RNA–Protein interactions for RNA: ENST00000428895.1

BX088651.4-202, humanhuman

TSL 1 (best) BASIC

Gene BX088651.4, Length 1,479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BX088651.4-202ENST00000428895 DDX21Q9NR30 783 aaKnown RBP eCLIP16.61■□□□□ 0.25
BX088651.4-202ENST00000428895 DBF4Q9UBU7 674 aaPredicted RBP16.61■□□□□ 0.25
BX088651.4-202ENST00000428895 VAMP4O75379 141 aa16.61■□□□□ 0.25
BX088651.4-202ENST00000428895 NLGN1Q8N2Q7 840 aa16.61■□□□□ 0.25
BX088651.4-202ENST00000428895 CHMP4AQ9BY43 222 aa16.61■□□□□ 0.25
BX088651.4-202ENST00000428895 NARFQ9UHQ1 456 aa16.61■□□□□ 0.25
BX088651.4-202ENST00000428895 MMP10P09238 476 aa16.6■□□□□ 0.25
BX088651.4-202ENST00000428895 AIMP1Q12904 312 aaKnown RBP16.6■□□□□ 0.25
BX088651.4-202ENST00000428895 YY1P25490 414 aa16.59■□□□□ 0.25
BX088651.4-202ENST00000428895 TTLL7Q6ZT98 887 aa16.59■□□□□ 0.25
BX088651.4-202ENST00000428895 LRP10Q7Z4F1 713 aa16.59■□□□□ 0.25
BX088651.4-202ENST00000428895 STK31Q9BXU1 1019 aa16.59■□□□□ 0.25
BX088651.4-202ENST00000428895 KIAA1551Q9HCM1 1747 aa16.58■□□□□ 0.24
BX088651.4-202ENST00000428895 FKBP8Q14318 412 aa16.58■□□□□ 0.24
BX088651.4-202ENST00000428895 COPS6Q7L5N1 327 aa16.58■□□□□ 0.24
BX088651.4-202ENST00000428895 XAGE3Q8WTP9 111 aa16.58■□□□□ 0.24
BX088651.4-202ENST00000428895 HYPKQ9NX55 129 aa16.58■□□□□ 0.24
BX088651.4-202ENST00000428895 UTRNP46939 3433 aa16.57■□□□□ 0.24
BX088651.4-202ENST00000428895 CAMTA2O94983 1202 aa16.57■□□□□ 0.24
BX088651.4-202ENST00000428895 KIF6Q6ZMV9 814 aa16.57■□□□□ 0.24
BX088651.4-202ENST00000428895 PHAXQ9H814 394 aaKnown RBP16.57■□□□□ 0.24
BX088651.4-202ENST00000428895 BCL2L12Q9HB09 334 aa16.57■□□□□ 0.24
BX088651.4-202ENST00000428895 C10orf71Q711Q0 1435 aa16.57■□□□□ 0.24
BX088651.4-202ENST00000428895 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
BX088651.4-202ENST00000428895 GPR162Q16538 588 aa16.56■□□□□ 0.24
BX088651.4-202ENST00000428895 ZBTB3Q9H5J0 574 aa16.56■□□□□ 0.24
BX088651.4-202ENST00000428895 ARFGEF2Q9Y6D5 1785 aa16.56■□□□□ 0.24
BX088651.4-202ENST00000428895 ANKRD36CQ5JPF3 1778 aa16.55■□□□□ 0.24
BX088651.4-202ENST00000428895 AFDNP55196 1824 aaKnown RBP16.55■□□□□ 0.24
BX088651.4-202ENST00000428895 MAP3K15Q6ZN16 1313 aa16.55■□□□□ 0.24
BX088651.4-202ENST00000428895 YBX3P16989 372 aaKnown RBP eCLIP16.54■□□□□ 0.24
BX088651.4-202ENST00000428895 HLFQ16534 295 aa16.54■□□□□ 0.24
BX088651.4-202ENST00000428895 BICDL1Q6ZP65 573 aa16.54■□□□□ 0.24
BX088651.4-202ENST00000428895 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
BX088651.4-202ENST00000428895 GOLGB1Q14789 3259 aaKnown RBP16.54■□□□□ 0.24
BX088651.4-202ENST00000428895 POTEDQ86YR6 584 aa16.54■□□□□ 0.24
BX088651.4-202ENST00000428895 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
BX088651.4-202ENST00000428895 BRCA1P38398 1863 aaKnown RBP16.53■□□□□ 0.24
BX088651.4-202ENST00000428895 ERVV-1B6SEH8 477 aa16.53■□□□□ 0.24
BX088651.4-202ENST00000428895 TM4SF1P30408 202 aa16.53■□□□□ 0.24
BX088651.4-202ENST00000428895 DDR1Q08345 913 aa16.53■□□□□ 0.24
BX088651.4-202ENST00000428895 TBC1D9BQ66K14 1250 aa16.53■□□□□ 0.24
BX088651.4-202ENST00000428895 G2E3Q7L622 706 aa16.53■□□□□ 0.24
BX088651.4-202ENST00000428895 N4BP2Q86UW6 1770 aaPredicted RBP16.52■□□□□ 0.24
BX088651.4-202ENST00000428895 GRIN3BO60391 1043 aa16.52■□□□□ 0.23
BX088651.4-202ENST00000428895 NFIXQ14938 502 aa16.52■□□□□ 0.23
BX088651.4-202ENST00000428895 CLEC4GQ6UXB4 293 aa16.52■□□□□ 0.23
BX088651.4-202ENST00000428895 ANKRD13DQ6ZTN6 518 aa16.52■□□□□ 0.23
BX088651.4-202ENST00000428895 PELP1Q8IZL8 1130 aaKnown RBP16.52■□□□□ 0.23
BX088651.4-202ENST00000428895 PARP3Q9Y6F1 533 aa16.52■□□□□ 0.23
BX088651.4-202ENST00000428895 CT47B1P0C2W7 299 aaPredicted RBP16.51■□□□□ 0.23
BX088651.4-202ENST00000428895 GIGYF2Q6Y7W6 1299 aaKnown RBP16.51■□□□□ 0.23
BX088651.4-202ENST00000428895 SETDB2Q96T68 719 aa16.51■□□□□ 0.23
BX088651.4-202ENST00000428895 BCL2L13Q9BXK5 485 aa16.51■□□□□ 0.23
BX088651.4-202ENST00000428895 NRXN2Q9P2S2 1712 aa16.51■□□□□ 0.23
BX088651.4-202ENST00000428895 POLRMTO00411 1230 aaKnown RBP16.5■□□□□ 0.23
BX088651.4-202ENST00000428895 TGFB2P61812 414 aa16.5■□□□□ 0.23
BX088651.4-202ENST00000428895 FLIIQ13045 1269 aa16.5■□□□□ 0.23
BX088651.4-202ENST00000428895 RIC3Q7Z5B4 369 aa16.5■□□□□ 0.23
BX088651.4-202ENST00000428895 PLBD2Q8NHP8 589 aa16.5■□□□□ 0.23
BX088651.4-202ENST00000428895 SSH1Q8WYL5 1049 aa16.5■□□□□ 0.23
BX088651.4-202ENST00000428895 ZNF428Q96B54 188 aa16.5■□□□□ 0.23
BX088651.4-202ENST00000428895 NIP7Q9Y221 180 aaKnown RBP eCLIP16.5■□□□□ 0.23
BX088651.4-202ENST00000428895 RGL2O15211 777 aa16.49■□□□□ 0.23
BX088651.4-202ENST00000428895 DDX58O95786 925 aaKnown RBP16.49■□□□□ 0.23
BX088651.4-202ENST00000428895 GPTP24298 496 aa16.49■□□□□ 0.23
BX088651.4-202ENST00000428895 ARFGEF1Q9Y6D6 1849 aa16.49■□□□□ 0.23
BX088651.4-202ENST00000428895 FKBP5Q13451 457 aaPredicted RBP16.48■□□□□ 0.23
BX088651.4-202ENST00000428895 ALDH1L2Q3SY69 923 aa16.48■□□□□ 0.23
BX088651.4-202ENST00000428895 MRPL50Q8N5N7 158 aaKnown RBP16.48■□□□□ 0.23
BX088651.4-202ENST00000428895 SMC4Q9NTJ3 1288 aa16.48■□□□□ 0.23
BX088651.4-202ENST00000428895 CARMIL3Q8ND23 1372 aa16.48■□□□□ 0.23
BX088651.4-202ENST00000428895 PI4KAP2A4QPH2 592 aa16.48■□□□□ 0.23
BX088651.4-202ENST00000428895 FAM177BA6PVY3 158 aa16.48■□□□□ 0.23
BX088651.4-202ENST00000428895 PI4KAP1Q8N8J0 262 aa16.48■□□□□ 0.23
BX088651.4-202ENST00000428895 ATP10DQ9P241 1426 aa16.47■□□□□ 0.23
BX088651.4-202ENST00000428895 SERPINB2P05120 415 aa16.47■□□□□ 0.23
BX088651.4-202ENST00000428895 RARSP54136 660 aaKnown RBP16.47■□□□□ 0.23
BX088651.4-202ENST00000428895 HSP90AB3PQ58FF7 597 aa16.47■□□□□ 0.23
BX088651.4-202ENST00000428895 KSR2Q6VAB6 950 aa16.47■□□□□ 0.23
BX088651.4-202ENST00000428895 MAP3K2Q9Y2U5 619 aa16.47■□□□□ 0.23
BX088651.4-202ENST00000428895 NPHP1O15259 732 aa16.46■□□□□ 0.23
BX088651.4-202ENST00000428895 TCIRG1Q13488 830 aa16.46■□□□□ 0.23
BX088651.4-202ENST00000428895 ZNF34Q8IZ26 560 aa16.46■□□□□ 0.23
BX088651.4-202ENST00000428895 ADCY9O60503 1353 aa16.46■□□□□ 0.22
BX088651.4-202ENST00000428895 DLEC1Q9Y238 1755 aa16.45■□□□□ 0.22
BX088651.4-202ENST00000428895 UBN2Q6ZU65 1347 aa16.45■□□□□ 0.22
BX088651.4-202ENST00000428895 ATP5J2-PTCD1G3V325 749 aa16.45■□□□□ 0.22
BX088651.4-202ENST00000428895 KCNA3P22001 575 aa16.45■□□□□ 0.22
BX088651.4-202ENST00000428895 NBPF5PQ86XG9 351 aaPredicted RBP16.45■□□□□ 0.22
BX088651.4-202ENST00000428895 MYD88Q99836 296 aa16.45■□□□□ 0.22
BX088651.4-202ENST00000428895 A0A0G2JLW4 131 aa16.44■□□□□ 0.22
BX088651.4-202ENST00000428895 DPEP1P16444 411 aa16.44■□□□□ 0.22
BX088651.4-202ENST00000428895 CCDC24Q8N4L8 307 aa16.44■□□□□ 0.22
BX088651.4-202ENST00000428895 ANKRD31Q8N7Z5 1873 aa16.44■□□□□ 0.22
BX088651.4-202ENST00000428895 F6X3S4 739 aa16.43■□□□□ 0.22
BX088651.4-202ENST00000428895 BCAR3O75815 825 aa16.43■□□□□ 0.22
BX088651.4-202ENST00000428895 SUSD4Q5VX71 490 aa16.43■□□□□ 0.22
BX088651.4-202ENST00000428895 ZNF784Q8NCA9 323 aaPredicted RBP16.43■□□□□ 0.22
BX088651.4-202ENST00000428895 METTL22Q9BUU2 404 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms