RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 ZNF652Q9Y2D9 606 aa18.71■□□□□ 0.59
SGCE-204ENST00000428696 PARP3Q9Y6F1 533 aa18.71■□□□□ 0.59
SGCE-204ENST00000428696 NPHP1O15259 732 aa18.7■□□□□ 0.58
SGCE-204ENST00000428696 CAMTA2O94983 1202 aa18.7■□□□□ 0.58
SGCE-204ENST00000428696 CICQ96RK0 1608 aaPredicted RBP18.69■□□□□ 0.58
SGCE-204ENST00000428696 FAM177BA6PVY3 158 aa18.69■□□□□ 0.58
SGCE-204ENST00000428696 HLFQ16534 295 aa18.69■□□□□ 0.58
SGCE-204ENST00000428696 PHAXQ9H814 394 aaKnown RBP18.69■□□□□ 0.58
SGCE-204ENST00000428696 BCL2L12Q9HB09 334 aa18.69■□□□□ 0.58
SGCE-204ENST00000428696 CASZ1Q86V15 1759 aa18.68■□□□□ 0.58
SGCE-204ENST00000428696 TBC1D9BQ66K14 1250 aa18.68■□□□□ 0.58
SGCE-204ENST00000428696 SETDB2Q96T68 719 aa18.68■□□□□ 0.58
SGCE-204ENST00000428696 ZBED9Q6R2W3 1325 aa18.67■□□□□ 0.58
SGCE-204ENST00000428696 MAP3K15Q6ZN16 1313 aa18.67■□□□□ 0.58
SGCE-204ENST00000428696 NFIXQ14938 502 aa18.67■□□□□ 0.58
SGCE-204ENST00000428696 GPTP24298 496 aa18.66■□□□□ 0.58
SGCE-204ENST00000428696 ANKRD13DQ6ZTN6 518 aa18.66■□□□□ 0.58
SGCE-204ENST00000428696 RIC3Q7Z5B4 369 aa18.66■□□□□ 0.58
SGCE-204ENST00000428696 ZNF428Q96B54 188 aa18.66■□□□□ 0.58
SGCE-204ENST00000428696 NIP7Q9Y221 180 aaKnown RBP eCLIP18.66■□□□□ 0.58
SGCE-204ENST00000428696 QSER1Q2KHR3 1735 aa18.66■□□□□ 0.58
SGCE-204ENST00000428696 LRP10Q7Z4F1 713 aa18.66■□□□□ 0.58
SGCE-204ENST00000428696 TRMT2AQ8IZ69 625 aaKnown RBP18.66■□□□□ 0.58
SGCE-204ENST00000428696 SGIP1Q9BQI5 828 aa18.66■□□□□ 0.58
SGCE-204ENST00000428696 LAMB4A4D0S4 1761 aa18.65■□□□□ 0.58
SGCE-204ENST00000428696 ERVV-1B6SEH8 477 aa18.65■□□□□ 0.58
SGCE-204ENST00000428696 TM4SF1P30408 202 aa18.65■□□□□ 0.58
SGCE-204ENST00000428696 CLEC4GQ6UXB4 293 aa18.65■□□□□ 0.58
SGCE-204ENST00000428696 BCL2L13Q9BXK5 485 aa18.65■□□□□ 0.58
SGCE-204ENST00000428696 DDX58O95786 925 aaKnown RBP18.64■□□□□ 0.57
SGCE-204ENST00000428696 SERPINB2P05120 415 aa18.64■□□□□ 0.57
SGCE-204ENST00000428696 GTF2E1P29083 439 aaPredicted RBP18.64■□□□□ 0.57
SGCE-204ENST00000428696 DDR1Q08345 913 aa18.64■□□□□ 0.57
SGCE-204ENST00000428696 MAPK8IP2Q13387 824 aaPredicted RBP18.64■□□□□ 0.57
SGCE-204ENST00000428696 G2E3Q7L622 706 aa18.64■□□□□ 0.57
SGCE-204ENST00000428696 CCDC24Q8N4L8 307 aa18.64■□□□□ 0.57
SGCE-204ENST00000428696 FHDC1Q9C0D6 1143 aaPredicted RBP18.64■□□□□ 0.57
SGCE-204ENST00000428696 PLBD2Q8NHP8 589 aa18.63■□□□□ 0.57
SGCE-204ENST00000428696 POLRMTO00411 1230 aaKnown RBP18.62■□□□□ 0.57
SGCE-204ENST00000428696 FKBP5Q13451 457 aaPredicted RBP18.62■□□□□ 0.57
SGCE-204ENST00000428696 GIGYF2Q6Y7W6 1299 aaKnown RBP18.62■□□□□ 0.57
SGCE-204ENST00000428696 NBPF5PQ86XG9 351 aaPredicted RBP18.62■□□□□ 0.57
SGCE-204ENST00000428696 C4AP0C0L4 1744 aa18.62■□□□□ 0.57
SGCE-204ENST00000428696 SMC4Q9NTJ3 1288 aa18.61■□□□□ 0.57
SGCE-204ENST00000428696 ATP5J2-PTCD1G3V325 749 aa18.6■□□□□ 0.57
SGCE-204ENST00000428696 FLIIQ13045 1269 aa18.6■□□□□ 0.57
SGCE-204ENST00000428696 MAP3K2Q9Y2U5 619 aa18.6■□□□□ 0.57
SGCE-204ENST00000428696 PI4KAP2A4QPH2 592 aa18.59■□□□□ 0.57
SGCE-204ENST00000428696 HSP90AB3PQ58FF7 597 aa18.59■□□□□ 0.57
SGCE-204ENST00000428696 PI4KAP1Q8N8J0 262 aa18.59■□□□□ 0.57
SGCE-204ENST00000428696 SSH1Q8WYL5 1049 aa18.59■□□□□ 0.57
SGCE-204ENST00000428696 MYD88Q99836 296 aa18.59■□□□□ 0.57
SGCE-204ENST00000428696 WWC3Q9ULE0 1092 aa18.59■□□□□ 0.57
SGCE-204ENST00000428696 TCIRG1Q13488 830 aa18.58■□□□□ 0.57
SGCE-204ENST00000428696 KSR2Q6VAB6 950 aa18.58■□□□□ 0.57
SGCE-204ENST00000428696 TPTE2Q6XPS3 522 aa18.58■□□□□ 0.57
SGCE-204ENST00000428696 PELP1Q8IZL8 1130 aaKnown RBP18.58■□□□□ 0.57
SGCE-204ENST00000428696 CNBD1Q8NA66 436 aa18.58■□□□□ 0.57
SGCE-204ENST00000428696 CARMIL3Q8ND23 1372 aa18.58■□□□□ 0.56
SGCE-204ENST00000428696 SYT17Q9BSW7 474 aa18.57■□□□□ 0.56
SGCE-204ENST00000428696 ST5P78524 1137 aa18.57■□□□□ 0.56
SGCE-204ENST00000428696 SUSD4Q5VX71 490 aa18.57■□□□□ 0.56
SGCE-204ENST00000428696 MRPL50Q8N5N7 158 aaKnown RBP18.57■□□□□ 0.56
SGCE-204ENST00000428696 RGL2O15211 777 aa18.56■□□□□ 0.56
SGCE-204ENST00000428696 CT47B1P0C2W7 299 aaPredicted RBP18.56■□□□□ 0.56
SGCE-204ENST00000428696 NEXNQ0ZGT2 675 aa18.56■□□□□ 0.56
SGCE-204ENST00000428696 RTL5Q5HYW3 569 aaPredicted RBP18.56■□□□□ 0.56
SGCE-204ENST00000428696 SLC4A10Q6U841 1118 aa18.56■□□□□ 0.56
SGCE-204ENST00000428696 PPP1R42Q7Z4L9 355 aa18.56■□□□□ 0.56
SGCE-204ENST00000428696 NUTM1Q86Y26 1132 aa18.56■□□□□ 0.56
SGCE-204ENST00000428696 ZNF34Q8IZ26 560 aa18.56■□□□□ 0.56
SGCE-204ENST00000428696 NLGN2Q8NFZ4 835 aa18.56■□□□□ 0.56
SGCE-204ENST00000428696 CD2APQ9Y5K6 639 aa18.56■□□□□ 0.56
SGCE-204ENST00000428696 A0A0G2JLW4 131 aa18.55■□□□□ 0.56
SGCE-204ENST00000428696 F6X3S4 739 aa18.55■□□□□ 0.56
SGCE-204ENST00000428696 PARP10Q53GL7 1025 aa18.55■□□□□ 0.56
SGCE-204ENST00000428696 PRR5LQ6MZQ0 368 aa18.55■□□□□ 0.56
SGCE-204ENST00000428696 UTP14AQ9BVJ6 771 aaKnown RBP18.55■□□□□ 0.56
SGCE-204ENST00000428696 NYXQ9GZU5 481 aa18.55■□□□□ 0.56
SGCE-204ENST00000428696 TRMT112Q9UI30 125 aaKnown RBP18.55■□□□□ 0.56
SGCE-204ENST00000428696 RARSP54136 660 aaKnown RBP18.54■□□□□ 0.56
SGCE-204ENST00000428696 ALDH1L2Q3SY69 923 aa18.54■□□□□ 0.56
SGCE-204ENST00000428696 NLRP10Q86W26 655 aa18.54■□□□□ 0.56
SGCE-204ENST00000428696 FRAT1Q92837 279 aaPredicted RBP18.54■□□□□ 0.56
SGCE-204ENST00000428696 METTL22Q9BUU2 404 aaPredicted RBP18.54■□□□□ 0.56
SGCE-204ENST00000428696 UBN2Q6ZU65 1347 aa18.54■□□□□ 0.56
SGCE-204ENST00000428696 ERFEQ4G0M1 354 aa18.53■□□□□ 0.56
SGCE-204ENST00000428696 DNAAF4Q8WXU2 420 aa18.53■□□□□ 0.56
SGCE-204ENST00000428696 NOB1Q9ULX3 412 aaKnown RBP18.53■□□□□ 0.56
SGCE-204ENST00000428696 BCAR3O75815 825 aa18.52■□□□□ 0.56
SGCE-204ENST00000428696 JARID2Q92833 1246 aaPredicted RBP18.52■□□□□ 0.56
SGCE-204ENST00000428696 LRP5O75197 1615 aa18.52■□□□□ 0.56
SGCE-204ENST00000428696 DCAF8L1A6NGE4 600 aa18.51■□□□□ 0.55
SGCE-204ENST00000428696 CHRNA5P30532 468 aa18.51■□□□□ 0.55
SGCE-204ENST00000428696 C2CD5Q86YS7 1000 aa18.51■□□□□ 0.55
SGCE-204ENST00000428696 SCN7AQ01118 1682 aa18.51■□□□□ 0.55
SGCE-204ENST00000428696 ADCY9O60503 1353 aa18.51■□□□□ 0.55
SGCE-204ENST00000428696 ATP10DQ9P241 1426 aa18.51■□□□□ 0.55
SGCE-204ENST00000428696 H0YIN7 160 aa18.5■□□□□ 0.55
SGCE-204ENST00000428696 DPEP1P16444 411 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms