RNA–Protein interactions for RNA: ENST00000428969.1

PCCA-206, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-206ENST00000428969 MASTLQ96GX5 879 aa17.45■□□□□ 0.38
PCCA-206ENST00000428969 A1BGP04217 495 aa17.44■□□□□ 0.38
PCCA-206ENST00000428969 PRPF40BQ6NWY9 871 aaKnown RBP17.44■□□□□ 0.38
PCCA-206ENST00000428969 CLEC4GQ6UXB4 293 aa17.44■□□□□ 0.38
PCCA-206ENST00000428969 DZIP3Q86Y13 1208 aaKnown RBP17.44■□□□□ 0.38
PCCA-206ENST00000428969 ZNF219Q9P2Y4 722 aaPredicted RBP17.44■□□□□ 0.38
PCCA-206ENST00000428969 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
PCCA-206ENST00000428969 IQCA1LA6NCM1 817 aa17.43■□□□□ 0.38
PCCA-206ENST00000428969 BTBD11A6QL63 1104 aa17.43■□□□□ 0.38
PCCA-206ENST00000428969 RGL2O15211 777 aa17.43■□□□□ 0.38
PCCA-206ENST00000428969 CAPN15O75808 1086 aa17.42■□□□□ 0.38
PCCA-206ENST00000428969 CCDC24Q8N4L8 307 aa17.42■□□□□ 0.38
PCCA-206ENST00000428969 ZNF652Q9Y2D9 606 aa17.42■□□□□ 0.38
PCCA-206ENST00000428969 CACNA1SQ13698 1873 aa17.41■□□□□ 0.38
PCCA-206ENST00000428969 DDNO94850 711 aaPredicted RBP17.41■□□□□ 0.38
PCCA-206ENST00000428969 L3MBTL3Q96JM7 780 aaPredicted RBP17.41■□□□□ 0.38
PCCA-206ENST00000428969 SCN4AP35499 1836 aa17.41■□□□□ 0.38
PCCA-206ENST00000428969 CCDC93Q567U6 631 aa17.4■□□□□ 0.38
PCCA-206ENST00000428969 LDHDQ86WU2 507 aa17.4■□□□□ 0.38
PCCA-206ENST00000428969 NBPF5PQ86XG9 351 aaPredicted RBP17.4■□□□□ 0.38
PCCA-206ENST00000428969 C7orf43Q8WVR3 580 aa17.4■□□□□ 0.38
PCCA-206ENST00000428969 NPR1P16066 1061 aa17.39■□□□□ 0.37
PCCA-206ENST00000428969 CFAP53Q96M91 514 aa17.39■□□□□ 0.37
PCCA-206ENST00000428969 KLRG2A4D1S0 409 aaPredicted RBP17.38■□□□□ 0.37
PCCA-206ENST00000428969 SNRPA1P09661 255 aaKnown RBP17.38■□□□□ 0.37
PCCA-206ENST00000428969 PRKAR2BP31323 418 aa17.38■□□□□ 0.37
PCCA-206ENST00000428969 RSPH6AQ9H0K4 717 aa17.38■□□□□ 0.37
PCCA-206ENST00000428969 USP16Q9Y5T5 823 aa17.38■□□□□ 0.37
PCCA-206ENST00000428969 PASKQ96RG2 1323 aa17.38■□□□□ 0.37
PCCA-206ENST00000428969 CNTNAP1P78357 1384 aa17.38■□□□□ 0.37
PCCA-206ENST00000428969 KCNQ3O43525 872 aa17.37■□□□□ 0.37
PCCA-206ENST00000428969 FKBP4Q02790 459 aaKnown RBP eCLIP17.37■□□□□ 0.37
PCCA-206ENST00000428969 TPTE2Q6XPS3 522 aa17.37■□□□□ 0.37
PCCA-206ENST00000428969 RTF1Q92541 710 aaKnown RBP17.37■□□□□ 0.37
PCCA-206ENST00000428969 PHACTR3Q96KR7 559 aa17.37■□□□□ 0.37
PCCA-206ENST00000428969 TAF1DQ9H5J8 278 aaPredicted RBP17.37■□□□□ 0.37
PCCA-206ENST00000428969 MKRN1Q9UHC7 482 aaKnown RBP17.37■□□□□ 0.37
PCCA-206ENST00000428969 NUDCQ9Y266 331 aa17.37■□□□□ 0.37
PCCA-206ENST00000428969 POTEIP0CG38 1075 aa17.36■□□□□ 0.37
PCCA-206ENST00000428969 POTEJP0CG39 1038 aa17.36■□□□□ 0.37
PCCA-206ENST00000428969 RTKN2Q8IZC4 609 aa17.36■□□□□ 0.37
PCCA-206ENST00000428969 HTATSF1O43719 755 aaKnown RBP17.34■□□□□ 0.37
PCCA-206ENST00000428969 NIP7Q9Y221 180 aaKnown RBP eCLIP17.34■□□□□ 0.37
PCCA-206ENST00000428969 TMEM88BA6NKF7 163 aa17.33■□□□□ 0.36
PCCA-206ENST00000428969 ALDH1B1P30837 517 aa17.33■□□□□ 0.36
PCCA-206ENST00000428969 PIP4K2AP48426 406 aaPredicted RBP17.33■□□□□ 0.36
PCCA-206ENST00000428969 PNMA8AQ86V59 439 aaPredicted RBP17.33■□□□□ 0.36
PCCA-206ENST00000428969 PRDM10Q9NQV6 1147 aa17.33■□□□□ 0.36
PCCA-206ENST00000428969 HACL1Q9UJ83 578 aa17.33■□□□□ 0.36
PCCA-206ENST00000428969 PRAMEF22A3QJZ6 481 aa17.32■□□□□ 0.36
PCCA-206ENST00000428969 ZNF277Q9NRM2 450 aaPredicted RBP17.32■□□□□ 0.36
PCCA-206ENST00000428969 ADAMTSL1Q8N6G6 1762 aa17.31■□□□□ 0.36
PCCA-206ENST00000428969 ZNF541Q9H0D2 1346 aa17.31■□□□□ 0.36
PCCA-206ENST00000428969 NBPF26B4DH59 902 aa17.31■□□□□ 0.36
PCCA-206ENST00000428969 ITGBL1O95965 494 aaPredicted RBP17.31■□□□□ 0.36
PCCA-206ENST00000428969 CNGB1Q14028 1251 aaPredicted RBP17.31■□□□□ 0.36
PCCA-206ENST00000428969 NBPF10Q6P3W6 841 aaKnown RBP17.31■□□□□ 0.36
PCCA-206ENST00000428969 NBPF15Q8N660 670 aa17.31■□□□□ 0.36
PCCA-206ENST00000428969 AIDAQ96BJ3 306 aa17.31■□□□□ 0.36
PCCA-206ENST00000428969 FZD9O00144 591 aa17.3■□□□□ 0.36
PCCA-206ENST00000428969 FOXN1O15353 648 aa17.3■□□□□ 0.36
PCCA-206ENST00000428969 U2AF1L5P0DN76 240 aaPredicted RBP17.3■□□□□ 0.36
PCCA-206ENST00000428969 EPHX2P34913 555 aa17.3■□□□□ 0.36
PCCA-206ENST00000428969 IARSP41252 1262 aaKnown RBP17.3■□□□□ 0.36
PCCA-206ENST00000428969 U2AF1Q01081 240 aaKnown RBP eCLIP17.3■□□□□ 0.36
PCCA-206ENST00000428969 EAPPQ56P03 285 aaPredicted RBP17.3■□□□□ 0.36
PCCA-206ENST00000428969 MCM10Q7L590 875 aa17.3■□□□□ 0.36
PCCA-206ENST00000428969 GTF2E1P29083 439 aaPredicted RBP17.29■□□□□ 0.36
PCCA-206ENST00000428969 CTCFP49711 727 aaPredicted RBP17.29■□□□□ 0.36
PCCA-206ENST00000428969 CC2D2BQ6DHV5 1058 aa17.29■□□□□ 0.36
PCCA-206ENST00000428969 GPC2Q8N158 579 aa17.29■□□□□ 0.36
PCCA-206ENST00000428969 PSMD1Q99460 953 aa17.29■□□□□ 0.36
PCCA-206ENST00000428969 NYXQ9GZU5 481 aa17.29■□□□□ 0.36
PCCA-206ENST00000428969 LAMB4A4D0S4 1761 aa17.29■□□□□ 0.36
PCCA-206ENST00000428969 VEGFBP49765 207 aa17.28■□□□□ 0.36
PCCA-206ENST00000428969 TAF7Q15545 349 aaPredicted RBP17.28■□□□□ 0.36
PCCA-206ENST00000428969 CRY2Q49AN0 593 aa17.28■□□□□ 0.36
PCCA-206ENST00000428969 GRIPAP1Q4V328 841 aa17.28■□□□□ 0.36
PCCA-206ENST00000428969 JDP2Q8WYK2 163 aa17.28■□□□□ 0.36
PCCA-206ENST00000428969 CLEC11AQ9Y240 323 aa17.28■□□□□ 0.36
PCCA-206ENST00000428969 SNED1Q8TER0 1413 aa17.28■□□□□ 0.36
PCCA-206ENST00000428969 RASSF10A6NK89 507 aa17.27■□□□□ 0.36
PCCA-206ENST00000428969 ERVV-1B6SEH8 477 aa17.27■□□□□ 0.36
PCCA-206ENST00000428969 SYNE4Q8N205 404 aa17.27■□□□□ 0.36
PCCA-206ENST00000428969 RNF123Q5XPI4 1314 aa17.26■□□□□ 0.35
PCCA-206ENST00000428969 HLFQ16534 295 aa17.26■□□□□ 0.35
PCCA-206ENST00000428969 OLFM4Q6UX06 510 aa17.26■□□□□ 0.35
PCCA-206ENST00000428969 CNTROBQ8N137 903 aa17.26■□□□□ 0.35
PCCA-206ENST00000428969 PNISRQ8TF01 805 aaKnown RBP17.26■□□□□ 0.35
PCCA-206ENST00000428969 WBP1LQ9NX94 342 aa17.26■□□□□ 0.35
PCCA-206ENST00000428969 RIC1Q4ADV7 1423 aa17.26■□□□□ 0.35
PCCA-206ENST00000428969 IBTKQ9P2D0 1353 aaPredicted RBP17.26■□□□□ 0.35
PCCA-206ENST00000428969 FAM177BA6PVY3 158 aa17.25■□□□□ 0.35
PCCA-206ENST00000428969 PPP2R1AP30153 589 aa17.25■□□□□ 0.35
PCCA-206ENST00000428969 DCTN1Q14203 1278 aa17.25■□□□□ 0.35
PCCA-206ENST00000428969 EIF6P56537 245 aaKnown RBP17.24■□□□□ 0.35
PCCA-206ENST00000428969 DEFB115Q30KQ5 88 aa17.24■□□□□ 0.35
PCCA-206ENST00000428969 NUP98P52948 1817 aa17.24■□□□□ 0.35
PCCA-206ENST00000428969 MAP3K15Q6ZN16 1313 aa17.23■□□□□ 0.35
PCCA-206ENST00000428969 NEFMP07197 916 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms