 TBC1D9BQ66K14 1250 aa19.13■□□□□ 0.65
GARNL3-204ENST00000429629 KSR2Q6VAB6 950 aa19.13■□□□□ 0.65
GARNL3-204ENST00000429629 ZNF34Q8IZ26 560 aa19.13■□□□□ 0.65
GARNL3-204ENST00000429629 ATP10DQ9P241 1426 aa19.13■□□□□ 0.65
GARNL3-204ENST00000429629 TUBGCP6Q96RT7 1819 aa19.12■□□□□ 0.65
GARNL3-204ENST00000429629 FLIIQ13045 1269 aa19.12■□□□□ 0.65
GARNL3-204ENST00000429629 SSH1Q8WYL5 1049 aa19.12■□□□□ 0.65
GARNL3-204ENST00000429629 ZBTB3Q9H5J0 574 aa19.12■□□□□ 0.65
GARNL3-204ENST00000429629 RARSP54136 660 aaKnown RBP19.11■□□□□ 0.65
GARNL3-204ENST00000429629 DDR1Q08345 913 aa19.11■□□□□ 0.65
GARNL3-204ENST00000429629 PARP10Q53GL7 1025 aa19.11■□□□□ 0.65
GARNL3-204ENST00000429629 MRPL50Q8N5N7 158 aaKnown RBP19.11■□□□□ 0.65
GARNL3-204ENST00000429629 CD2APQ9Y5K6 639 aa19.11■□□□□ 0.65
GARNL3-204ENST00000429629 CARMIL3Q8ND23 1372 aa19.1■□□□□ 0.65
GARNL3-204ENST00000429629 TCERG1O14776 1098 aaKnown RBP19.1■□□□□ 0.65
GARNL3-204ENST00000429629 SERPINB2P05120 415 aa19.1■□□□□ 0.65
GARNL3-204ENST00000429629 G2E3Q7L622 706 aa19.1■□□□□ 0.65
GARNL3-204ENST00000429629 RIC3Q7Z5B4 369 aa19.1■□□□□ 0.65
GARNL3-204ENST00000429629 NIP7Q9Y221 180 aaKnown RBP eCLIP19.1■□□□□ 0.65
GARNL3-204ENST00000429629 COL24A1Q17RW2 1714 aa19.1■□□□□ 0.65
GARNL3-204ENST00000429629 SRCAPQ6ZRS2 3230 aa19.09■□□□□ 0.65
GARNL3-204ENST00000429629 PTPRCP08575 1304 aa19.09■□□□□ 0.65
GARNL3-204ENST00000429629 PI4KAP2A4QPH2 592 aa19.09■□□□□ 0.65
GARNL3-204ENST00000429629 TPTE2Q6XPS3 522 aa19.09■□□□□ 0.65
GARNL3-204ENST00000429629 PI4KAP1Q8N8J0 262 aa19.09■□□□□ 0.65
GARNL3-204ENST00000429629 ISCA1Q9BUE6 129 aa19.09■□□□□ 0.65
GARNL3-204ENST00000429629 METTL22Q9BUU2 404 aaPredicted RBP19.09■□□□□ 0.65
GARNL3-204ENST00000429629 IBTKQ9P2D0 1353 aaPredicted RBP19.08■□□□□ 0.65
GARNL3-204ENST00000429629 RNF123Q5XPI4 1314 aa19.08■□□□□ 0.65
GARNL3-204ENST00000429629 ARHGAP45Q92619 1136 aa19.08■□□□□ 0.64
GARNL3-204ENST00000429629 NYXQ9GZU5 481 aa19.08■□□□□ 0.64
GARNL3-204ENST00000429629 PPP1R1BQ9UD71 204 aaPredicted RBP19.08■□□□□ 0.64
GARNL3-204ENST00000429629 FKBP5Q13451 457 aaPredicted RBP19.07■□□□□ 0.64
GARNL3-204ENST00000429629 PPP1R42Q7Z4L9 355 aa19.07■□□□□ 0.64
GARNL3-204ENST00000429629 SMC4Q9NTJ3 1288 aa19.07■□□□□ 0.64
GARNL3-204ENST00000429629 PDZRN3Q9UPQ7 1066 aa19.07■□□□□ 0.64
GARNL3-204ENST00000429629 C4AP0C0L4 1744 aa19.07■□□□□ 0.64
GARNL3-204ENST00000429629 LRP5O75197 1615 aa19.07■□□□□ 0.64
GARNL3-204ENST00000429629 TGFB2P61812 414 aa19.06■□□□□ 0.64
GARNL3-204ENST00000429629 BICDL1Q6ZP65 573 aa19.06■□□□□ 0.64
GARNL3-204ENST00000429629 CCDC191Q8NCU4 936 aa19.06■□□□□ 0.64
GARNL3-204ENST00000429629 MAP3K2Q9Y2U5 619 aa19.06■□□□□ 0.64
GARNL3-204ENST00000429629 NEXNQ0ZGT2 675 aa19.05■□□□□ 0.64
GARNL3-204ENST00000429629 NLRP10Q86W26 655 aa19.05■□□□□ 0.64
GARNL3-204ENST00000429629 NBPF5PQ86XG9 351 aaPredicted RBP19.05■□□□□ 0.64
GARNL3-204ENST00000429629 DNAAF4Q8WXU2 420 aa19.05■□□□□ 0.64
GARNL3-204ENST00000429629 BRIP1Q9BX63 1249 aa19.05■□□□□ 0.64
GARNL3-204ENST00000429629 ADCY9O60503 1353 aa19.05■□□□□ 0.64
GARNL3-204ENST00000429629 SLC10A5Q5PT55 438 aa19.04■□□□□ 0.64
GARNL3-204ENST00000429629 SCN7AQ01118 1682 aa19.04■□□□□ 0.64
GARNL3-204ENST00000429629 UBN2Q6ZU65 1347 aa19.03■□□□□ 0.64
GARNL3-204ENST00000429629 KIF16BQ96L93 1317 aa19.03■□□□□ 0.64
GARNL3-204ENST00000429629 IPO8O15397 1037 aaKnown RBP19.03■□□□□ 0.64
GARNL3-204ENST00000429629 SUSD4Q5VX71 490 aa19.03■□□□□ 0.64
GARNL3-204ENST00000429629 PRR5LQ6MZQ0 368 aa19.03■□□□□ 0.64
GARNL3-204ENST00000429629 CNBD1Q8NA66 436 aa19.03■□□□□ 0.64
GARNL3-204ENST00000429629 LINS1Q8NG48 757 aa19.03■□□□□ 0.64
GARNL3-204ENST00000429629 SYT17Q9BSW7 474 aa19.03■□□□□ 0.64
GARNL3-204ENST00000429629 UTP14AQ9BVJ6 771 aaKnown RBP19.03■□□□□ 0.64
GARNL3-204ENST00000429629 KLRG2A4D1S0 409 aaPredicted RBP19.02■□□□□ 0.64
GARNL3-204ENST00000429629 NTSR2O95665 410 aa19.02■□□□□ 0.64
GARNL3-204ENST00000429629 GPTP24298 496 aa19.02■□□□□ 0.64
GARNL3-204ENST00000429629 ST5P78524 1137 aa19.02■□□□□ 0.64
GARNL3-204ENST00000429629 API5Q9BZZ5 524 aaKnown RBP19.02■□□□□ 0.64
GARNL3-204ENST00000429629 FHDC1Q9C0D6 1143 aaPredicted RBP19.02■□□□□ 0.64
GARNL3-204ENST00000429629 C10orf71Q711Q0 1435 aa19.01■□□□□ 0.63
GARNL3-204ENST00000429629 HSP90B1P14625 803 aaKnown RBP19.01■□□□□ 0.63
GARNL3-204ENST00000429629 PDE6BP35913 854 aa19.01■□□□□ 0.63
GARNL3-204ENST00000429629 MYD88Q99836 296 aa19.01■□□□□ 0.63
GARNL3-204ENST00000429629 ALDH1L1O75891 902 aa19■□□□□ 0.63
GARNL3-204ENST00000429629 IGKV5-2P06315 115 aa19■□□□□ 0.63
GARNL3-204ENST00000429629 BEND3Q5T5X7 828 aa19■□□□□ 0.63
GARNL3-204ENST00000429629 ZBTB38Q8NAP3 1195 aaPredicted RBP19■□□□□ 0.63
GARNL3-204ENST00000429629 YTHDC1Q96MU7 727 aaKnown RBP19■□□□□ 0.63
GARNL3-204ENST00000429629 CWC25Q9NXE8 425 aaPredicted RBP19■□□□□ 0.63
GARNL3-204ENST00000429629 NOB1Q9ULX3 412 aaKnown RBP19■□□□□ 0.63
GARNL3-204ENST00000429629 BCORQ6W2J9 1755 aa19■□□□□ 0.63
GARNL3-204ENST00000429629 NEURL1BA8MQ27 555 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms