RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 SOGA3Q5TF21 947 aa11.12□□□□□ -0.63
ITSN1-216ENST00000428240 OLFM4Q6UX06 510 aa11.12□□□□□ -0.63
ITSN1-216ENST00000428240 MASTLQ96GX5 879 aa11.12□□□□□ -0.63
ITSN1-216ENST00000428240 SETDB2Q96T68 719 aa11.12□□□□□ -0.63
ITSN1-216ENST00000428240 ZNF277Q9NRM2 450 aaPredicted RBP11.12□□□□□ -0.63
ITSN1-216ENST00000428240 HEG1Q9ULI3 1381 aa11.12□□□□□ -0.63
ITSN1-216ENST00000428240 EPHX2P34913 555 aa11.11□□□□□ -0.63
ITSN1-216ENST00000428240 ST5P78524 1137 aa11.11□□□□□ -0.63
ITSN1-216ENST00000428240 DEFB115Q30KQ5 88 aa11.11□□□□□ -0.63
ITSN1-216ENST00000428240 MAP1SQ66K74 1059 aaPredicted RBP11.11□□□□□ -0.63
ITSN1-216ENST00000428240 ZNF790Q6PG37 636 aa11.11□□□□□ -0.63
ITSN1-216ENST00000428240 CNTROBQ8N137 903 aa11.11□□□□□ -0.63
ITSN1-216ENST00000428240 HACL1Q9UJ83 578 aa11.11□□□□□ -0.63
ITSN1-216ENST00000428240 CLEC11AQ9Y240 323 aa11.11□□□□□ -0.63
ITSN1-216ENST00000428240 VIRMAQ69YN4 1812 aaKnown RBP11.11□□□□□ -0.63
ITSN1-216ENST00000428240 ADAMTSL1Q8N6G6 1762 aa11.11□□□□□ -0.63
ITSN1-216ENST00000428240 RNF123Q5XPI4 1314 aa11.1□□□□□ -0.63
ITSN1-216ENST00000428240 WDR33Q9C0J8 1336 aaKnown RBP11.1□□□□□ -0.63
ITSN1-216ENST00000428240 HSPA5P11021 654 aaKnown RBP11.1□□□□□ -0.63
ITSN1-216ENST00000428240 PIP4K2AP48426 406 aaPredicted RBP11.1□□□□□ -0.63
ITSN1-216ENST00000428240 FKBP4Q02790 459 aaKnown RBP eCLIP11.1□□□□□ -0.63
ITSN1-216ENST00000428240 CCDC93Q567U6 631 aa11.1□□□□□ -0.63
ITSN1-216ENST00000428240 IL17REQ8NFR9 667 aa11.1□□□□□ -0.63
ITSN1-216ENST00000428240 KNSTRNQ9Y448 316 aa11.1□□□□□ -0.63
ITSN1-216ENST00000428240 SCN4AP35499 1836 aa11.09□□□□□ -0.63
ITSN1-216ENST00000428240 CACNA1SQ13698 1873 aa11.09□□□□□ -0.63
ITSN1-216ENST00000428240 MAP2K1Q02750 393 aaPredicted RBP11.09□□□□□ -0.63
ITSN1-216ENST00000428240 FMR1Q06787 632 aaKnown RBP eCLIP11.09□□□□□ -0.63
ITSN1-216ENST00000428240 DZIP3Q86Y13 1208 aaKnown RBP11.09□□□□□ -0.63
ITSN1-216ENST00000428240 TEX13AQ9BXU3 409 aaPredicted RBP11.09□□□□□ -0.63
ITSN1-216ENST00000428240 ARFGEF2Q9Y6D5 1785 aa11.08□□□□□ -0.64
ITSN1-216ENST00000428240 KCNQ3O43525 872 aa11.08□□□□□ -0.64
ITSN1-216ENST00000428240 NPR1P16066 1061 aa11.08□□□□□ -0.64
ITSN1-216ENST00000428240 EIF4G2P78344 907 aaKnown RBP eCLIP11.08□□□□□ -0.64
ITSN1-216ENST00000428240 TEFQ10587 303 aa11.08□□□□□ -0.64
ITSN1-216ENST00000428240 AMER1Q5JTC6 1135 aaPredicted RBP11.08□□□□□ -0.64
ITSN1-216ENST00000428240 PNMA8AQ86V59 439 aaPredicted RBP11.08□□□□□ -0.64
ITSN1-216ENST00000428240 ABT1Q9ULW3 272 aaKnown RBP11.08□□□□□ -0.64
ITSN1-216ENST00000428240 KLRG2A4D1S0 409 aaPredicted RBP11.07□□□□□ -0.64
ITSN1-216ENST00000428240 CCDC85CA6NKD9 419 aa11.07□□□□□ -0.64
ITSN1-216ENST00000428240 FZD9O00144 591 aa11.07□□□□□ -0.64
ITSN1-216ENST00000428240 DIAPH1O60610 1272 aaKnown RBP11.07□□□□□ -0.64
ITSN1-216ENST00000428240 NPM2Q86SE8 214 aaKnown RBP11.07□□□□□ -0.64
ITSN1-216ENST00000428240 NBPF5PQ86XG9 351 aaPredicted RBP11.07□□□□□ -0.64
ITSN1-216ENST00000428240 FMNL2Q96PY5 1086 aa11.07□□□□□ -0.64
ITSN1-216ENST00000428240 DDX21Q9NR30 783 aaKnown RBP eCLIP11.07□□□□□ -0.64
ITSN1-216ENST00000428240 TIMELESSQ9UNS1 1208 aa11.07□□□□□ -0.64
ITSN1-216ENST00000428240 USP16Q9Y5T5 823 aa11.07□□□□□ -0.64
ITSN1-216ENST00000428240 BCORQ6W2J9 1755 aa11.06□□□□□ -0.64
ITSN1-216ENST00000428240 PRAMEF22A3QJZ6 481 aa11.06□□□□□ -0.64
ITSN1-216ENST00000428240 GNAT3A8MTJ3 354 aa11.06□□□□□ -0.64
ITSN1-216ENST00000428240 IARSP41252 1262 aaKnown RBP11.06□□□□□ -0.64
ITSN1-216ENST00000428240 MLLT1Q03111 559 aaPredicted RBP11.06□□□□□ -0.64
ITSN1-216ENST00000428240 RTKN2Q8IZC4 609 aa11.06□□□□□ -0.64
ITSN1-216ENST00000428240 SYNE4Q8N205 404 aa11.06□□□□□ -0.64
ITSN1-216ENST00000428240 FAM177BA6PVY3 158 aa11.05□□□□□ -0.64
ITSN1-216ENST00000428240 RGS19P49795 217 aa11.05□□□□□ -0.64
ITSN1-216ENST00000428240 GRM1Q13255 1194 aa11.05□□□□□ -0.64
ITSN1-216ENST00000428240 CYP4F22Q6NT55 531 aa11.05□□□□□ -0.64
ITSN1-216ENST00000428240 GPC2Q8N158 579 aa11.05□□□□□ -0.64
ITSN1-216ENST00000428240 CAPNS2Q96L46 248 aa11.05□□□□□ -0.64
ITSN1-216ENST00000428240 TSKSQ9UJT2 592 aa11.05□□□□□ -0.64
ITSN1-216ENST00000428240 COL4A5P29400 1685 aa11.04□□□□□ -0.64
ITSN1-216ENST00000428240 LTBP1Q14766 1721 aa11.04□□□□□ -0.64
ITSN1-216ENST00000428240 SNED1Q8TER0 1413 aa11.04□□□□□ -0.64
ITSN1-216ENST00000428240 SIPA1L3O60292 1781 aaPredicted RBP11.04□□□□□ -0.64
ITSN1-216ENST00000428240 BTBD11A6QL63 1104 aa11.04□□□□□ -0.64
ITSN1-216ENST00000428240 CST9Q5W186 159 aa11.04□□□□□ -0.64
ITSN1-216ENST00000428240 CLEC4GQ6UXB4 293 aa11.04□□□□□ -0.64
ITSN1-216ENST00000428240 PAXIP1Q6ZW49 1069 aaPredicted RBP11.04□□□□□ -0.64
ITSN1-216ENST00000428240 GPR101Q96P66 508 aaPredicted RBP11.04□□□□□ -0.64
ITSN1-216ENST00000428240 GJA3Q9Y6H8 435 aa11.04□□□□□ -0.64
ITSN1-216ENST00000428240 THSD7BQ9C0I4 1608 aa11.04□□□□□ -0.64
ITSN1-216ENST00000428240 CEMIPQ8WUJ3 1361 aa11.03□□□□□ -0.64
ITSN1-216ENST00000428240 TRAF5O00463 557 aa11.03□□□□□ -0.64
ITSN1-216ENST00000428240 U2SURPO15042 1029 aaKnown RBP11.03□□□□□ -0.64
ITSN1-216ENST00000428240 ALDH1B1P30837 517 aa11.03□□□□□ -0.64
ITSN1-216ENST00000428240 EPS15P42566 896 aa11.03□□□□□ -0.64
ITSN1-216ENST00000428240 TPTE2Q6XPS3 522 aa11.03□□□□□ -0.64
ITSN1-216ENST00000428240 SLC51AQ86UW1 340 aa11.03□□□□□ -0.64
ITSN1-216ENST00000428240 GAS2L2Q8NHY3 880 aa11.03□□□□□ -0.64
ITSN1-216ENST00000428240 NIP7Q9Y221 180 aaKnown RBP eCLIP11.03□□□□□ -0.64
ITSN1-216ENST00000428240 AOC2O75106 756 aa11.02□□□□□ -0.65
ITSN1-216ENST00000428240 SCNN1DP51172 638 aa11.02□□□□□ -0.65
ITSN1-216ENST00000428240 EIF6P56537 245 aaKnown RBP11.02□□□□□ -0.65
ITSN1-216ENST00000428240 HLFQ16534 295 aa11.02□□□□□ -0.65
ITSN1-216ENST00000428240 CC2D1BQ5T0F9 858 aaKnown RBP11.02□□□□□ -0.65
ITSN1-216ENST00000428240 JDP2Q8WYK2 163 aa11.02□□□□□ -0.65
ITSN1-216ENST00000428240 PSMD1Q99460 953 aa11.02□□□□□ -0.65
ITSN1-216ENST00000428240 BEGAINQ9BUH8 593 aa11.02□□□□□ -0.65
ITSN1-216ENST00000428240 ZNF652Q9Y2D9 606 aa11.02□□□□□ -0.65
ITSN1-216ENST00000428240 COL3A1P02461 1466 aaPredicted RBP11.01□□□□□ -0.65
ITSN1-216ENST00000428240 NBPF26B4DH59 902 aa11.01□□□□□ -0.65
ITSN1-216ENST00000428240 LMOD1P29536 600 aaPredicted RBP11.01□□□□□ -0.65
ITSN1-216ENST00000428240 ECE1P42892 770 aa11.01□□□□□ -0.65
ITSN1-216ENST00000428240 NBPF10Q6P3W6 841 aaKnown RBP11.01□□□□□ -0.65
ITSN1-216ENST00000428240 NBPF15Q8N660 670 aa11.01□□□□□ -0.65
ITSN1-216ENST00000428240 PHACTR3Q96KR7 559 aa11.01□□□□□ -0.65
ITSN1-216ENST00000428240 TLL2Q9Y6L7 1015 aa11.01□□□□□ -0.65
ITSN1-216ENST00000428240 PER1O15534 1290 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms