RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 MASTLQ96GX5 879 aa17.49■□□□□ 0.39
HLA-F-219ENST00000429294 PCNTO95613 3336 aa17.49■□□□□ 0.39
HLA-F-219ENST00000429294 LTBP3Q9NS15 1303 aa17.48■□□□□ 0.39
HLA-F-219ENST00000429294 SIPA1L3O60292 1781 aaPredicted RBP17.48■□□□□ 0.39
HLA-F-219ENST00000429294 KCNQ3O43525 872 aa17.48■□□□□ 0.39
HLA-F-219ENST00000429294 USP16Q9Y5T5 823 aa17.48■□□□□ 0.39
HLA-F-219ENST00000429294 TIAM2Q8IVF5 1701 aa17.47■□□□□ 0.39
HLA-F-219ENST00000429294 SRGNP10124 158 aa17.47■□□□□ 0.39
HLA-F-219ENST00000429294 PRPF40BQ6NWY9 871 aaKnown RBP17.47■□□□□ 0.39
HLA-F-219ENST00000429294 ANKRD31Q8N7Z5 1873 aa17.47■□□□□ 0.39
HLA-F-219ENST00000429294 NEFMP07197 916 aa17.46■□□□□ 0.39
HLA-F-219ENST00000429294 TPTE2Q6XPS3 522 aa17.46■□□□□ 0.39
HLA-F-219ENST00000429294 MCM10Q7L590 875 aa17.46■□□□□ 0.39
HLA-F-219ENST00000429294 HTATSF1O43719 755 aaKnown RBP17.45■□□□□ 0.38
HLA-F-219ENST00000429294 FER1L6Q2WGJ9 1857 aa17.44■□□□□ 0.38
HLA-F-219ENST00000429294 POTECB2RU33 542 aa17.44■□□□□ 0.38
HLA-F-219ENST00000429294 RGL2O15211 777 aa17.44■□□□□ 0.38
HLA-F-219ENST00000429294 NPR1P16066 1061 aa17.44■□□□□ 0.38
HLA-F-219ENST00000429294 PPP2R1AP30153 589 aa17.44■□□□□ 0.38
HLA-F-219ENST00000429294 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
HLA-F-219ENST00000429294 DICER1Q9UPY3 1922 aaKnown RBP17.44■□□□□ 0.38
HLA-F-219ENST00000429294 IQCA1LA6NCM1 817 aa17.43■□□□□ 0.38
HLA-F-219ENST00000429294 GTF2E1P29083 439 aaPredicted RBP17.43■□□□□ 0.38
HLA-F-219ENST00000429294 CCDC93Q567U6 631 aa17.43■□□□□ 0.38
HLA-F-219ENST00000429294 COL13A1Q5TAT6 717 aaPredicted RBP17.43■□□□□ 0.38
HLA-F-219ENST00000429294 CHADLQ6NUI6 762 aa17.43■□□□□ 0.38
HLA-F-219ENST00000429294 NIP7Q9Y221 180 aaKnown RBP eCLIP17.43■□□□□ 0.38
HLA-F-219ENST00000429294 COL11A2P13942 1736 aaPredicted RBP17.42■□□□□ 0.38
HLA-F-219ENST00000429294 PRAMEF22A3QJZ6 481 aa17.42■□□□□ 0.38
HLA-F-219ENST00000429294 DDNO94850 711 aaPredicted RBP17.42■□□□□ 0.38
HLA-F-219ENST00000429294 TAF7Q15545 349 aaPredicted RBP17.42■□□□□ 0.38
HLA-F-219ENST00000429294 SLX4Q8IY92 1834 aa17.42■□□□□ 0.38
HLA-F-219ENST00000429294 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
HLA-F-219ENST00000429294 ALDH1B1P30837 517 aa17.4■□□□□ 0.38
HLA-F-219ENST00000429294 DCTN1Q14203 1278 aa17.4■□□□□ 0.38
HLA-F-219ENST00000429294 RTKN2Q8IZC4 609 aa17.4■□□□□ 0.38
HLA-F-219ENST00000429294 TNS4Q8IZW8 715 aa17.4■□□□□ 0.38
HLA-F-219ENST00000429294 FAM177BA6PVY3 158 aa17.39■□□□□ 0.37
HLA-F-219ENST00000429294 HSPA1AP0DMV8 641 aaKnown RBP17.39■□□□□ 0.37
HLA-F-219ENST00000429294 HSPA1BP0DMV9 641 aaKnown RBP17.39■□□□□ 0.37
HLA-F-219ENST00000429294 PNISRQ8TF01 805 aaKnown RBP17.39■□□□□ 0.37
HLA-F-219ENST00000429294 CREBZFQ9NS37 354 aa17.39■□□□□ 0.37
HLA-F-219ENST00000429294 CACNA1SQ13698 1873 aa17.38■□□□□ 0.37
HLA-F-219ENST00000429294 KLRG2A4D1S0 409 aaPredicted RBP17.38■□□□□ 0.37
HLA-F-219ENST00000429294 NBPF26B4DH59 902 aa17.38■□□□□ 0.37
HLA-F-219ENST00000429294 FKBP4Q02790 459 aaKnown RBP eCLIP17.38■□□□□ 0.37
HLA-F-219ENST00000429294 NBPF10Q6P3W6 841 aaKnown RBP17.38■□□□□ 0.37
HLA-F-219ENST00000429294 NBPF15Q8N660 670 aa17.38■□□□□ 0.37
HLA-F-219ENST00000429294 C7orf43Q8WVR3 580 aa17.38■□□□□ 0.37
HLA-F-219ENST00000429294 NYXQ9GZU5 481 aa17.38■□□□□ 0.37
HLA-F-219ENST00000429294 LDHDQ86WU2 507 aa17.37■□□□□ 0.37
HLA-F-219ENST00000429294 L3MBTL3Q96JM7 780 aaPredicted RBP17.37■□□□□ 0.37
HLA-F-219ENST00000429294 ARFGEF2Q9Y6D5 1785 aa17.37■□□□□ 0.37
HLA-F-219ENST00000429294 ZNF277Q9NRM2 450 aaPredicted RBP17.36■□□□□ 0.37
HLA-F-219ENST00000429294 MIS18AQ9NYP9 233 aa17.36■□□□□ 0.37
HLA-F-219ENST00000429294 CAPN15O75808 1086 aa17.35■□□□□ 0.37
HLA-F-219ENST00000429294 KIF6Q6ZMV9 814 aa17.35■□□□□ 0.37
HLA-F-219ENST00000429294 NGEFQ8N5V2 710 aa17.35■□□□□ 0.37
HLA-F-219ENST00000429294 PNNQ9H307 717 aaKnown RBP17.35■□□□□ 0.37
HLA-F-219ENST00000429294 TAF1DQ9H5J8 278 aaPredicted RBP17.35■□□□□ 0.37
HLA-F-219ENST00000429294 ERVV-1B6SEH8 477 aa17.34■□□□□ 0.37
HLA-F-219ENST00000429294 POTEIP0CG38 1075 aa17.34■□□□□ 0.37
HLA-F-219ENST00000429294 POTEJP0CG39 1038 aa17.34■□□□□ 0.37
HLA-F-219ENST00000429294 HLFQ16534 295 aa17.34■□□□□ 0.37
HLA-F-219ENST00000429294 EAPPQ56P03 285 aaPredicted RBP17.34■□□□□ 0.37
HLA-F-219ENST00000429294 CC2D2BQ6DHV5 1058 aa17.34■□□□□ 0.37
HLA-F-219ENST00000429294 JDP2Q8WYK2 163 aa17.34■□□□□ 0.37
HLA-F-219ENST00000429294 MKRN1Q9UHC7 482 aaKnown RBP17.34■□□□□ 0.37
HLA-F-219ENST00000429294 HACL1Q9UJ83 578 aa17.34■□□□□ 0.37
HLA-F-219ENST00000429294 CLEC11AQ9Y240 323 aa17.34■□□□□ 0.37
HLA-F-219ENST00000429294 RRP7AQ9Y3A4 280 aaKnown RBP17.34■□□□□ 0.37
HLA-F-219ENST00000429294 SCN4AP35499 1836 aa17.33■□□□□ 0.37
HLA-F-219ENST00000429294 IARSP41252 1262 aaKnown RBP17.33■□□□□ 0.36
HLA-F-219ENST00000429294 SYNE4Q8N205 404 aa17.33■□□□□ 0.36
HLA-F-219ENST00000429294 RPGRQ92834 1020 aaKnown RBP17.33■□□□□ 0.36
HLA-F-219ENST00000429294 PNMA8AQ86V59 439 aaPredicted RBP17.32■□□□□ 0.36
HLA-F-219ENST00000429294 MAP3K15Q6ZN16 1313 aa17.31■□□□□ 0.36
HLA-F-219ENST00000429294 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
HLA-F-219ENST00000429294 EPHX2P34913 555 aa17.31■□□□□ 0.36
HLA-F-219ENST00000429294 GRIPAP1Q4V328 841 aa17.31■□□□□ 0.36
HLA-F-219ENST00000429294 OLFM4Q6UX06 510 aa17.31■□□□□ 0.36
HLA-F-219ENST00000429294 ZNF541Q9H0D2 1346 aa17.3■□□□□ 0.36
HLA-F-219ENST00000429294 TMEM88BA6NKF7 163 aa17.3■□□□□ 0.36
HLA-F-219ENST00000429294 MYL6BP14649 208 aa17.3■□□□□ 0.36
HLA-F-219ENST00000429294 EIF4A1P60842 406 aaKnown RBP17.3■□□□□ 0.36
HLA-F-219ENST00000429294 NFE2L2Q16236 605 aa17.3■□□□□ 0.36
HLA-F-219ENST00000429294 CRY2Q49AN0 593 aa17.3■□□□□ 0.36
HLA-F-219ENST00000429294 NUTM1Q86Y26 1132 aa17.3■□□□□ 0.36
HLA-F-219ENST00000429294 GPC2Q8N158 579 aa17.3■□□□□ 0.36
HLA-F-219ENST00000429294 PSMD1Q99460 953 aa17.3■□□□□ 0.36
HLA-F-219ENST00000429294 TMX4Q9H1E5 349 aaPredicted RBP17.3■□□□□ 0.36
HLA-F-219ENST00000429294 PASKQ96RG2 1323 aa17.29■□□□□ 0.36
HLA-F-219ENST00000429294 FZD9O00144 591 aa17.29■□□□□ 0.36
HLA-F-219ENST00000429294 EIF6P56537 245 aaKnown RBP17.29■□□□□ 0.36
HLA-F-219ENST00000429294 AIDAQ96BJ3 306 aa17.29■□□□□ 0.36
HLA-F-219ENST00000429294 CNTNAP1P78357 1384 aa17.28■□□□□ 0.36
HLA-F-219ENST00000429294 LAMB4A4D0S4 1761 aa17.28■□□□□ 0.36
HLA-F-219ENST00000429294 GPTP24298 496 aa17.28■□□□□ 0.36
HLA-F-219ENST00000429294 LMOD1P29536 600 aaPredicted RBP17.28■□□□□ 0.36
HLA-F-219ENST00000429294 RBM17Q96I25 401 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms